Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 41,168 | A→C | V255G (GTA→GGA) | caiT ← | putative transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 41,168 | 0 | A | C | 100.0% | 272.3 / NA | 76 | V255G (GTA→GGA) | caiT | putative transporter |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (36/40); total (36/40) |
CATGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCA > NC_000913/41032‑41302 | caTGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTccc > 1:649049/1‑139 (MQ=255) aGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCa > 1:1099985/1‑139 (MQ=255) gCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGc < 1:711809/139‑1 (MQ=255) gCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGc < 2:1291386/139‑1 (MQ=255) cccACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCaaa < 2:397736/139‑1 (MQ=255) cccACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCaaa < 1:715579/139‑1 (MQ=255) ccACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGAc < 1:1380201/133‑1 (MQ=255) ccACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGAc > 2:1380201/1‑133 (MQ=255) cGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCg < 2:1509180/139‑1 (MQ=255) aaTCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCaa < 2:983110/131‑1 (MQ=255) aaTCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCaa > 1:983110/1‑131 (MQ=255) aaTCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGtt < 2:993483/139‑1 (MQ=255) aTCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTg > 2:1242017/1‑139 (MQ=255) tCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGa > 2:669748/1‑139 (MQ=255) tCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGa > 1:812878/1‑139 (MQ=255) agtTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCca < 2:649049/139‑1 (MQ=255) ttCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCa > 2:19344/1‑107 (MQ=255) ttCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCa < 1:19344/107‑1 (MQ=255) ttCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagc < 1:1242017/139‑1 (MQ=255) tgatgaAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGt > 1:1171203/1‑139 (MQ=255) gatgaAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTa > 2:628604/1‑139 (MQ=255) tgaAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAat > 1:1118897/1‑139 (MQ=255) aGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATg < 1:7710/110‑1 (MQ=255) aGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATg > 2:7710/1‑110 (MQ=255) aGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAatgat > 2:325498/1‑139 (MQ=255) gCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAg > 1:872567/1‑139 (MQ=255) cGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc < 2:872567/139‑1 (MQ=255) cGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc < 2:812878/139‑1 (MQ=255) cTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagcag < 2:711975/120‑1 (MQ=255) cTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagcag > 1:711975/1‑120 (MQ=255) cTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc < 2:89234/137‑1 (MQ=255) cTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTc > 1:89234/1‑137 (MQ=255) aaTGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGc < 1:1492863/139‑1 (MQ=255) aTGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCa < 1:669748/139‑1 (MQ=255) aTGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCa < 2:1099985/139‑1 (MQ=255) cacCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCTTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTa > 2:324016/1‑139 (MQ=255) cccaacccaGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATg > 1:895098/1‑139 (MQ=255) caacccaGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGtt < 1:1604638/89‑1 (MQ=255) caacccaGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGtt > 2:1604638/1‑89 (MQ=255) cATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCa < 1:628604/139‑1 (MQ=255) ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCg > 1:152632/1‑74 (MQ=255) ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCg < 2:152632/74‑1 (MQ=255) ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagcag < 2:738261/92‑1 (MQ=255) ggAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagcag > 1:738261/1‑92 (MQ=255) aaGCTCAGGTAACTACGCACGTCACTGGCGATACGGCCCCCTTTTTGTAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAAcc < 1:148146/139‑1 (MQ=255) cTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTg < 1:1324091/110‑1 (MQ=255) cTCAGGTAACTACGCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTg > 2:1324091/1‑110 (MQ=255) gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCg > 1:594955/1‑38 (MQ=255) gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCg < 2:594955/38‑1 (MQ=255) gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagc < 1:746220/72‑1 (MQ=255) gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagc > 2:746220/1‑72 (MQ=255) gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATg < 1:960715/113‑1 (MQ=255) gCACGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCAAGTTGCAGGGTATGCGGAATg > 2:960715/1‑113 (MQ=255) aCGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagc > 1:1331589/1‑70 (MQ=255) aCGTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagc < 2:1331589/70‑1 (MQ=255) gTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagcag < 1:1596781/70‑1 (MQ=255) gTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCcagcag > 2:1596781/1‑70 (MQ=255) gTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCa > 1:296403/1‑120 (MQ=255) gTCACTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCa < 2:296403/120‑1 (MQ=255) aCTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGa < 2:917729/56‑1 (MQ=255) aCTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGa > 1:917729/1‑56 (MQ=255) aCTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGt > 1:1388868/1‑69 (MQ=255) aCTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGt < 2:1388868/69‑1 (MQ=255) aCTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCa < 2:608941/92‑1 (MQ=255) aCTGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCa > 1:608941/1‑92 (MQ=255) tGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGAc > 2:645707/1‑37 (MQ=255) tGGCGATACGTCCCCCTTTTTGCAGACCGCAAGCGAc < 1:645707/37‑1 (MQ=255) gCGATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAgcggcg > 2:322555/1‑139 (MQ=255) gATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGt < 2:479079/63‑1 (MQ=255) gATACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGt > 1:479079/1‑63 (MQ=255) aTACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATg < 1:328370/39‑1 (MQ=255) aTACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATg > 2:328370/1‑39 (MQ=255) aTACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAAcc > 2:1531494/1‑109 (MQ=255) aTACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAAcc < 1:1531494/109‑1 (MQ=255) tACGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGc < 1:324016/139‑1 (MQ=255) aCGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCa < 2:895098/139‑1 (MQ=255) aCGTCCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCa > 2:1565051/1‑139 (MQ=255) | CATGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCA > NC_000913/41032‑41302 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |