Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,610,107 C→T A192T (GCA→ACA)  uxaB ← altronate oxidoreductase, NAD‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,610,1070CT100.0% 127.4 / NA 40A192T (GCA→ACA) uxaBaltronate oxidoreductase, NAD‑dependent
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (17/23);  total (17/23)

AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGCCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATCCAACCTTTATCCAGCGCACCGTTGAAATGGCTAAAGCGTTCGAACAGCA  >  NC_000913/1609972‑1610235
                                                                                                                                       |                                                                                                                                
aaCCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCa                                                                                                                               <  2:1410622/139‑1 (MQ=255)
aaCCATCGTAATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCa                                                                                                                               <  1:734321/139‑1 (MQ=255)
 aCCATCGTGCTAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCAc                                                                                                                              >  1:1028757/1‑139 (MQ=255)
  ccATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCAct                                                                                                                             <  2:524533/139‑1 (MQ=255)
   cATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCActc                                                                                                                            >  2:60876/1‑139 (MQ=255)
           tAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCAt                                                                                                                    <  1:244992/139‑1 (MQ=255)
                              gTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATATCGCAGCACCAGTTCACg                                                                                                 <  2:878110/139‑1 (MQ=255)
                                        ttCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCg                                                                                       <  1:15665/139‑1 (MQ=255)
                                        ttCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCg                                                                                       >  1:805940/1‑139 (MQ=255)
                                         tCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGc                                                                                      >  2:1161305/1‑139 (MQ=255)
                                           aTCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCa                                                                                    <  1:60876/139‑1 (MQ=255)
                                                     tAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGtcaa                                                                          <  1:1161305/139‑1 (MQ=255)
                                                              aCGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTcac                                                                 >  1:280398/1‑139 (MQ=255)
                                                               cGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTCGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTACACGCAACGCGTCGCCATTGTAGACATTCAACTcaca                                                                <  2:1028757/139‑1 (MQ=255)
                                                               cGATACCGTCATCCAGCGTCGAACAGAAGCTGTTAGCATGATACAGCCATTCGATCAATGCTTCTATCAGTGTCCACACTTGCGTATAGCAGAGCACCAGTTCGCGCAACGCGACGCCAGTGTAGTCAATCACCTcaca                                                                <  2:1058189/139‑1 (MQ=255)
                                                                  tACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTcaca                                                                >  2:1523633/1‑136 (MQ=255)
                                                                  tACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTcaca                                                                <  1:1523633/136‑1 (MQ=255)
                                                                   aCGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGc                                                                                                <  1:115270/103‑1 (MQ=255)
                                                                   aCGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGc                                                                                                >  2:115270/1‑103 (MQ=255)
                                                                     ggTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAat                                                          <  2:280398/139‑1 (MQ=255)
                                                                             aGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATcc                                                  <  1:846348/139‑1 (MQ=255)
                                                                                 tAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATCCAAcc                                              >  1:8251/1‑139 (MQ=255)
                                                                                   gAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATcc                                                  <  1:1239339/133‑1 (MQ=255)
                                                                                   gAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATcc                                                  >  2:1239339/1‑133 (MQ=255)
                                                                                    aaCAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCa                                                                                    <  2:782872/98‑1 (MQ=255)
                                                                                    aaCAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCa                                                                                    >  1:782872/1‑98 (MQ=255)
                                                                                         aaGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCa                                                                                                                               <  1:578548/50‑1 (MQ=255)
                                                                                         aaGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCa                                                                                                                               >  2:578548/1‑50 (MQ=255)
                                                                                          aGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAAc                                                                     >  2:669118/1‑107 (MQ=255)
                                                                                          aGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAAc                                                                     <  1:669118/107‑1 (MQ=255)
                                                                                              gTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTca                                                                  <  2:1450690/106‑1 (MQ=255)
                                                                                              gTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTca                                                                  >  1:1450690/1‑106 (MQ=255)
                                                                                              gTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTAAATCAACTCACACGGAATGATGATCCAACCTTTATCCAGCGCa                                 >  2:1186922/1‑139 (MQ=255)
                                                                                                tAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATCCAACCTTTATCCAGCGCAcc                               <  2:8251/139‑1 (MQ=255)
                                                                                                         ccAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAg                                                                                                                  <  1:79948/47‑1 (MQ=255)
                                                                                                         ccAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAg                                                                                                                  >  2:79948/1‑47 (MQ=255)
                                                                                                         ccAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATcc                                                  <  2:519624/111‑1 (MQ=255)
                                                                                                         ccAGCCATTGAATAAATGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATcc                                                  >  1:519624/1‑111 (MQ=255)
                                                                                                                       aaTGCTTCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATCCAACCTTTATCCAGCGCACCGTTGAAATGGCTAAAGCGTTCGa        >  1:1069950/1‑139 (MQ=255)
                                                                                                                             tCTGGCAGTGTCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATCCAACCTTTATCCAGCGCACCGTTGAAATGGCTAAAGCGTTCGAAcagca  <  2:805940/139‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                
AACCATCGTGATAACCCAGTTCTTCTTCCAGTTTAGCCACTTCATCGCGCGGATAACCGGTAACGATACGGTCCACCAGCGTAGAACAGAAGCTGTTAGCCTGATCCAGCCATTGAATAAATGCTTCTGGCAGTGCCCACTCTTGCGCATAGCGCAGCACCAGTTCACGCAACGCGTCGCCATTGTAGTCAATCAACTCACACGGAATGATGATCCAACCTTTATCCAGCGCACCGTTGAAATGGCTAAAGCGTTCGAACAGCA  >  NC_000913/1609972‑1610235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑