| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,254,003 | C→T | intergenic (+115/+40) | ubiA → / ← plsB | p‑hydroxybenzoate octaprenyltransferase/glycerol‑3‑phosphate O‑acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,254,003 | 0 | C | T | 100.0% | 157.5 / NA | 49 | intergenic (+115/+40) | ubiA/plsB | p‑hydroxybenzoate octaprenyltransferase/glycerol‑3‑phosphate O‑acyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (27/22); total (27/22) | |||||||||||
TTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCA > NC_000913/4253882‑4254125 | tttCTGATGATGTAAAATAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTcg > 2:769517/1‑138 (MQ=255)tttCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTcg < 1:769517/138‑1 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCgg < 1:1088835/139‑1 (MQ=255) atgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAtt < 1:344812/139‑1 (MQ=255) atcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCGTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTAcc > 2:1221074/1‑139 (MQ=255) ttcttcTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCa < 1:1012925/105‑1 (MQ=255) ttcttcTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCa > 2:1012925/1‑105 (MQ=255) tcttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCg > 2:1243501/1‑139 (MQ=255) ggTTGCCTGATGCGCGGCGCTTCTCAGGCCTAC‑‑‑ACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACtctc > 1:648564/1‑139 (MQ=37) ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCaa > 1:663909/1‑100 (MQ=255) ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCaa < 2:663909/100‑1 (MQ=255) ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCaa < 2:575979/139‑1 (MQ=255) tACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATaa > 1:369970/1‑52 (MQ=255) tACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATaa < 2:369970/52‑1 (MQ=255) cacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCt < 2:1079661/90‑1 (MQ=255) cacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCt > 1:1079661/1‑90 (MQ=255) cacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCa > 1:358056/1‑139 (MQ=255) cacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCa > 1:1282148/1‑139 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCg < 1:387605/64‑1 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCg > 2:387605/1‑64 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCAct > 1:188325/1‑102 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCAct < 2:188325/102‑1 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCaa < 2:555712/107‑1 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCaa > 1:555712/1‑107 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGt > 2:979282/1‑122 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGt < 1:979282/122‑1 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTcc > 1:917491/1‑139 (MQ=255) cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTcc > 2:1329281/1‑139 (MQ=255) acaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCg < 2:759905/63‑1 (MQ=255) acaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCg > 1:759905/1‑63 (MQ=255) acaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCg < 1:1329281/139‑1 (MQ=255) aTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCa > 1:806830/1‑64 (MQ=255) aTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCa < 2:806830/64‑1 (MQ=255) aTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGcc > 1:815264/1‑139 (MQ=255) aTCGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGcc > 2:585958/1‑139 (MQ=255) cGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTc > 2:707287/1‑92 (MQ=255) cGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTc < 1:707287/92‑1 (MQ=255) cGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAg > 2:564846/1‑139 (MQ=255) cGCAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAg < 2:358056/139‑1 (MQ=255) cAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCa < 2:648564/139‑1 (MQ=255) aaTTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAt < 1:78669/71‑1 (MQ=255) aaTTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAt > 2:78669/1‑71 (MQ=255) tGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAtt < 1:445756/65‑1 (MQ=255) tGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAtt > 2:445756/1‑65 (MQ=255) ttGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCActct > 2:1063051/1‑84 (MQ=255) ttGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCActct < 1:1063051/84‑1 (MQ=255) tGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCt < 1:3360/64‑1 (MQ=255) tGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCt > 2:3360/1‑64 (MQ=255) gCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCa > 2:880592/1‑139 (MQ=255) | TTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCA > NC_000913/4253882‑4254125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |