Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,090,138 +C coding (384/498 nt) yggI → Zn‑dependent metalloprotease‑related protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,090,1341.C100.0% 165.0 / NA 47F127S (TTC→TCC) yggIZn‑dependent metalloprotease‑related protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (23/24);  total (23/24)

ACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTT‑CCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAACCATCTG  >  NC_000913/3089997‑3090259
                                                                                                                                          |                                                                                                                             
acaTTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTT‑c                                                                                                                              >  1:1018291/1‑139 (MQ=255)
     tGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTT‑ccccct                                                                                                                         <  1:426912/139‑3 (MQ=255)
             tGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGCAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGcgtc                                                                                                                  <  1:967026/139‑4 (MQ=255)
              ggAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTg                                                                                                                   <  1:1185378/137‑1 (MQ=255)
              ggAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCa                                                                                                                 <  2:284315/139‑1 (MQ=255)
              ggAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACCCCTCAGTTCGAACTGCAATCCGTGCGTCGCCACACCTTCCCCCTACCGCTg                                                                                                                   >  2:1185378/1‑137 (MQ=255)
                    aTTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGcc                                                                                                           >  2:257382/1‑139 (MQ=255)
                    aTTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACACATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGcc                                                                                                           >  2:808291/1‑139 (MQ=255)
                     tttCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCa                                                                                                          >  1:818403/1‑139 (MQ=255)
                       tCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCa                                                                                                                 <  2:1456578/130‑1 (MQ=255)
                       tCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCa                                                                                                                 >  1:1456578/1‑130 (MQ=255)
                         ggCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAg                                                                                                      <  2:1139605/139‑1 (MQ=255)
                         ggCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAg                                                                                                      <  2:1018291/139‑1 (MQ=255)
                                      cacaTGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCATCACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCg                                                                                         <  1:931393/139‑1 (MQ=255)
                                        caTGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGACCTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATTAGCTTACCGTa                                                                                       <  1:257382/139‑1 (MQ=255)
                                         aTGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTAc                                                                                      <  1:524572/139‑1 (MQ=255)
                                                agagTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTC‑cccc                                                                                                                           <  1:230270/94‑1 (MQ=255)
                                                agagTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTC‑cccc                                                                                                                           >  2:230270/1‑94 (MQ=255)
                                                   gtggaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATc                                                                                                  >  1:1552476/1‑117 (MQ=255)
                                                   gtggaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATc                                                                                                  <  2:1552476/117‑1 (MQ=255)
                                                    tggaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAAt                                                                           >  2:1059599/1‑139 (MQ=255)
                                                      gaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATcg                                                                         >  2:929806/1‑139 (MQ=255)
                                                       aagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATcgc                                                                        >  1:741234/1‑139 (MQ=255)
                                                       aagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACACATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATcgc                                                                        <  1:808291/139‑1 (MQ=255)
                                                                 tgGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACATCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg                                                              >  1:886066/1‑139 (MQ=255)
                                                                 tgGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg                                                              >  1:149039/1‑139 (MQ=255)
                                                                       aCGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAgg                                                        <  2:741234/139‑1 (MQ=255)
                                                                           gCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGt                                                    >  1:1488484/1‑139 (MQ=255)
                                                                           gCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGt                                                    >  1:644836/1‑139 (MQ=255)
                                                                            cTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTc                                                   <  2:1488484/139‑1 (MQ=255)
                                                                               ggTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTAt                                                <  2:644836/139‑1 (MQ=255)
                                                                                 tgtTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTT‑cccc                                                                                                                           >  2:627458/1‑61 (MQ=255)
                                                                                 tgtTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTT‑cccc                                                                                                                           <  1:627458/61‑1 (MQ=255)
                                                                                   ttCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCt                                            >  1:1219290/1‑139 (MQ=255)
                                                                                            gtcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACt                                   <  1:1386670/139‑1 (MQ=255)
                                                                                            gtcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACt                                   <  2:149039/139‑1 (MQ=255)
                                                                                             tcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTAc                                                                                      >  1:1001323/1‑87 (MQ=255)
                                                                                             tcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTAc                                                                                      <  2:1001323/87‑1 (MQ=255)
                                                                                             tcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTg                                  >  1:701260/1‑139 (MQ=255)
                                                                                             tcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTg                                  >  1:551316/1‑139 (MQ=255)
                                                                                              cgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGcc                                                                                                           >  2:507153/1‑65 (MQ=255)
                                                                                              cgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGcc                                                                                                           <  1:507153/65‑1 (MQ=255)
                                                                                               gtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCg                                <  1:620747/139‑1 (MQ=255)
                                                                                                        aGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGc                       <  2:127556/139‑1 (MQ=255)
                                                                                                          ttCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTg                     >  1:1362170/1‑139 (MQ=255)
                                                                                                          ttCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTg                     >  2:896880/1‑139 (MQ=255)
                                                                                                               aCTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAgg                                                        <  2:1348453/99‑1 (MQ=255)
                                                                                                               aCTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAgg                                                        >  1:1348453/1‑99 (MQ=255)
                                                                                                               aCTGCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGc                >  2:827326/1‑139 (MQ=255)
                                                                                                                  gCAATCCGTGCGTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGaa             <  1:1297238/139‑1 (MQ=255)
                                                                                                                             gTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACt                                   >  2:427902/1‑106 (MQ=255)
                                                                                                                             gTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACt                                   <  1:427902/106‑1 (MQ=255)
                                                                                                                             gTCGCAACACCTTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAACCATCTg  <  2:1362170/139‑1 (MQ=255)
                                                                                                                                          |                                                                                                                             
ACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTT‑CCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAACCATCTG  >  NC_000913/3089997‑3090259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑