Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,878,603 T→C D84G (GAT→GGT)  ygbF ← CRISPR adaptation ssRNA endonuclease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,878,6030TC100.0% 225.3 / NA 62D84G (GAT→GGT) ygbFCRISPR adaptation ssRNA endonuclease
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (32/30);  total (32/30)

AAAAGTATACATTTGTTCTTAAAGCATTTTTTCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCATCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCC  >  NC_000913/2878467‑2878722
                                                                                                                                        |                                                                                                                       
aaaaGTATACATTTGTTCTTAAAGCATTTTTTCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCAccc                                                                                                                       >  2:735588/1‑139 (MQ=255)
       taCATTTGTTCTTAAAGCATTTTTTCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTa                                                                                                                >  1:1223920/1‑139 (MQ=255)
       taCATTTGTTCTTAAAGCATTTTTTCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTa                                                                                                                >  1:291210/1‑139 (MQ=255)
        aCATTTGTTCTTAAAGCATTTTTTCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTAc                                                                                                               <  2:291210/139‑1 (MQ=255)
              gTTCTTAAAGCATTTTTTCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGt                                                                                                         >  1:910363/1‑139 (MQ=255)
                            ttttCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAAcc                                                                                           <  2:618516/139‑1 (MQ=255)
                                                 ccaACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          >  1:637926/1‑103 (MQ=255)
                                                 ccaACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          <  2:637926/103‑1 (MQ=255)
                                                           tGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          <  1:1271706/93‑1 (MQ=255)
                                                           tGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          >  2:1271706/1‑93 (MQ=255)
                                                               aCATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTc                                                        >  1:238958/1‑139 (MQ=255)
                                                                cATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCg                                                       >  2:967565/1‑139 (MQ=255)
                                                                cATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCg                                                       <  2:910363/139‑1 (MQ=255)
                                                                cATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCg                                                       >  2:583002/1‑139 (MQ=255)
                                                                   ttCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGc                                                                                                     >  2:117314/1‑90 (MQ=255)
                                                                   ttCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGc                                                                                                     <  1:117314/90‑1 (MQ=255)
                                                                     ccTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGcc                                                  <  1:611003/139‑1 (MQ=255)
                                                                       ttattattaAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCa                                                >  2:559448/1‑139 (MQ=255)
                                                                          ttattaAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTAc                                                                                                               >  2:559505/1‑73 (MQ=255)
                                                                          ttattaAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTAc                                                                                                               <  1:559505/73‑1 (MQ=255)
                                                                          ttattaAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGc                                             <  1:735588/139‑1 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTAc                                                                                                               >  2:466489/1‑62 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTAc                                                                                                               <  1:1214144/62‑1 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTAc                                                                                                               >  2:1214144/1‑62 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTAc                                                                                                               <  1:466489/62‑1 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAAccc                                                                                          <  2:763350/83‑1 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAAccc                                                                                          >  1:763350/1‑83 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCaa                                                                                        <  2:803725/85‑1 (MQ=255)
                                                                                     cAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCaa                                                                                        >  1:803725/1‑85 (MQ=255)
                                                                                      aGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATcc                                                                     <  1:1048496/103‑1 (MQ=255)
                                                                                      aGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATcc                                                                     >  2:1048496/1‑103 (MQ=255)
                                                                                      aGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCg                                                       <  2:1029231/117‑1 (MQ=255)
                                                                                      aGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCg                                                       >  1:1029231/1‑117 (MQ=255)
                                                                                       gCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGt                                                            >  2:633684/1‑111 (MQ=255)
                                                                                       gCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGt                                                            <  1:633684/111‑1 (MQ=255)
                                                                                       gCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCg                                                       >  1:945201/1‑116 (MQ=255)
                                                                                       gCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCg                                                       <  2:945201/116‑1 (MQ=255)
                                                                                           aTTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCctt                            >  1:132520/1‑139 (MQ=255)
                                                                                            ttCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGc                                             <  1:908984/121‑1 (MQ=255)
                                                                                            ttCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGc                                             >  2:908984/1‑121 (MQ=255)
                                                                                              cTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCcttctt                         >  1:303111/1‑139 (MQ=255)
                                                                                                ttGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTcc                       >  1:202067/1‑139 (MQ=255)
                                                                                                 tGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          <  2:993123/55‑1 (MQ=255)
                                                                                                 tGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          >  1:993123/1‑55 (MQ=255)
                                                                                                 tGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCg                      >  1:1103013/1‑139 (MQ=255)
                                                                                                  gTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          <  1:148678/54‑1 (MQ=255)
                                                                                                  gTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          >  2:148678/1‑54 (MQ=255)
                                                                                                      tCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGt                 <  2:132520/139‑1 (MQ=255)
                                                                                                      tCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGt                 <  2:1223920/139‑1 (MQ=255)
                                                                                                      tCAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGt                 <  1:583002/139‑1 (MQ=255)
                                                                                                       cAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          <  1:774752/49‑1 (MQ=255)
                                                                                                       cAAACAGGTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCgggg                                                                                                          >  2:774752/1‑49 (MQ=255)
                                                                                                              gTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTgg                                                                                >  2:603401/1‑68 (MQ=255)
                                                                                                              gTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTgg                                                                                <  1:603401/68‑1 (MQ=255)
                                                                                                              gTAAAAAAGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTAt         >  1:764364/1‑139 (MQ=255)
                                                                                                                  aaaaGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGt     <  2:238958/139‑1 (MQ=255)
                                                                                                                     aGACACCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTcc  <  2:303111/139‑1 (MQ=255)
                                                                                                                       acacCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCAt                                          <  2:1126363/97‑1 (MQ=255)
                                                                                                                       acacCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCAt                                          >  1:1126363/1‑97 (MQ=255)
                                                                                                                       acacCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACAt                                  <  2:458193/105‑1 (MQ=255)
                                                                                                                       acacCAACCTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACAt                                  >  1:458193/1‑105 (MQ=255)
                                                                                                                              ccTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCg                                                                   >  1:647175/1‑65 (MQ=255)
                                                                                                                              ccTTAAACCACCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCg                                                                   <  2:647175/65‑1 (MQ=255)
                                                                                                                                        |                                                                                                                       
AAAAGTATACATTTGTTCTTAAAGCATTTTTTCCCATAAAAACAACCCACCAACCTTAATGTAACATTTCCTTATTATTAAAGATCAGCTAATTCTTTGTTTTCAAACAGGTAAAAAAGACACCAACCTTAAACCATCCAAATCTACCGGGGTACGCCTGTTTAACCCAAATGTCTGGAACTCAAATCCCGTTTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCC  >  NC_000913/2878467‑2878722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑