| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 788831 = | 0 (0.000) | 34 (0.730) | 25/216 | 0.6 | 97.1% | coding (7/1041 nt) coding (1149/1149 nt) |
galM galK |
aldose 1‑epimerase, type‑1 mutarotase, galactose mutarotase galactokinase |
| ? | NC_000913 | 3742633 = | 2 (0.040) | intergenic (‑101/‑100) | yiaJ/yiaK | transcriptional repressor for the yiaKLMNO‑lyxK‑sgbHUE operon/2,3‑diketo‑L‑gulonate reductase, NADH‑dependent | |||||
CCATCGGAAAGCGGAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACA > NC_000913/788698‑788965 | ggctgcttttaactgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 2:7063‑M1/134‑139 (MQ=255)ccATCGGAAAGCGGAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtctta > 2:49620‑M1/1‑134 (MQ=255)ccATCGGAAAGCGGAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtctta < 2:142652‑M1/139‑6 (MQ=255) gcttttaactgctcaaatgtcactttcatcccaggcttcctggtttttttgatcgcttttttggcttaaaatttcaatatgcgcaacttgatttcaaatttatcgatcactttttaacaaggcaatctgTCAGCACTGt < 1:664616‑M1/10‑1 (MQ=255) aaTACGGGCGGAAAGTACAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGATAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgc > 2:616788‑M1/1‑120 (MQ=255) ctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 1:227804‑M1/119‑124 (MQ=255) ctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa < 2:227804‑M1/6‑1 (MQ=255) ctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGt < 1:1044076‑M1/10‑1 (MQ=255) ctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGt > 2:1044076‑M1/119‑128 (MQ=255) ctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTtg < 1:227489‑M1/21‑1 (MQ=255) tcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTtgt > 2:54288‑M1/118‑139 (MQ=255) aaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa > 1:361840‑M1/116‑139 (MQ=255) aagtCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctg > 2:482359‑M1/1‑103 (MQ=255) agtCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctga < 1:49620‑M1/139‑38 (MQ=255) ggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTaaaaa < 2:679354‑M1/43‑1 (MQ=255) ttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGtc > 1:319566‑M1/94‑139 (MQ=255) ccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgt > 2:120911‑M1/92‑92 (MQ=255) ccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgt < 1:120911‑M1/1‑1 (MQ=255) tttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTtgtg < 1:1074553‑M1/23‑1 (MQ=255) tttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTtgtg > 2:1074553‑M1/87‑109 (MQ=255) cAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctg > 1:646307‑M1/1‑84 (MQ=255) tgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa < 2:139797‑M1/6‑1 (MQ=255) tgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 1:139797‑M1/81‑86 (MQ=255) tGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatgg > 2:661874‑M1/1‑79 (MQ=255) tGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatgg < 1:661874‑M1/106‑28 (MQ=255) tcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGttt > 2:792776‑M1/78‑139 (MQ=255) aCTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtctta > 1:301726‑M1/1‑77 (MQ=255) aCTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtctta < 2:301726‑M1/82‑6 (MQ=255) cATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactg < 2:416564‑M1/112‑41 (MQ=255) cATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactg > 1:416564‑M1/1‑72 (MQ=255) cTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtc > 1:75426‑M1/1‑67 (MQ=255) cTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtc > 2:168874‑M1/1‑67 (MQ=255) cTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtc < 2:75426‑M1/139‑73 (MQ=255) tGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtca > 2:724525‑M1/1‑66 (MQ=255) gCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctct < 1:793878‑M1/119‑55 (MQ=255) gCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctct > 2:793878‑M1/1‑65 (MQ=255) ttgttACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggt < 2:80797‑M1/133‑72 (MQ=255) ttgttACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggt > 1:80797‑M1/1‑62 (MQ=255) tACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgc < 1:724525‑M1/139‑82 (MQ=255) cAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggt < 1:316510‑M1/125‑72 (MQ=255) cAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggt > 2:316510‑M1/1‑54 (MQ=255) aGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtct < 1:144260‑M1/129‑79 (MQ=255) aGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtct > 2:144260‑M1/1‑51 (MQ=255) aGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccag < 1:482359‑M1/139‑96 (MQ=255) gTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggt > 2:1066115‑M1/1‑39 (MQ=255) gTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggt < 1:1066115‑M1/125‑87 (MQ=255) gTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacg > 1:428651‑M1/1‑39 (MQ=255) gTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacg < 2:428651‑M1/89‑51 (MQ=255) aatatatcgatcactttttaacaaggcaatctgTCAGCa < 1:239243‑M1/6‑1 (MQ=255) aatatatcgatcactttttaacaaggcaatctgTCAGCa > 2:239243‑M1/34‑39 (MQ=255) tGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccag > 2:19358‑M1/1‑32 (MQ=255) tGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccag < 1:19358‑M1/127‑96 (MQ=255) aCCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgct > 1:1057667‑M1/1‑30 (MQ=255) aCCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgct < 2:1057667‑M1/112‑83 (MQ=255) cATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgc < 2:101632‑M1/120‑93 (MQ=255) cATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgc > 1:101632‑M1/1‑28 (MQ=255) cGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggt > 2:412730‑M1/1‑25 (MQ=255) cGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggt < 1:412730‑M1/101‑77 (MQ=255) atcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGt > 1:74684‑M1/25‑69 (MQ=255) atcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGt < 2:74684‑M1/45‑1 (MQ=255) atcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCt > 2:673721‑M1/25‑112 (MQ=255) atcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCt < 1:673721‑M1/88‑1 (MQ=255) tcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACa < 2:277714‑M1/85‑1 (MQ=255) tcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACa > 1:277714‑M1/24‑108 (MQ=255) taacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTGCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAgc > 1:972312‑M1/16‑139 (MQ=255) ggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATAc < 2:984280‑M1/56‑1 (MQ=255) ggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATAc > 1:984280‑M1/10‑65 (MQ=255) ggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATAc > 1:734533‑M1/10‑65 (MQ=255) ggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATAc < 2:734533‑M1/56‑1 (MQ=255) ggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGGTCAGCGcgacg < 1:14313‑M1/130‑1 (MQ=255) aGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataaccaaccataaatttacgtacggtgg < 2:358413‑M1/139‑131 (MQ=255) caatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAgcg > 1:985547‑M1/8‑132 (MQ=255) caatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAgcg < 2:985547‑M1/125‑1 (MQ=255) tcgtttcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataaccaaccataaatttacgtacggtggcgga > 1:425518‑M1/1‑5 (MQ=255) | CCATCGGAAAGCGGAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACA > NC_000913/788698‑788965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |