| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,475,562 | (G)6→7 | coding (126/1815 nt) | yjgL → | SopA‑central‑domain‑like hexapeptide repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,475,556 | 1 | . | G | 98.5% | 231.5 / ‑3.6 | 66 | coding (120/1815 nt) | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (31/34); total (32/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
TCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTC > NC_000913/4475423‑4475686 | tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg > 2:995084/1‑139 (MQ=255)tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg > 1:1356565/1‑139 (MQ=255)tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg > 2:517314/1‑139 (MQ=255)tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg < 2:1356565/139‑1 (MQ=255)tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg > 2:301026/1‑139 (MQ=255)tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑gg < 2:404734/136‑1 (MQ=255)tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑gg > 1:404734/1‑136 (MQ=255) aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 2:1217778/139‑2 (MQ=255) ttCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGAt < 1:301026/139‑1 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATaa > 1:1424052/1‑139 (MQ=255) gAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGACTGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAg > 2:401881/1‑139 (MQ=255) gAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg > 2:1605505/1‑124 (MQ=255) gAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 1:1605505/125‑2 (MQ=255) atatCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGa < 1:1612411/123‑1 (MQ=255) atatCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGa > 2:1612411/1‑123 (MQ=255) cAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATAttcctt > 2:593449/1‑139 (MQ=255) attattCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAg < 2:466214/139‑1 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCAtt > 2:887913/1‑139 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCAtt > 1:829254/1‑139 (MQ=255) attacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttt > 1:996989/1‑139 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑gggggggcagg < 2:804316/93‑6 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑gggggggcagg > 1:804316/1‑88 (MQ=255) acattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTg > 2:1069881/1‑139 (MQ=255) ttaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 2:829254/139‑1 (MQ=255) ttaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 2:929547/139‑1 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaa > 1:202951/1‑139 (MQ=255) aGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:996989/139‑1 (MQ=255) aGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:699882/139‑1 (MQ=255) aGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:202951/139‑1 (MQ=255) aGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 1:699882/1‑139 (MQ=255) aGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑gg > 2:911494/1‑78 (MQ=255) aGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑gg < 1:911494/78‑1 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAg > 2:276044/1‑139 (MQ=255) ccGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGa > 1:677017/1‑139 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATAtt < 2:1600952/139‑1 (MQ=255) ttttAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAc < 1:1069881/139‑1 (MQ=255) aaCAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTgg < 1:887913/139‑1 (MQ=255) aaaaGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAcc < 1:263903/130‑1 (MQ=255) aaaaGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAcc > 2:263903/1‑130 (MQ=255) aaTACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGaa < 2:52247/66‑1 (MQ=255) aaTACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGaa > 1:52247/1‑66 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGAt < 2:402444/50‑1 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGAt > 1:402444/1‑50 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATAttct > 2:622656/1‑67 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATAttct < 1:622656/67‑1 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa > 2:855493/1‑98 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 1:855493/98‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGAt > 1:688119/1‑48 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGAt < 2:688119/48‑1 (MQ=39) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAat > 1:812733/1‑60 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAat < 2:812733/60‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTAtg > 1:126571/1‑118 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTAtg < 2:126571/118‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCa > 2:719680/1‑139 (MQ=255) cGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAAc > 2:47411/1‑139 (MQ=255) ttGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCCTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAg < 1:593449/139‑1 (MQ=255) tGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATAttcttt < 1:245129/60‑1 (MQ=255) tGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATAttcttt > 2:245129/1‑60 (MQ=255) tGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAcc < 1:296116/101‑1 (MQ=255) tGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTAcc > 2:296116/1‑101 (MQ=255) tGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGc > 2:517442/1‑139 (MQ=255) atgaatgaTTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGt < 1:276044/139‑1 (MQ=255) tgaTTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGaaa > 1:1442616/1‑139 (MQ=255) tttGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatg < 2:1424052/139‑1 (MQ=255) ttGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatga < 2:1442616/139‑1 (MQ=255) cccGTATTGTCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCaaa > 1:300721/1‑108 (MQ=255) cccGTATTG‑TCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCaaa < 2:300721/108‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTa > 2:969109/1‑60 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTa < 1:969109/60‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCa > 1:804448/1‑106 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCa < 2:804448/106‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGc > 1:334816/1‑122 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGc < 2:334816/122‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg < 2:677017/139‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg > 1:23062/1‑139 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg < 1:47411/139‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg < 1:719680/139‑1 (MQ=255) cGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCaaa > 1:1522830/1‑106 (MQ=255) cGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCaaa < 2:1522830/106‑1 (MQ=255) gTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTc < 1:995084/139‑1 (MQ=255) | TCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTC > NC_000913/4475423‑4475686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |