| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,475,562 | (G)6→7 | coding (126/1815 nt) | yjgL → | SopA‑central‑domain‑like hexapeptide repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,475,556 | 1 | . | G | 96.0% | 254.7 / 2.5 | 74 | coding (120/1815 nt) | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base G (37/34); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
ACTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGG > NC_000913/4475421‑4475683 | aCTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggg > 1:649305/1‑139 (MQ=255) tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggg > 2:432963/1‑139 (MQ=255) aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggggg < 1:432963/139‑2 (MQ=255) aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggggg < 1:1230411/139‑2 (MQ=255) aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggggg > 1:199646/1‑138 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATaa > 2:185410/1‑139 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATaa > 2:1563887/1‑139 (MQ=255) cATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggg < 1:1004235/126‑1 (MQ=255) cATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGCGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggg > 2:1004235/1‑126 (MQ=255) gCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGa < 2:649305/139‑1 (MQ=255) atCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATAttct < 1:1563887/139‑1 (MQ=255) ttattCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGc < 2:538535/139‑1 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCAtt > 2:388576/1‑139 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCAtt > 1:1367921/1‑139 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑gggggggca > 1:54657/1‑100 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑gggggggca < 2:54657/103‑4 (MQ=255) aaCACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTag > 2:1423907/1‑139 (MQ=255) attacattcGCCAACAATTATAAACAAAAAAGTGAAGTCCTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGTAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttt < 1:459469/139‑1 (MQ=255) attacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttt > 1:523969/1‑139 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAg < 2:1520572/100‑1 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAg > 1:1520572/1‑100 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttttt > 1:1747366/1‑139 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttttt > 1:851879/1‑139 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggg > 1:1578846/1‑87 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggg < 2:1578846/87‑1 (MQ=255) attaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATaa > 1:1464594/1‑94 (MQ=255) attaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATaa < 2:1464594/94‑1 (MQ=255) ttaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 2:1367921/139‑1 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaa > 1:590592/1‑139 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAg < 1:1651505/93‑1 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAg > 2:1651505/1‑93 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAg > 2:1045888/1‑139 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAg > 2:1431230/1‑139 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑gg < 2:473619/77‑1 (MQ=255) gCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑gg > 1:473619/1‑77 (MQ=255) ccGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 1:815555/137‑1 (MQ=255) ccGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 2:815555/1‑137 (MQ=255) gACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 1:821303/135‑1 (MQ=255) gACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 2:821303/1‑135 (MQ=255) aCAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGTAAAGatat < 2:1747366/139‑1 (MQ=255) aCAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 2:590592/139‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGACG‑‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat > 2:1141523/1‑138 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAgg > 2:416495/1‑92 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAgg < 1:416495/92‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 1:1141523/138‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggggg > 2:472863/1‑76 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggggg < 1:472863/77‑2 (MQ=255) aaTTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggggg < 2:209787/76‑2 (MQ=255) aaTTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑ggggggg > 1:209787/1‑75 (MQ=255) aaaaGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTAt > 2:1005588/1‑139 (MQ=255) ttAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAatatc > 1:631373/1‑72 (MQ=255) ttAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATAtt < 2:631373/73‑1 (MQ=255) aaTACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGa < 1:587382/61‑1 (MQ=255) aaTACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGa > 2:587382/1‑61 (MQ=255) tACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACg < 1:185410/139‑1 (MQ=255) ccTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCt > 2:491795/1‑139 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAg < 1:271679/55‑1 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAg > 2:271679/1‑55 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTc > 1:1520097/1‑139 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGa > 2:1085032/1‑54 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGa < 1:1085032/54‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAg < 1:567634/56‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAg > 2:567634/1‑56 (MQ=255) gtTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat > 2:199577/1‑98 (MQ=255) gtTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 1:199577/98‑1 (MQ=255) gtTGGAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGaa < 1:388576/139‑1 (MQ=255) ggAATGAATGATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCg < 1:8560/139‑1 (MQ=255) aatgaatgATTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCggg < 2:851879/139‑1 (MQ=255) aatgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAg < 1:1016060/62‑1 (MQ=255) aatgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAg > 2:1016060/1‑62 (MQ=255) aatgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCaaa > 1:950148/1‑118 (MQ=255) aatgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCaaa < 2:950148/118‑1 (MQ=255) aatgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGa < 2:199646/139‑1 (MQ=255) aatgaTTTTGCCCGTATTG‑CC‑‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACg > 1:1453024/1‑119 (MQ=255) aatgaTTTTGCCCGTATTG‑CC‑‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTCTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACg < 2:1453024/119‑1 (MQ=255) atgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGaa > 2:1652506/1‑139 (MQ=255) atgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTC‑TTCTCCTGGAg < 2:1107771/60‑1 (MQ=255) atgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTC‑TTCTCCTGGAg > 1:1107771/1‑60 (MQ=255) tgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat > 2:1198887/1‑87 (MQ=255) tgaTTTTGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 1:1198887/87‑1 (MQ=255) tGCCCGTATTG‑CCGGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatga < 1:1399113/139‑1 (MQ=255) tGCCCGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatgat > 2:438625/1‑139 (MQ=255) cccGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCa < 2:998111/54‑1 (MQ=255) cccGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCa > 1:998111/1‑54 (MQ=255) cccGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 2:309398/72‑1 (MQ=255) cccGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa > 1:309398/1‑72 (MQ=255) cccGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGt < 2:894277/126‑1 (MQ=255) cccGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGt > 1:894277/1‑126 (MQ=255) cccGTATTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg > 1:633992/1‑139 (MQ=255) aTTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCt < 1:1525850/107‑1 (MQ=255) aTTG‑CCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCt > 2:1525850/1‑107 (MQ=255) | ACTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGG > NC_000913/4475421‑4475683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |