| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,895,071 | G→A | M140I (ATG→ATA) | chrR → | chromate reductase, Class I, flavoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,895,071 | 0 | G | A | 100.0% | 140.2 / NA | 44 | M140I (ATG→ATA) | chrR | chromate reductase, Class I, flavoprotein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (21/23); total (21/23) | |||||||||||
TCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATGGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGA > NC_000913/3894946‑3895206 | tCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCATTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGCGATGAACACGc < 1:932962/139‑1 (MQ=255) gATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATgg > 1:686989/1‑139 (MQ=255) aaCCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACATGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGggcgg > 1:1025648/1‑139 (MQ=255) aCCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGggcggc > 1:590560/1‑139 (MQ=255) ggCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGAtt < 2:686989/139‑1 (MQ=255) gCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTc > 2:1599394/1‑139 (MQ=255) tAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAAc > 1:549015/1‑139 (MQ=255) gATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCg < 2:549015/139‑1 (MQ=255) aTTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGc > 1:784289/1‑139 (MQ=255) ttCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCa < 2:590560/139‑1 (MQ=255) gACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAAcc > 2:1595575/1‑139 (MQ=255) aCCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCg < 1:1595575/139‑1 (MQ=255) cTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGaa > 1:518097/1‑139 (MQ=255) tCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAg < 1:1353133/139‑1 (MQ=255) tGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGtgat > 1:1514614/1‑139 (MQ=255) gggCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGtgatt < 1:141464/139‑1 (MQ=255) cGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGtgattgat < 1:1412050/139‑1 (MQ=255) gTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCg < 1:68721/124‑1 (MQ=255) gTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCg > 2:68721/1‑124 (MQ=255) tGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGgcggcg < 1:121331/93‑1 (MQ=255) tGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGgcggcg > 2:121331/1‑93 (MQ=255) aTTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAgg < 1:79675/139‑1 (MQ=255) cgcgcTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGtg > 2:1147618/1‑53 (MQ=255) cgcgcTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGtg < 1:1147618/53‑1 (MQ=255) cgcgcTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGa > 2:520830/1‑139 (MQ=255) cTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGaa > 1:201974/1‑74 (MQ=255) cTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGaa < 2:201974/74‑1 (MQ=255) cTGCGCCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAAt > 2:961751/1‑139 (MQ=255) gcgtcAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTg > 2:276356/5‑139 (MQ=255) gcgcCAGATTTTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCg > 2:1151242/1‑85 (MQ=255) gcgcCAGATTTTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCg < 1:1151242/85‑1 (MQ=255) gcgcCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGaa < 2:921920/72‑1 (MQ=255) gcgcCAGATTCTGGTTTACCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGaa > 1:921920/1‑72 (MQ=255) cgcCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGaa < 2:97669/71‑1 (MQ=255) cgcCAGATTCTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGaa > 1:97669/1‑71 (MQ=255) cTGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTg < 1:520830/139‑1 (MQ=255) tGGTTTTCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTgg < 2:784289/139‑1 (MQ=255) tCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGgag > 1:943921/1‑78 (MQ=255) tCCTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGgag < 2:943921/78‑1 (MQ=255) ccTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGtg > 2:89614/1‑82 (MQ=255) ccTCGATGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGtg < 1:89614/82‑1 (MQ=255) aTGCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCa < 2:919459/139‑1 (MQ=255) gCAATAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGc < 2:518097/139‑1 (MQ=255) aaTAGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGa < 2:1514614/139‑1 (MQ=255) | TCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATGGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGA > NC_000913/3894946‑3895206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |