| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,490,116 | Δ11 bp | intergenic (‑53/+15) | yjgR ← / ← idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4490116 | 4490126 | 11 | 51 [0] | [0] 51 | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4490115 | 0 (0.000) | 51 (1.100) | 37/216 | 0.2 | 100% | intergenic (‑52/+26) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| ? | NC_000913 | 4490127 = | 0 (0.000) | intergenic (‑64/+14) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding | |||||
CCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCA > NC_000913/4489986‑4490246 | cccATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa > 2:81415‑M1/1‑130 (MQ=255)cccATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa > 1:366406‑M1/1‑130 (MQ=255) ccATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaa < 2:864259‑M1/139‑11 (MQ=255) aTGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaata > 1:101964‑M1/1‑127 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa > 1:715123‑M1/1‑120 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa < 2:715123‑M1/139‑20 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa > 1:1025578‑M1/1‑120 (MQ=255) ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa < 2:1025578‑M1/129‑10 (MQ=255) gCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtg < 2:804198‑M1/139‑33 (MQ=255) tAAAAACAGTTCTGTGTCCGACGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAAGCAACGTCCGGCAACGAGAgaagagaaaataacttaaagcgtgttgccgtgataa > 2:658114‑M1/1‑103 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacc > 1:140562‑M1/1‑93 (MQ=255) cTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc < 2:144234‑M1/139‑48 (MQ=255) tgtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgag > 2:555132‑M1/1‑89 (MQ=255) gCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaac < 1:15462‑M1/139‑57 (MQ=255) cGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaaca < 1:81415‑M1/139‑58 (MQ=255) gggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt < 1:555132‑M1/139‑63 (MQ=255) ggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttg < 2:140562‑M1/139‑64 (MQ=255) ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaagtcaacagtgttgtggttgtgatcgt > 2:683465‑M1/1‑63 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtta > 2:1031846‑M1/1‑61 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttg > 2:706015‑M1/1‑61 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttg < 1:706015‑M1/124‑64 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgt > 2:142922‑M1/1‑61 (MQ=255) atcACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgt < 1:142922‑M1/83‑24 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatt > 1:557696‑M1/1‑59 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag < 1:189556‑M1/117‑59 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag > 2:189556‑M1/1‑59 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgct < 2:557696‑M1/139‑93 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctc > 2:600284‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctc > 2:1074005‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat > 1:285772‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat < 2:285772‑M1/80‑35 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcag > 2:993796‑M1/1‑44 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcag > 2:591426‑M1/1‑44 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaac > 2:125351‑M1/1‑44 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaac < 1:125351‑M1/100‑57 (MQ=255) ccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaac < 2:290725‑M1/98‑57 (MQ=255) ccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaac > 1:290725‑M1/1‑42 (MQ=255) cctgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg > 2:171965‑M1/1‑35 (MQ=255) cctgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg < 1:171965‑M1/59‑25 (MQ=255) aGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat < 1:591426‑M1/139‑114 (MQ=255) taGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccga > 2:542193‑M1/1‑22 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgac < 1:993796‑M1/139‑119 (MQ=255) aaCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag > 2:609705‑M1/1‑17 (MQ=255) aaCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag < 1:609705‑M1/75‑59 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaata > 1:85077‑M1/1‑16 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatc > 2:711212‑M1/1‑14 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatc > 2:800810‑M1/1‑14 (MQ=255) ccGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaa > 1:588935‑M1/1‑12 (MQ=255) ggCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttggacggccatccgaccaatatcaaaa < 1:1074005‑M1/139‑130 (MQ=255) gCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaaac > 1:142248‑M1/1‑9 (MQ=255) cAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaaacg < 1:800810‑M1/139‑132 (MQ=255) | CCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCA > NC_000913/4489986‑4490246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |