Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,456,797	G→C	A141P (GCC→CCC)	gspD →	general secretory pathway component, cryptic

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,456,797	0	G	C	100.0%	253.6 / NA	71	A141P (GCC→CCC)	gspD	general secretory pathway component, cryptic
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (33/38);  total (33/38)

TTTTCTGAAAGTGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑GCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTT  >  NC_000913/3456664‑3456928                                                                                                                                       |                                                                                                                                    ttttCTGAAAGTGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGAGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑cccccc                                                                                                                                <  1:609083/139‑1 (MQ=255)   ttCTGAAAGTGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTGCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCt                                                                                                                              >  1:1098781/1‑139 (MQ=255)          aGTGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGc                                                                                                                       <  1:368109/139‑1 (MQ=255)            tGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCa                                                                                                                     <  2:15130/139‑1 (MQ=255)             ggTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAg                                                                                                                    <  2:767946/139‑1 (MQ=255)                tCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGCTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTGCCCCCCCCTGCTCCGCCAgat                                                                                                                  >  1:20504/1‑139 (MQ=255)                       gCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATgatggatg                                                                                                          <  2:647388/139‑1 (MQ=255)                          aaTGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCgg                                                                                                       <  2:1422620/139‑1 (MQ=255)                          aaTGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCgg                                                                                                       <  2:1419374/139‑1 (MQ=255)                            tGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTTCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGTCCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGt                                                                                                     <  2:1079978/139‑1 (MQ=255)                                  aaCATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTc                                                                                               >  2:1017612/1‑139 (MQ=255)                                     aTCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  >  1:874963/1‑133 (MQ=255)                                     aTCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  <  2:874963/133‑1 (MQ=255)                                       cGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAgatg                                                                                                                 >  1:845853/1‑116 (MQ=255)                                       cGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAgatg                                                                                                                 <  2:845853/116‑1 (MQ=255)                                       cGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTaa                                                                                          >  1:274111/1‑139 (MQ=255)                                        gCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAAt                                                                                         >  1:666104/1‑139 (MQ=255)                                           aGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAAtgtt                                                                                      <  2:315811/139‑1 (MQ=255)                                             ggATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAAtgttgt                                                                                    <  2:1098781/139‑1 (MQ=255)                                                 gatTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCAt                                                                                <  2:580124/139‑1 (MQ=255)                                                  atTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCgg                                                                                                       <  1:1318824/115‑1 (MQ=255)                                                  atTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCgg                                                                                                       >  2:1318824/1‑115 (MQ=255)                                                            gTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTc                                                                     >  1:845844/1‑139 (MQ=255)                                                               ctcGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCaa                                                                  >  2:331881/1‑139 (MQ=255)                                                               ctcGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCaa                                                                  <  2:1437372/139‑1 (MQ=255)                                                               ctcGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCaa                                                                  <  2:666104/139‑1 (MQ=255)                                                                    ccAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTc                                                             <  2:845844/139‑1 (MQ=255)                                                                                  tgaGTTGGTCACCCGAATTGTACCTCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCt                                                                                                                           >  1:656313/1‑63 (MQ=255)                                                                                  tgaGTTGGTCACCCGAATTGTACCTCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCt                                                                                                                           <  2:656313/63‑1 (MQ=255)                                                                                  tgaGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  <  2:576917/88‑1 (MQ=255)                                                                                  tgaGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  >  1:576917/1‑88 (MQ=255)                                                                                  tgaGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGt                                               <  1:331881/139‑1 (MQ=255)                                                                                  tgaGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGt                                               >  2:1444256/1‑139 (MQ=255)                                                                                    aGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCg                                             <  2:274111/139‑1 (MQ=255)                                                                                      ttGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTTTTCTGACCGGTCGTg                                           >  2:1080514/1‑139 (MQ=255)                                                                                        ggTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGt                                               >  1:672329/1‑133 (MQ=255)                                                                                        ggTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGt                                               <  2:672329/133‑1 (MQ=255)                                                                                        ggTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGcc                                         >  1:1377762/1‑139 (MQ=255)                                                                                         gTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGTCCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGcgt                                        <  1:1017612/139‑3 (MQ=255)                                                                                         gTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCa                                                                                                                     <  2:775762/62‑1 (MQ=255)                                                                                         gTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCa                                                                                                                     >  1:775762/1‑62 (MQ=255)                                                                                         gTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATgatggat                                                                                                           >  2:1401506/1‑72 (MQ=255)                                                                                         gTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATgatggat                                                                                                           <  1:1401506/72‑1 (MQ=255)                                                                                         gTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGt                                               >  2:603544/1‑132 (MQ=255)                                                                                         gTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGt                                               <  1:603544/132‑1 (MQ=255)                                                                                           cACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCa                                                                                                                     >  2:1001898/1‑60 (MQ=255)                                                                                           cACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCa                                                                                                                     <  1:1001898/60‑1 (MQ=255)                                                                                           cACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTcc                                      >  2:448433/1‑139 (MQ=255)                                                                                              ccGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTGCCCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTccac                                    <  2:20504/139‑1 (MQ=255)                                                                                              ccGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTccacc                                   >  1:434844/1‑139 (MQ=255)                                                                                                gAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGtt                                                              <  1:858270/110‑1 (MQ=255)                                                                                                gAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATATTGTGCATTATGAACCCTCCAACGtt                                                              >  2:858270/1‑110 (MQ=255)                                                                                                        ccGCTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAAc                         >  2:938897/1‑139 (MQ=255)                                                                                                           cTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAgatga                                                                                                                <  1:576786/49‑1 (MQ=255)                                                                                                           cTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAgatga                                                                                                                >  2:576786/1‑49 (MQ=255)                                                                                                           cTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAAtgttgt                                                                                    <  2:1232789/77‑1 (MQ=255)                                                                                                           cTTGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAAtgttgt                                                                                    >  1:1232789/1‑77 (MQ=255)                                                                                                            ttGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTATTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGAt                     <  1:938897/139‑1 (MQ=255)                                                                                                            ttGAGAACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGAt                     <  1:637717/139‑1 (MQ=255)                                                                                                              gagaACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  <  2:4021/60‑1 (MQ=255)                                                                                                              gagaACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  >  1:4021/1‑60 (MQ=255)                                                                                                              gagaACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTg                   >  1:1315415/1‑139 (MQ=255)                                                                                                              gagaACGTTCCTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATGAAAAAACTGATTg                   <  1:1080514/139‑1 (MQ=255)                                                                                                                        cTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAAtgttgt                                                                                    >  2:1615597/1‑64 (MQ=255)                                                                                                                        cTGCTCGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAAtgttgt                                                                                    <  1:1615597/64‑1 (MQ=255)                                                                                                                             cGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  <  1:301227/45‑1 (MQ=255)                                                                                                                             cGTGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGc                                                                                                  >  2:301227/1‑45 (MQ=255)                                                                                                                               tGACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGtt  >  1:528812/1‑139 (MQ=255)                                                                                                                                gACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCaa                                                                  <  1:235214/74‑1 (MQ=255)                                                                                                                                gACCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCaa                                                                  >  2:235214/1‑74 (MQ=255)                                                                                                                                 aCCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTAtt                                                        >  1:858384/1‑83 (MQ=255)                                                                                                                                 aCCTG‑CCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTAtt                                                        <  2:858384/83‑1 (MQ=255)                                                                                                                                       |                                                                                                                                    TTTTCTGAAAGTGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTG‑GCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTT  >  NC_000913/3456664‑3456928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑