| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,619,478 | Δ9 bp | coding (1250‑1258/1323 nt) | deoA → | thymidine phosphorylase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4619478 | 4619486 | 9 | 52 [0] | [0] 52 | deoA | thymidine phosphorylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4619477 | 0 (0.000) | 52 (1.040) | 38/190 | 0.2 | 100% | coding (1249/1323 nt) | deoA | thymidine phosphorylase |
| ? | NC_000913 | 4619487 = | 0 (0.000) | coding (1259/1323 nt) | deoA | thymidine phosphorylase | |||||
GACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTG > NC_000913/4619351‑4619588 | gACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttg > 1:307208‑M1/1‑127 (MQ=255) tCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataa > 1:1076953‑M1/1‑120 (MQ=255) gATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaag < 2:307208‑M1/139‑22 (MQ=255) cGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaa > 1:652259‑M1/1‑110 (MQ=255) cGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagc > 2:1179516‑M1/1‑107 (MQ=255) gCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcac < 1:730123‑M1/139‑35 (MQ=255) ttACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacacc < 2:628937‑M1/139‑38 (MQ=255) tGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccgtaaagcacaccaact > 2:182646‑M1/1‑98 (MQ=255) atGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtct < 1:741722‑M1/139‑46 (MQ=255) atGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgc < 2:225535‑M1/107‑14 (MQ=255) atGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgc > 1:225535‑M1/1‑94 (MQ=255) ggCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctat < 2:361436‑M1/139‑48 (MQ=255) gcgcGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatc > 1:1116315‑M1/1‑91 (MQ=255) cgTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgcc > 2:1077823‑M1/1‑88 (MQ=255) cgTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgcc > 1:58624‑M1/1‑88 (MQ=255) gTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccg < 1:1077823‑M1/139‑53 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgt > 1:368623‑M1/1‑86 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaa > 2:188330‑M1/1‑86 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaa < 1:188330‑M1/125‑40 (MQ=255) gACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcg < 2:652259‑M1/139‑61 (MQ=255) ccAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcggcgaa < 1:925102‑M1/139‑63 (MQ=255) ccAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:32033‑M1/1‑77 (MQ=255) ccAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa < 2:58624‑M1/139‑63 (MQ=255) ggTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataa < 2:32033‑M1/139‑66 (MQ=255) ggTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataa < 1:1311986‑M1/139‑66 (MQ=255) gTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa < 2:1255461‑M1/135‑63 (MQ=255) gTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:1255461‑M1/1‑73 (MQ=255) tAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacg < 1:1179516‑M1/139‑68 (MQ=255) tAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacg < 2:134290‑M1/139‑68 (MQ=255) gACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggt < 2:349523‑M1/139‑70 (MQ=255) ggTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACTAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtata > 1:719349‑M1/1‑67 (MQ=255) tCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaata < 1:436820‑M1/129‑65 (MQ=255) tCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaata > 2:436820‑M1/1‑65 (MQ=255) aGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactga > 1:1203584‑M1/1‑63 (MQ=255) tCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa < 2:11905‑M1/121‑63 (MQ=255) tCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:11905‑M1/1‑59 (MQ=255) cGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgat < 2:1241378‑M1/139‑83 (MQ=255) cTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatca > 1:431573‑M1/1‑55 (MQ=255) cgcgAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagc < 2:1116315‑M1/139‑99 (MQ=255) cgAAAGACGAAAACCACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatctccgtatcagcgaataacggtatactgttctgatcatttaaattcgaagcac < 1:823454‑M1/139‑101 (MQ=255) gAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcact > 2:1192280‑M1/1‑38 (MQ=255) gAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaag < 1:710398‑M1/59‑22 (MQ=255) gAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaag > 2:710398‑M1/1‑38 (MQ=255) aGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgag < 2:1076953‑M1/139‑105 (MQ=255) aaaaCAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacg < 1:770636‑M1/97‑68 (MQ=255) aaaaCAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcac < 2:539771‑M1/64‑35 (MQ=255) aaaaCAACTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcac > 1:539771‑M1/1‑30 (MQ=255) aaaaCAACTGGCAGGAAACGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactatctatcgccgtatcagcgaataacg > 2:770636‑M1/1‑30 (MQ=255) aacaacTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggag < 2:368623‑M1/139‑112 (MQ=255) aacaacTGGCAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggag < 2:27239‑M1/139‑112 (MQ=255) cAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:718755‑M1/1‑19 (MQ=255) cAGGAAGCGGCGAAAGCGGcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa < 2:718755‑M1/81‑63 (MQ=255) | GACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTG > NC_000913/4619351‑4619588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |