Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,369,494	C→T	A307T (GCA→ACA)	yjeH ←	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,369,494	0	C	T	100.0%	268.3 / NA	86	A307T (GCA→ACA)	yjeH	putative transporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (44/42);  total (44/42)

AAAGATGCCATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGCCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAGGCAATCCATAACGC  >  NC_000913/4369360‑4369614                                                                                                                                       |                                                                                                                         aaaGATGCCATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAACACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAgg                                                                                                                      <  1:1035182/139‑1 (MQ=255)   aGATGCCATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTa                                                                                                                    <  2:1159943/139‑1 (MQ=255)   aGATGCCATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTa                                                                                                                    >  2:549508/1‑139 (MQ=255)       gCCATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTgg                                                                                                                >  1:409515/1‑139 (MQ=255)       gCCATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTgg                                                                                                                >  2:1342634/1‑139 (MQ=255)        ccATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGt                                                                                                               <  1:1342634/139‑1 (MQ=255)              gCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGAt                                                                                                         <  1:549508/139‑1 (MQ=255)                  aaataaTAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATg                                                                                                     >  2:617420/1‑139 (MQ=255)                        taaGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTgcgc                                                                                               >  1:771835/1‑139 (MQ=255)                        taaGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTgcgc                                                                                               >  2:358010/1‑139 (MQ=255)                         aaGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTa                                                                                                                    >  2:682890/1‑117 (MQ=255)                         aaGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTa                                                                                                                    <  1:682890/117‑1 (MQ=255)                             gCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCg                                                                                          >  2:530870/1‑139 (MQ=255)                              cGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCga                                                                                         >  1:471517/1‑139 (MQ=255)                              cGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATAGGGCGAGAAGAGAGGAGTGTCAGGTAGTTGTCAGGATTATGTTGCGCCTGCga                                                                                         >  2:1459715/1‑139 (MQ=255)                               gTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgac                                                                                        >  1:89389/1‑139 (MQ=255)                                tCCAGATTGATCTCTAAATCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgacc                                                                                       >  2:851454/1‑139 (MQ=255)                                tCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgacc                                                                                       >  2:855366/1‑139 (MQ=255)                                tCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgacc                                                                                       >  2:636812/1‑139 (MQ=255)                                tCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgacc                                                                                       >  1:59369/1‑139 (MQ=255)                                tCCAGATTGATCTCTAAAGAATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgac                                                                                        >  1:1117907/1‑138 (MQ=255)                                tCCAGATTGATCTCTAAAGAATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgac                                                                                        <  2:1117907/138‑1 (MQ=255)                                 ccAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgacca                                                                                      <  2:471517/139‑1 (MQ=255)                                    gATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCgaccagac                                                                                   >  1:1294049/1‑139 (MQ=255)                                          tctcTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAggcg                                                                             >  2:766972/1‑139 (MQ=255)                                          tctcTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAggcg                                                                             >  1:120076/1‑139 (MQ=255)                                           ctctAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAggcgg                                                                            >  2:103377/1‑139 (MQ=255)                                              tAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAgg                                                                                                           >  2:1100104/1‑105 (MQ=255)                                              tAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAgg                                                                                                           <  1:1100104/105‑1 (MQ=255)                                               aaaGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGa                                                                        >  2:21173/1‑139 (MQ=255)                                                aaGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGaa                                                                       <  1:855366/139‑1 (MQ=255)                                                 aGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      <  1:530870/139‑1 (MQ=255)                                                   cATGAATCACCAAAGTGCTCAGCACACAGCAGCCGGGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  2:1352904/139‑1 (MQ=255)                                                   cATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  1:103377/139‑1 (MQ=255)                                                   cATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  2:120076/139‑1 (MQ=255)                                                   cATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  1:851454/139‑1 (MQ=255)                                                   cATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  1:78859/139‑1 (MQ=255)                                                   cATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  2:59369/139‑1 (MQ=255)                                                   cATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGCAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    >  2:1394515/1‑139 (MQ=255)                                                     tGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      >  1:120354/1‑135 (MQ=255)                                                     tGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      <  2:120354/135‑1 (MQ=255)                                                      gAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGaccagaccag                                                                                <  1:457501/124‑1 (MQ=255)                                                      gAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGaccagaccag                                                                                >  2:457501/1‑124 (MQ=255)                                                      gAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      <  2:1163289/134‑1 (MQ=255)                                                      gAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      >  1:1163289/1‑134 (MQ=255)                                                          cACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGtata                                                             <  2:409515/139‑1 (MQ=255)                                                            ccAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGtatata                                                           >  1:1366761/1‑139 (MQ=255)                                                                  tGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGtt                                                     >  1:724893/1‑139 (MQ=255)                                                                       accacACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGaa                                                                       <  1:427345/116‑1 (MQ=255)                                                                       accacACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGaa                                                                       >  2:427345/1‑116 (MQ=255)                                                                          acacaGGAGGCGGGCACCGGTTTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCGGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACtcg                                             <  2:771835/139‑3 (MQ=255)                                                                          acacaGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTgg                                             <  1:766972/139‑1 (MQ=255)                                                                            acaGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTa                                                                                                                    >  1:520461/1‑66 (MQ=255)                                                                            acaGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTa                                                                                                                    <  2:520461/66‑1 (MQ=255)                                                                                     gAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGcc                                  <  1:1453596/139‑1 (MQ=255)                                                                                       gCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAg                                <  2:1366761/139‑1 (MQ=255)                                                                                         aCCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGAt                              <  1:1394515/139‑1 (MQ=255)                                                                                             cATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  1:734807/97‑1 (MQ=255)                                                                                             cATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    >  2:734807/1‑97 (MQ=255)                                                                                                     gCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTg                                                                 >  1:205632/1‑92 (MQ=255)                                                                                                     gCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTg                                                                 <  2:205632/92‑1 (MQ=255)                                                                                                     gCATTATTCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGc                  >  2:1261865/1‑139 (MQ=255)                                                                                                       attattCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAg                >  2:1050782/1‑139 (MQ=255)                                                                                                            tCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTgg                                             <  2:1292430/105‑1 (MQ=255)                                                                                                            tCGGGATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTgg                                             >  1:1292430/1‑105 (MQ=255)                                                                                                               ggATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCa                         >  1:725771/1‑122 (MQ=255)                                                                                                               ggATATGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCa                         <  2:725771/122‑1 (MQ=255)                                                                                                                  tatGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAGGCAATCCATaa     <  1:358010/139‑1 (MQ=255)                                                                                                                  tatGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAGGCAATCCATaa     <  1:1261865/139‑1 (MQ=255)                                                                                                                  tatGGCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAGGCAATCCATaa     <  1:21173/139‑1 (MQ=255)                                                                                                                  agagacaggaagaGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAGGCAATCCATaa     <  1:1523563/131‑1 (MQ=255)                                                                                                                     ggCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      >  2:1037372/1‑71 (MQ=255)                                                                                                                     ggCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      <  1:1037372/71‑1 (MQ=255)                                                                                                                     ggCGAGAAGAGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAGGCAATCCATAACGc  >  2:598078/1‑139 (MQ=255)                                                                                                                           aagaGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    >  1:831169/1‑67 (MQ=255)                                                                                                                           aagaGAGGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  2:831169/67‑1 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCt                                                                                             >  1:1233255/1‑37 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCt                                                                                             <  2:1233255/37‑1 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      >  2:522981/1‑60 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAg                                                                      <  1:522981/60‑1 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGctct                                                                  >  2:476439/1‑64 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGctct                                                                  <  1:476439/64‑1 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGtatata                                                           <  1:1251379/71‑1 (MQ=255)                                                                                                                                agGCGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGtatata                                                           >  2:1251379/1‑71 (MQ=255)                                                                                                                                   cGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    <  1:933733/59‑1 (MQ=255)                                                                                                                                   cGTGTCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGct                                                                    >  2:933733/1‑59 (MQ=255)                                                                                                                                       |                                                                                                                         AAAGATGCCATTGGCATAAATAATAAGAGCGTCCAGATTGATCTCTAAAGCATGAATCACCAAAGTGCTCACCACACAGCAGCCGAGCACCGCATTGAGGGCATTATTCGGGATATGGCGAGAAGAGAGGCGTGCCAGGTAGTGGTCAGGATTATGTTGCGCCTGCGACCAGACCAGGCGGGCGAAGCTCTGTATATAAATGTTGAGACTGGCAAAGCAGGCCAGATAGCCAATCACGCAGGCAATCCATAACGC  >  NC_000913/4369360‑4369614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑