| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,600,609 | (C)5→7 | coding (132/471 nt) | bcp → | peroxiredoxin, thiol peroxidase, thioredoxin‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,600,604 | 1 | . | C | 100.0% | 152.3 / NA | 44 | T43P (ACC→CCC) | bcp | peroxiredoxin, thiol peroxidase, thioredoxin‑dependent |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (23/21); total (23/21) | |||||||||||
| * | NC_000913 | 2,600,604 | 2 | . | C | 100.0% | 154.1 / NA | 44 | T43P (ACC→CCC) | bcp | peroxiredoxin, thiol peroxidase, thioredoxin‑dependent |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (23/21); total (23/21) | |||||||||||
AGTTAAGTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑CCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGAAAAAGA > NC_000913/2600469‑2600731 || aGTTAAGTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑ccc > 2:175494/1‑139 (MQ=255) aGTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGTGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccg > 1:965694/1‑136 (MQ=255) aGTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccg > 1:108658/1‑136 (MQ=255) aGTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccg > 1:1329363/1‑136 (MQ=255) gTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg < 2:1329363/139‑5 (MQ=255) gTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg < 2:108658/139‑5 (MQ=255) tGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGGCGTAGAACAAGTTAATTTGACCGACTGCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccggctgt < 1:1065834/139‑9 (MQ=255) aaTCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTAc > 2:363639/1‑139 (MQ=255) cACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTa < 2:135660/139‑1 (MQ=255) tGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCt < 1:363639/139‑1 (MQ=255) atatCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg < 2:529618/114‑5 (MQ=255) atatCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg > 1:529618/1‑110 (MQ=255) cGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTAcgcg > 2:1368129/1‑139 (MQ=255) gCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGa < 1:58662/139‑1 (MQ=255) gCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGa < 1:175494/139‑1 (MQ=255) gCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGa < 1:1368129/139‑1 (MQ=255) ccGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTAcgcg < 2:780197/135‑1 (MQ=255) ccGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTAcgcg > 1:780197/1‑135 (MQ=255) gACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg < 2:427428/82‑5 (MQ=255) gACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg > 1:427428/1‑78 (MQ=255) cGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑c < 2:9367/72‑1 (MQ=255) cGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑c > 1:9367/1‑72 (MQ=255) agaACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTg > 1:802156/1‑139 (MQ=255) aCAAGTTAATTTGACCGACTTCCAGGGATAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGAtg < 2:965694/139‑1 (MQ=255) aaGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccc < 1:1413412/67‑1 (MQ=255) aaGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccc > 2:1413412/1‑67 (MQ=255) aGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGc > 1:1558957/1‑139 (MQ=255) gTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCt > 1:1237594/1‑139 (MQ=255) aaTTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTggg > 1:224467/1‑139 (MQ=255) aaTTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg < 1:1404579/67‑5 (MQ=255) aaTTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑cccccccgg > 2:1404579/1‑63 (MQ=255) aCTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCt < 1:1389885/80‑1 (MQ=255) aCTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCt > 2:1389885/1‑80 (MQ=255) cAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATaa < 2:224467/139‑1 (MQ=255) aGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCt > 1:446229/1‑68 (MQ=255) aGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCt < 2:446229/68‑1 (MQ=255) aGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑ccccc < 1:1382519/41‑1 (MQ=255) aGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑ccccc > 2:1382519/1‑41 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCg < 2:1198333/63‑1 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCg > 1:1198333/1‑63 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGGGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATaa < 2:220825/130‑1 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGGGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATaa > 1:220825/1‑130 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGc < 2:1113751/97‑1 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGc > 1:1113751/1‑97 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGAtgtg > 2:351312/1‑110 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGAtgtg < 1:351312/110‑1 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGaaaa > 2:981766/1‑139 (MQ=255) cGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGaaaa > 1:997823/1‑139 (MQ=255) gtgtTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGaaaaa < 1:981766/139‑1 (MQ=255) gTTTATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCg > 2:681411/1‑139 (MQ=255) tttATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTa < 2:1106298/43‑1 (MQ=255) tttATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTa > 1:1106298/1‑43 (MQ=255) tttATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTg < 2:606024/103‑1 (MQ=255) tttATTTCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTg > 1:606024/1‑103 (MQ=255) ttCTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGc < 2:802156/139‑1 (MQ=255) cTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAAc > 2:1463894/1‑115 (MQ=255) cTACCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAAc < 1:1463894/115‑1 (MQ=255) aCCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTg > 2:1262996/1‑94 (MQ=255) aCCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTg < 1:1262996/94‑1 (MQ=255) aCCCGAAAGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGaa > 2:58813/1‑139 (MQ=255) aaaGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGaa < 1:908952/134‑1 (MQ=255) aaaGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGaa > 2:908952/1‑134 (MQ=255) aaaGCCATGACCCCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGAAAAaga > 2:259064/1‑139 (MQ=255) || AGTTAAGTAATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGA‑‑CCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGAAAAAGA > NC_000913/2600469‑2600731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |