Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	41,168	A→C	V255G (GTA→GGA)	caiT ←	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	41,168	0	A	C	100.0%	263.3 / NA	73	V255G (GTA→GGA)	caiT	putative transporter
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (36/37);  total (36/37)

CATGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGC  >  NC_000913/41032‑41301                                                                                                                                         |                                                                                                                                      caTGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTccc                                                                                                                                     >  1:1329452/1‑139 (MQ=255) caTGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTccc                                                                                                                                     >  2:909194/1‑139 (MQ=255)    gcgcGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCt                                                                                                                                  >  2:77651/1‑139 (MQ=255)      gcgGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCttt                                                                                                                                >  1:992528/1‑139 (MQ=255)                    aGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCGAg                                                                                                                  >  2:1256686/1‑139 (MQ=255)                          aTCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGc                                                                                                            >  1:317656/1‑139 (MQ=255)                           tCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCa                                                                                                           >  1:1016635/1‑139 (MQ=255)                           tCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCa                                                                                                           >  1:849724/1‑139 (MQ=255)                           tCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCa                                                                                                           >  2:1389565/1‑139 (MQ=255)                             cccACCGAATCGGTGAAGTATTTCATTATTAAGCTGGCATCGCTGACAATTAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTGGTTGCAGACCGCAAGCGACGCaaa                                                                                                         <  2:782767/139‑1 (MQ=255)                                aCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATgg                                                                                                      >  1:907038/1‑139 (MQ=255)                                aCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATgg                                                                                                      >  2:870461/1‑139 (MQ=255)                                    attCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCACAAGCGACGCAAATGGCGtt                                                                                                  <  2:903091/137‑1 (MQ=255)                                      tCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGa                                                                                                >  1:234095/1‑139 (MQ=255)                                          tGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGAt                                                                                            <  1:286948/139‑1 (MQ=255)                                                 gtTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcag                                                                                     <  2:849724/139‑1 (MQ=255)                                                 gtTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCca                                                                                      >  2:1424032/1‑138 (MQ=255)                                                 gtTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCca                                                                                      <  1:1424032/138‑1 (MQ=255)                                                  ttCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagc                                                                                    >  2:1374240/1‑139 (MQ=255)                                                  ttCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagc                                                                                    <  2:1328664/139‑1 (MQ=255)                                                    cATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagcag                                                                                  <  2:1016635/139‑1 (MQ=255)                                                      tgatgaAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCTTTGAGGATAATCCAGCAGGt                                                                                >  1:1048121/1‑139 (MQ=255)                                                      tgatgaAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGt                                                                                <  2:907038/139‑1 (MQ=255)                                                         tgaAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGtt                                                                                                  <  1:351884/118‑1 (MQ=255)                                                         tgaAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGtt                                                                                                  >  2:351884/1‑118 (MQ=255)                                                                ggCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGa                                                                                                               >  2:1273604/1‑98 (MQ=255)                                                                ggCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGa                                                                                                               <  1:1273604/98‑1 (MQ=255)                                                                 gCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCa                                                                                                                    >  1:31313/1‑92 (MQ=255)                                                                 gCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCa                                                                                                                    <  2:31313/92‑1 (MQ=255)                                                                  cACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGAt                                                                                            <  1:1274889/115‑1 (MQ=255)                                                                  cACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGAt                                                                                            >  2:1274889/1‑115 (MQ=255)                                                                   aCCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCg                                                                   >  2:359025/1‑139 (MQ=255)                                                                   aCCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTCTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCg                                                                   <  1:870461/139‑1 (MQ=255)                                                                     cGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCGAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc                                                                 <  1:1256686/139‑1 (MQ=255)                                                                     cGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc                                                                 <  1:1389565/139‑1 (MQ=255)                                                                     cGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc                                                                 <  2:234095/139‑1 (MQ=255)                                                                     cGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc                                                                 <  1:77651/139‑1 (MQ=255)                                                                     cGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc                                                                 <  1:1374240/139‑1 (MQ=255)                                                                            aaTGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc                                                                 <  2:1164232/132‑1 (MQ=255)                                                                            aaTGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc                                                                 >  1:1164232/1‑132 (MQ=255)                                                                                  cacCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGtt                                                                                                  <  2:322791/93‑1 (MQ=255)                                                                                  cacCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGtt                                                                                                  >  1:322791/1‑93 (MQ=255)                                                                                               aTCAGGAAGCTCAGGTAACTACGCACTTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGa                                                                                                               <  1:934336/67‑1 (MQ=255)                                                                                               aTCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGa                                                                                                               >  2:934336/1‑67 (MQ=255)                                                                                               aTCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAAtgatga                                                                        >  2:694559/1‑106 (MQ=255)                                                                                               aTCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAAtgatga                                                                        <  1:694559/106‑1 (MQ=255)                                                                                               aTCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCaa                                       >  1:209669/1‑139 (MQ=255)                                                                                                   ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCTTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaacaa                                   <  2:1048121/139‑1 (MQ=255)                                                                                                   ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaacaa                                   <  1:359025/139‑1 (MQ=255)                                                                                                   ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaacaa                                   >  2:1199484/1‑139 (MQ=255)                                                                                                   ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaacaa                                   <  2:1329452/139‑1 (MQ=255)                                                                                                   ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaac                                     >  1:1492535/1‑137 (MQ=255)                                                                                                   ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaac                                     <  2:1492535/137‑1 (MQ=255)                                                                                                     aaGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAAcc                                 <  1:1016378/139‑1 (MQ=255)                                                                                                       gCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCAt                               <  2:317656/139‑1 (MQ=255)                                                                                                        cTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCaa                                                                                                                   <  1:1151075/54‑1 (MQ=255)                                                                                                        cTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCaa                                                                                                                   >  2:1151075/1‑54 (MQ=255)                                                                                                           aGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCa                           >  2:1029885/1‑139 (MQ=255)                                                                                                                     gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGAc                                                                                                              >  2:335631/1‑46 (MQ=255)                                                                                                                     gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGAc                                                                                                              <  1:335631/46‑1 (MQ=255)                                                                                                                     gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGt                 >  2:627270/1‑139 (MQ=255)                                                                                                                      cACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGaa                                             <  1:1296976/110‑1 (MQ=255)                                                                                                                      cACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGaa                                             >  2:1296976/1‑110 (MQ=255)                                                                                                                       aCGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTg                                                           >  1:1280543/1‑95 (MQ=255)                                                                                                                       aCGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTg                                                           <  2:1280543/95‑1 (MQ=255)                                                                                                                         gTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCAcc             >  2:1168198/1‑139 (MQ=255)                                                                                                                              tGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAg                                                                     <  1:959262/78‑1 (MQ=255)                                                                                                                              tGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAg                                                                     >  2:959262/1‑78 (MQ=255)                                                                                                                                gCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaac                                     <  1:281912/108‑1 (MQ=255)                                                                                                                                gCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaac                                     >  2:281912/1‑108 (MQ=255)                                                                                                                                 cGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGc                                          <  1:420789/102‑1 (MQ=255)                                                                                                                                 cGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGc                                          >  2:420789/1‑102 (MQ=255)                                                                                                                                    tACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGc  <  2:992528/139‑1 (MQ=255)                                                                                                                                     aCGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAg                                                                                               >  1:22349/1‑45 (MQ=255)                                                                                                                                     aCGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAg                                                                                               <  2:22349/45‑1 (MQ=255)                                                                                                                                         |                                                                                                                                      CATGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGC  >  NC_000913/41032‑41301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑