Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,012,553 Δ1 bp intergenic (+160/+61) yqeA → / ← yqeB putative amino acid kinase/XdhC‑CoxI family protein with NAD(P)‑binding Rossman fold

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,012,5520G.100.0% 331.0 / NA 83intergenic (+159/+62)yqeA/yqeBputative amino acid kinase/XdhC‑CoxI family protein with NAD(P)‑binding Rossman fold
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (40/43);  total (40/43)

ACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTA  >  NC_000913/3012415‑3012684
                                                                                                                                         |                                                                                                                                    
aCCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAgc                                                                                                                                     <  1:1134331/139‑2 (MQ=255)
    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAAtt                                                                                                                                >  2:100402/1‑139 (MQ=255)
    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAAtt                                                                                                                                >  2:249654/1‑139 (MQ=255)
    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAAtt                                                                                                                                >  2:477635/1‑139 (MQ=255)
    tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAAttt                                                                                                                               >  2:1154376/1‑139 (MQ=255)
       ggCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTgg                                                                                                                             <  1:497391/139‑1 (MQ=255)
       ggCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTgg                                                                                                                             <  2:341911/139‑1 (MQ=255)
           aaaGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGtt                                                                                                                         <  1:42773/139‑1 (MQ=255)
                ttGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAATACATCGCAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   <  1:1154376/139‑1 (MQ=255)
                   tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcatca                                                                                                                 >  2:308744/1‑139 (MQ=255)
                     aagtaagtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGt                                                                                                               <  1:477635/139‑1 (MQ=255)
                        taagtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGtctc                                                                                                            >  2:1456019/1‑139 (MQ=255)
                           gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAgg                                                                                                         <  1:314715/139‑1 (MQ=255)
                               gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     <  1:369209/139‑1 (MQ=255)
                                 tttGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   <  2:1138491/123‑1 (MQ=255)
                                 tttGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   >  1:1138491/1‑123 (MQ=255)
                                 tttGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt                                                                                                   >  2:1553719/1‑139 (MQ=255)
                                             ggATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   >  2:1100620/1‑111 (MQ=255)
                                             ggATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   <  1:1100620/111‑1 (MQ=255)
                                             ggATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAt                                                                                       >  2:226221/1‑139 (MQ=255)
                                               aTGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATcc                                                                                     >  2:481309/1‑139 (MQ=255)
                                                 gcggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCgg                                                                                   <  1:485708/139‑1 (MQ=255)
                                                       cgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAttt                                                                             <  1:100402/139‑1 (MQ=255)
                                                                tATCCGTCCTACAATACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCTTATCGCATCAGCAATTTGGCGTTTCTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAg                                                                    <  2:987328/139‑1 (MQ=38)
                                                                     gTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     <  2:1275248/101‑1 (MQ=255)
                                                                     gTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     >  1:1275248/1‑101 (MQ=255)
                                                                        cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc                                                            <  1:249654/139‑1 (MQ=255)
                                                                           cAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   <  1:612979/81‑1 (MQ=255)
                                                                           cAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   >  2:612979/1‑81 (MQ=255)
                                                                           cAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGc                                                         <  2:791494/139‑1 (MQ=255)
                                                                                   cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc                                                            >  2:1434449/1‑128 (MQ=255)
                                                                                   cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc                                                            <  1:1434449/128‑1 (MQ=255)
                                                                                   cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt                                                 >  2:896684/1‑139 (MQ=255)
                                                                                   cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt                                                 >  1:487119/1‑139 (MQ=255)
                                                                                   cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt                                                 >  1:1549745/1‑139 (MQ=255)
                                                                                     cAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   <  1:327771/71‑1 (MQ=255)
                                                                                     cAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   >  2:327771/1‑71 (MQ=255)
                                                                                         ttCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGc                                                                                  <  1:638670/100‑1 (MQ=255)
                                                                                         ttCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGc                                                                                  >  2:638670/1‑100 (MQ=255)
                                                                                             aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     >  1:1335696/1‑77 (MQ=255)
                                                                                             aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     <  2:1335696/77‑1 (MQ=255)
                                                                                              tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa                                      <  1:226221/139‑1 (MQ=255)
                                                                                               aGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCAc                                     <  1:308744/139‑1 (MQ=255)
                                                                                                        tGCGCTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     >  1:1038788/1‑66 (MQ=18)
                                                                                                        tGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     <  2:1038788/66‑1 (MQ=255)
                                                                                                          cACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   <  1:159953/50‑1 (MQ=17)
                                                                                                          cACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   >  2:401032/1‑50 (MQ=17)
                                                                                                          cACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   <  1:401032/50‑1 (MQ=17)
                                                                                                          cACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGtcat                                                                                                                   >  2:159953/1‑50 (MQ=17)
                                                                                                          cACTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCa                          >  1:1376073/1‑139 (MQ=255)
                                                                                                           aCTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCa                          <  2:659020/138‑1 (MQ=255)
                                                                                                           aCTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCa                          >  1:659020/1‑138 (MQ=255)
                                                                                                            cTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc                        <  2:1376073/139‑1 (MQ=255)
                                                                                                            cTTGTAGGCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc                        <  2:1549745/139‑1 (MQ=255)
                                                                                                                  ggCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCAt                         >  2:229113/1‑132 (MQ=255)
                                                                                                                  ggCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCAt                         <  1:229113/132‑1 (MQ=255)
                                                                                                                  ggCCTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatc                  >  1:1248898/1‑139 (MQ=255)
                                                                                                                    ccTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     <  2:833972/54‑1 (MQ=255)
                                                                                                                    ccTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     >  1:833972/1‑54 (MQ=255)
                                                                                                                    ccTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGcc                                                                  <  2:291801/89‑1 (MQ=255)
                                                                                                                    ccTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGcc                                                                  >  1:291801/1‑89 (MQ=255)
                                                                                                                    ccTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGc                                                         >  1:62803/1‑98 (MQ=255)
                                                                                                                    ccTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGc                                                         <  2:62803/98‑1 (MQ=255)
                                                                                                                     cTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt               <  1:481309/139‑1 (MQ=255)
                                                                                                                     cTGATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt               <  1:1456019/139‑1 (MQ=255)
                                                                                                                       gATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGt                                              <  1:926652/106‑1 (MQ=255)
                                                                                                                       gATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGt                                              >  2:926652/1‑106 (MQ=255)
                                                                                                                       gATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGc                                   <  2:1490396/117‑1 (MQ=255)
                                                                                                                       gATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGc                                   >  1:1490396/1‑117 (MQ=255)
                                                                                                                       gATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc                        >  2:711408/1‑128 (MQ=255)
                                                                                                                       gATAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc                        <  1:711408/128‑1 (MQ=255)
                                                                                                                        aTAAGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAAc            <  1:1553719/139‑1 (MQ=255)
                                                                                                                          aaGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGt                                              <  2:364726/103‑1 (MQ=255)
                                                                                                                          aaGCGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGt                                              >  1:364726/1‑103 (MQ=255)
                                                                                                                             cGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     <  1:1223427/45‑1 (MQ=18)
                                                                                                                             cGTAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg                                                                                                     >  2:1223427/1‑45 (MQ=21)
                                                                                                                               tAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGc                                                                   >  2:711438/1‑77 (MQ=255)
                                                                                                                               tAGCGCATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGc                                                                   <  1:711438/77‑1 (MQ=255)
                                                                                                                                 gcgcATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGt   >  2:479376/1‑139 (MQ=255)
                                                                                                                                  cgcATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt                                                                                                   <  2:560208/42‑1 (MQ=25)
                                                                                                                                  cgcATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggt                                                                                                   >  1:560208/1‑42 (MQ=25)
                                                                                                                                  cgcATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt                                                              >  2:975762/1‑79 (MQ=255)
                                                                                                                                  cgcATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt                                                              <  1:975762/79‑1 (MQ=255)
                                                                                                                                  cgcATCAGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTa  >  2:443225/1‑139 (MQ=255)
                                                                                                                                         |                                                                                                                                    
ACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTA  >  NC_000913/3012415‑3012684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: