| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,365,284 | G→A | Q113* (CAG→TAG) | ais ← | putative LPS core heptose(II)‑phosphate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,365,284 | 0 | G | A | 100.0% | 237.6 / NA | 73 | Q113* (CAG→TAG) | ais | putative LPS core heptose(II)‑phosphate phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (33/40); total (33/40) | |||||||||||
GGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTG > NC_000913/2365150‑2365414 | ggTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATg > 1:601490/1‑139 (MQ=255) tGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGt < 2:847806/139‑1 (MQ=255) aaaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCg < 1:1073778/139‑1 (MQ=255) aaTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCgg < 2:1289457/139‑1 (MQ=255) aTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 1:604235/139‑1 (MQ=255) aTAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 1:484903/139‑1 (MQ=255) tAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGAc < 1:1162902/139‑1 (MQ=255) cGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGt > 1:26865/1‑139 (MQ=255) atTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTa < 2:26865/139‑1 (MQ=255) ttttATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACt < 2:601490/139‑1 (MQ=255) gcgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 1:1215779/120‑1 (MQ=255) gcgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa > 2:1215779/1‑120 (MQ=255) ctttgctttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTaaa > 2:1435793/1‑108 (MQ=255) ctttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAAt < 1:1292690/139‑1 (MQ=255) ttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCa > 1:1103900/1‑139 (MQ=255) ccTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATc > 2:479540/1‑139 (MQ=255) aTCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATc < 2:301619/122‑1 (MQ=255) aTCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATc > 1:301619/1‑122 (MQ=255) aTCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGc > 1:892872/1‑139 (MQ=255) aTTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 1:1224099/80‑1 (MQ=255) aTTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa > 2:1224099/1‑80 (MQ=255) aTTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATc > 2:32547/1‑102 (MQ=255) aTTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCATAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATc < 1:32547/102‑1 (MQ=255) ttACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGtt < 2:892872/139‑1 (MQ=255) tACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCgg > 1:1238051/1‑77 (MQ=255) tACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCgg < 2:1238051/77‑1 (MQ=255) tACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa > 1:1536224/1‑78 (MQ=255) tACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 2:1536224/78‑1 (MQ=255) tACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCg < 1:707216/101‑1 (MQ=255) tACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCg > 2:707216/1‑101 (MQ=255) cACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATaa < 1:1251942/90‑1 (MQ=255) cACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATaa > 2:1251942/1‑90 (MQ=255) cACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACgg < 2:1037063/138‑1 (MQ=255) cACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACgg > 1:1037063/1‑138 (MQ=255) cACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTCGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACgg < 2:532521/138‑1 (MQ=255) cACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTCGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACgg > 1:532521/1‑138 (MQ=255) aCTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTAt < 2:1346043/78‑1 (MQ=255) aCTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTAt > 1:1346043/1‑78 (MQ=255) cTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCa < 2:543985/139‑1 (MQ=255) tGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa > 1:1444670/1‑70 (MQ=255) tGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 2:1444670/70‑1 (MQ=255) tGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 2:877405/70‑1 (MQ=255) tGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa > 1:877405/1‑70 (MQ=255) tGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCAt > 1:1491076/1‑139 (MQ=255) aagaagTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa > 1:1294459/1‑68 (MQ=255) aagaagTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 2:1294459/68‑1 (MQ=255) aagTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTgg < 1:730249/139‑1 (MQ=255) agTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTggg < 1:479540/139‑1 (MQ=255) gTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGAc < 1:851615/64‑1 (MQ=255) gTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGAc > 2:851615/1‑64 (MQ=255) ttATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc < 2:1448165/113‑1 (MQ=255) ttATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc > 1:1448165/1‑113 (MQ=255) ttATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCtt > 2:909416/1‑139 (MQ=255) ttATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCtt > 2:436734/1‑139 (MQ=255) tCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGAc > 1:79052/1‑56 (MQ=255) tCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGAc < 2:79052/56‑1 (MQ=255) aCCGTCAATTTTTTACCCGCTGGAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCg < 1:128685/139‑1 (MQ=255) aCCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTAt > 1:439829/1‑58 (MQ=255) aCCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTAt < 2:439829/58‑1 (MQ=255) gTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTaa > 2:1171396/1‑139 (MQ=255) tCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa > 2:1402899/1‑48 (MQ=255) tCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGa < 1:1402899/48‑1 (MQ=255) tCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGccc > 1:266873/1‑104 (MQ=255) tCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGccc < 2:266873/104‑1 (MQ=255) tCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAAt > 2:1513662/1‑139 (MQ=255) cAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATa < 1:837477/139‑1 (MQ=255) gCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAg < 2:1101741/73‑1 (MQ=255) gCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAg > 1:1101741/1‑73 (MQ=255) gCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc > 2:984290/1‑89 (MQ=255) gCTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGcc < 1:984290/89‑1 (MQ=255) cTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGa < 1:909416/139‑1 (MQ=255) cTGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGa < 1:1171396/139‑1 (MQ=255) tGAAAACCAGGTAGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGAc < 1:1513662/139‑1 (MQ=255) aGCCGACTAAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCattgattg > 2:1439333/1‑139 (MQ=255) | GGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAACCAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTG > NC_000913/2365150‑2365414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |