| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,823,899 | G→A | V129M (GTG→ATG) | cho → | endonuclease of nucleotide excision repair |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,823,899 | 0 | G | A | 100.0% | 94.3 / NA | 31 | V129M (GTG→ATG) | cho | endonuclease of nucleotide excision repair |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (15/16); total (15/16) | |||||||||||
ATGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGC > NC_000913/1823763‑1824018 | atGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATgtgatg < 2:1414691/139‑1 (MQ=255) tGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACg < 2:363632/139‑1 (MQ=255) tGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGccccc > 2:1197269/1‑139 (MQ=255) aGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAagag < 1:591909/115‑1 (MQ=255) aGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAagag > 2:591909/1‑115 (MQ=255) cgcgATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa < 2:309814/136‑1 (MQ=255) cgcgATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa > 1:309814/1‑136 (MQ=255) cgcgATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa < 2:752715/136‑1 (MQ=255) cgcgATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa > 1:752715/1‑136 (MQ=255) cgcgATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCt > 1:416253/1‑139 (MQ=255) aaTCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGc < 2:416253/139‑1 (MQ=255) acaGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAAt < 1:1197269/139‑1 (MQ=255) ttAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACg < 1:833640/97‑1 (MQ=255) ttAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACg > 2:833640/1‑97 (MQ=255) ggTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACg < 2:156166/88‑1 (MQ=255) ggTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACg > 1:156166/1‑88 (MQ=255) cgccgcAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa > 1:273300/1‑92 (MQ=255) cgccgcAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa < 2:273300/92‑1 (MQ=255) tgCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa > 2:185548/1‑72 (MQ=255) tgCCCTGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCaa < 1:185548/72‑1 (MQ=255) tGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACaa > 1:90892/1‑134 (MQ=255) tGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACaa < 2:90892/134‑1 (MQ=255) tGCAATTAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACt > 2:641537/1‑139 (MQ=255) ttAAATGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGtt < 2:1220719/139‑1 (MQ=255) aaaTGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTAt > 1:526153/1‑139 (MQ=255) aaaTGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTCCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAAGAAAAACTTTGTTAt > 1:939233/1‑139 (MQ=255) tGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGc < 1:641537/139‑1 (MQ=255) tGAAAAGCGCGTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTCTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGc < 2:939233/139‑1 (MQ=255) cgTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACg > 2:196888/1‑39 (MQ=255) cgTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACg < 1:196888/39‑1 (MQ=255) gTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGt < 2:60830/61‑1 (MQ=255) gTCGATGTGATGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGt > 1:60830/1‑61 (MQ=255) | ATGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGC > NC_000913/1823763‑1824018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |