Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,216,996 Δ2 bp [ymgC] [ymgC]

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,216,9950A.100.0% 375.2 / NA 87coding (248/249 nt)ymgCBlue light, low temperature and stress induced protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (44/43);  total (44/43)
*NC_0009131,216,9960G.100.0% 375.2 / NA 87coding (249/249 nt)ymgCBlue light, low temperature and stress induced protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (44/43);  total (44/43)

TTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTAGAACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTC  >  NC_000913/1216861‑1217123
                                                                                                                                      ||                                                                                                                                    
tttACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaactt                                                                                                                                   >  2:726908/1‑135 (MQ=255)
 ttACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTTTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaacttg                                                                                                                                  >  2:775824/1‑134 (MQ=255)
   aCGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCGGTACATTGTAATGCATAAGACTACACTAACGGATATCATTATTAATGTCAGGGAACCGGTGCTGTCTTaacttgag                                                                                                                                >  2:607495/1‑132 (MQ=255)
        tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaac                                                                                                                                     >  2:463817/1‑127 (MQ=255)
        tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaac                                                                                                                                     <  1:463817/129‑3 (MQ=255)
        tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAgg                                                                                                                         >  1:44165/1‑139 (MQ=255)
        tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAgg                                                                                                                         >  2:57469/1‑139 (MQ=255)
         gCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGt                                                                                                                        >  2:357902/1‑139 (MQ=255)
                  aGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATa                                                                                                          <  2:454178/139‑1 (MQ=255)
                      gAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACa                                                                                                      <  2:623001/139‑1 (MQ=255)
                        aaCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATc                                                                                                    <  2:338412/139‑1 (MQ=255)
                        aaCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATc                                                                                                    <  1:66626/139‑1 (MQ=255)
                          ccAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAg                                                                                                  <  2:44165/139‑1 (MQ=255)
                             gtgtGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTg                                                                                               <  1:726908/139‑1 (MQ=255)
                              tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGt                                                                                              >  2:868922/1‑139 (MQ=255)
                              tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGt                                                                                              >  1:1069238/1‑139 (MQ=255)
                                  aTTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCa                                                                                          <  1:95808/139‑1 (MQ=255)
                                   ttctttctGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCAc                                                                                         >  2:136418/1‑139 (MQ=255)
                                        tctGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaacttgag                                                                                                                                >  2:450112/1‑95 (MQ=255)
                                        tctGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaacttgag                                                                                                                                <  1:450112/102‑8 (MQ=255)
                                                   tCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTg                                                                                               >  2:202298/1‑117 (MQ=255)
                                                   tCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTg                                                                                               <  1:202298/117‑1 (MQ=255)
                                                           tatTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCAttt                                                                 >  1:946918/1‑139 (MQ=255)
                                                                   tACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCCT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCAttt                                                                 <  1:252149/131‑1 (MQ=255)
                                                                   tACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCCT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCAttt                                                                 >  2:252149/1‑131 (MQ=255)
                                                                      aTTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                      <  1:868922/139‑1 (MQ=255)
                                                                      aTTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                      <  1:357902/139‑1 (MQ=255)
                                                                      aTTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                      <  2:946918/139‑1 (MQ=255)
                                                                      aTTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                      <  1:136418/139‑1 (MQ=255)
                                                                        tGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGAt                                                                                <  1:379885/111‑1 (MQ=255)
                                                                        tGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGAt                                                                                >  2:379885/1‑111 (MQ=255)
                                                                        tGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCt                                                    >  2:455480/1‑139 (MQ=255)
                                                                             tGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCtt                                               >  2:955663/1‑139 (MQ=255)
                                                                               cATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATc                                                                                                    <  1:29911/84‑1 (MQ=255)
                                                                               cATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATc                                                                                                    >  2:29911/1‑84 (MQ=255)
                                                                               cATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCg                                                           <  2:15378/125‑1 (MQ=255)
                                                                               cATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCg                                                           >  1:15378/1‑125 (MQ=255)
                                                                                aTAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaa                                                                                                                                      >  1:346838/1‑55 (MQ=255)
                                                                                aTAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTaa                                                                                                                                      <  2:346838/56‑2 (MQ=255)
                                                                                  aaGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTtattat                                          <  2:363715/139‑1 (MQ=255)
                                                                                    gACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGt                                        >  1:1018190/1‑139 (MQ=255)
                                                                                      cTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTcc                                      <  1:455480/139‑1 (MQ=255)
                                                                                        acacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCaa                                                                            <  2:976866/99‑1 (MQ=255)
                                                                                        acacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCaa                                                                            >  1:976866/1‑99 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTaa                                                                                                                           >  1:594371/1‑56 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTaa                                                                                                                           <  2:594371/56‑1 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGtt                                                                                                                       >  2:119353/1‑60 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGtt                                                                                                                       <  1:119353/60‑1 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTAGACAGGAATAAACATCAGCTATATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGt                                        >  1:572456/1‑139 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                      <  2:621190/120‑1 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                      >  1:621190/1‑120 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCt                                                    >  2:845499/1‑122 (MQ=255)
                                                                                         cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCt                                                    <  1:845499/122‑1 (MQ=255)
                                                                                             aaCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAatat                               <  2:946196/139‑1 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATa                                                                                                          <  2:647629/63‑1 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATa                                                                                                          <  2:145078/63‑1 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATa                                                                                                          >  1:145078/1‑63 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATa                                                                                                          >  1:647629/1‑63 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAAc                                                                                                       <  2:756922/66‑1 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAAc                                                                                                       >  1:756922/1‑66 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATc                                                                                                    >  1:233665/1‑69 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATc                                                                                                    <  2:233665/69‑1 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAg                                                                      <  2:364964/99‑1 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAg                                                                      >  1:364964/1‑99 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATc                              >  1:847056/1‑139 (MQ=255)
                                                                                              aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATc                              >  1:280363/1‑139 (MQ=255)
                                                                                                   tatCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTg                                                                                               <  1:507150/69‑1 (MQ=255)
                                                                                                   tatCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTg                                                                                               >  2:507150/1‑69 (MQ=255)
                                                                                                   tatCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATg                                         >  1:867258/1‑123 (MQ=255)
                                                                                                   tatCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATg                                         <  2:867258/123‑1 (MQ=255)
                                                                                                    atCATTATTAATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGgtgt                        <  2:181202/139‑1 (MQ=255)
                                                                                                        ttattaATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGttt                                                                                                                      <  1:693574/46‑1 (MQ=255)
                                                                                                        ttattaATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGttt                                                                                                                      >  2:693574/1‑46 (MQ=255)
                                                                                                        ttattaATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAg                    >  2:1010163/1‑139 (MQ=255)
                                                                                                        ttattaATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAg                    >  1:212764/1‑139 (MQ=255)
                                                                                                           ttaATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGGGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAg                                                                                                  >  2:980599/1‑58 (MQ=255)
                                                                                                           ttaATGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAg                                                                                                  <  1:980599/58‑1 (MQ=255)
                                                                                                             aaTGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTc                                       <  2:171036/115‑1 (MQ=255)
                                                                                                             aaTGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTc                                       >  1:171036/1‑115 (MQ=255)
                                                                                                              aTGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGga              <  2:847056/139‑1 (MQ=255)
                                                                                                              aTGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGga              <  1:1010163/139‑1 (MQ=255)
                                                                                                              aTGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGga              >  1:807928/1‑139 (MQ=255)
                                                                                                               tGACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGgag             <  2:170998/139‑1 (MQ=255)
                                                                                                                gACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGtt                                                         >  1:15879/1‑94 (MQ=255)
                                                                                                                gACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGtt                                                         <  2:15879/94‑1 (MQ=255)
                                                                                                                gACAGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGgaga            >  2:214771/1‑139 (MQ=255)
                                                                                                                   aGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCa                                                                                                   <  2:507399/49‑1 (MQ=255)
                                                                                                                   aGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCa                                                                                                   >  1:507399/1‑49 (MQ=255)
                                                                                                                   aGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTtattat                                          >  1:33697/1‑106 (MQ=255)
                                                                                                                   aGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTtattat                                          <  2:33697/106‑1 (MQ=255)
                                                                                                                   aGGGAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGtt         >  1:1067383/1‑139 (MQ=255)
                                                                                                                    gggAATCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTtc        >  2:507576/1‑139 (MQ=255)
                                                                                                                        aTCCGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGc    <  1:955663/139‑1 (MQ=255)
                                                                                                                          ccGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGctc  >  1:618840/1‑139 (MQ=255)
                                                                                                                           cGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTa                                                        >  2:905210/1‑84 (MQ=255)
                                                                                                                           cGTGCTCTCTT‑‑AACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTa                                                        <  1:905210/84‑1 (MQ=255)
                                                                                                                                      ||                                                                                                                                    
TTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTAGAACTTGAGTAAGGTTTTA‑‑‑‑‑GAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTC  >  NC_000913/1216861‑1217123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: