| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,490,116 | Δ11 bp | intergenic (‑53/+15) | yjgR ← / ← idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4490116 | 4490126 | 11 | 79 [0] | [0] 79 | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4490115 | 0 (0.000) | 79 (1.450) | 49/206 | 0.1 | 100% | intergenic (‑52/+26) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| ? | NC_000913 | 4490127 = | 0 (0.000) | intergenic (‑64/+14) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding | |||||
ATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCA > NC_000913/4489989‑4490246 | aTGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaata > 1:493169‑M1/1‑127 (MQ=255) tCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttg > 1:1327093‑M1/1‑112 (MQ=255) cccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc < 2:198989‑M1/139‑29 (MQ=255) gTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGAGTTCACTCATGAGATATCCTCCAGTTTCCTGCTTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgata < 2:603970‑M1/139‑36 (MQ=255) aGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgat > 2:235932‑M1/1‑96 (MQ=255) ttCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAg > 1:292790‑M1/1‑94 (MQ=255) ttCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTGCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAg < 2:292790‑M1/95‑2 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacc > 2:355681‑M1/1‑93 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacc > 1:664674‑M1/1‑93 (MQ=255) cTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc < 2:664674‑M1/139‑48 (MQ=255) ggCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:355681‑M1/139‑56 (MQ=255) ggCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:235932‑M1/139‑56 (MQ=255) gTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag < 1:1075894‑M1/139‑59 (MQ=255) ggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttg < 2:1327093‑M1/139‑64 (MQ=255) ggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt < 1:956859‑M1/138‑63 (MQ=255) ggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt > 2:956859‑M1/1‑76 (MQ=255) ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgt > 2:182124‑M1/1‑63 (MQ=255) gTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtt < 1:182124‑M1/139‑78 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtta > 2:613527‑M1/1‑61 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa < 2:1120655‑M1/80‑20 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa > 1:1120655‑M1/1‑61 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaaga < 1:426413‑M1/64‑6 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaaga > 2:426413‑M1/1‑59 (MQ=255) atatCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttg > 1:146053‑M1/1‑49 (MQ=255) atatCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgag < 2:22472‑M1/99‑51 (MQ=255) atatCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgag > 1:22472‑M1/1‑49 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt < 2:492063‑M1/109‑63 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt > 1:492063‑M1/1‑47 (MQ=255) tcctccAGTTTGCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa < 2:222606‑M1/65‑20 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctc > 1:1126808‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaac > 2:1164603‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaac < 1:1164603‑M1/102‑57 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 2:664099‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:664099‑M1/101‑56 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa > 1:222606‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataact < 2:1227714‑M1/61‑16 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataact > 1:1227714‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagaga > 2:326383‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagaga < 1:326383‑M1/53‑8 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaaga < 1:65612‑M1/51‑6 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaaga > 2:65612‑M1/1‑46 (MQ=255) ctccAGTTTCCTGCGTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataa < 1:880185‑M1/57‑14 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc < 2:1300127‑M1/91‑48 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc > 1:1300127‑M1/1‑44 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataa < 1:474244‑M1/57‑14 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataa > 2:474244‑M1/1‑44 (MQ=255) ctccAGTATCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataa > 2:880185‑M1/1‑44 (MQ=255) tCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt > 2:992101‑M1/1‑36 (MQ=255) tCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt < 1:992101‑M1/98‑63 (MQ=255) cctgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaattaacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttg > 2:949520‑M1/1‑35 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttggg > 2:1064753‑M1/1‑33 (MQ=255) cctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg < 1:1064753‑M1/139‑109 (MQ=255) ggAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagtgtgttgccgtgataaatctgataccc > 1:1294694‑M1/1‑28 (MQ=255) ggAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagtgtgttgccgtgataaatctgataccc < 2:1294694‑M1/75‑48 (MQ=255) gTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatc < 1:613527‑M1/139‑115 (MQ=255) taGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgt < 2:144094‑M1/86‑65 (MQ=255) taGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgt > 1:144094‑M1/1‑22 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcg > 1:430537‑M1/1‑21 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcg < 2:430537‑M1/96‑76 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtg < 2:379939‑M1/81‑61 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtg > 1:379939‑M1/1‑21 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtga < 1:804065‑M1/54‑34 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtga > 2:804065‑M1/1‑21 (MQ=255) ggCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc < 1:949520‑M1/139‑120 (MQ=255) ggCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc > 2:321748‑M1/1‑20 (MQ=255) ggCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc < 1:321748‑M1/48‑29 (MQ=255) aaCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaat > 2:655317‑M1/1‑17 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc > 2:354554‑M1/1‑16 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc < 1:354554‑M1/135‑120 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatat > 1:254095‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttg < 2:908256‑M1/119‑105 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgc > 2:1102446‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgc < 1:1102446‑M1/106‑92 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt > 1:239228‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt < 2:239228‑M1/77‑63 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaacctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttg > 1:908256‑M1/1‑15 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag < 1:1343257‑M1/72‑59 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag > 2:1343257‑M1/1‑14 (MQ=255) cAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaaacg < 2:1126808‑M1/139‑132 (MQ=255) | ATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCA > NC_000913/4489989‑4490246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |