New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 128708425 (0.340)32 (0.540) 22/168 1.3 50.7% noncoding (153/171 nt) rttR rtT sRNA, processed from tyrT transcript
?NC_000913 1287557 = 42 (0.720)noncoding (66/85 nt) tyrT tRNA‑Tyr

CTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAA  >  NC_000913/1286954‑1287221
                                                                                                                                      |                                                                                                                                         
ctctctCGCTGGCGCTCGAGCCGAACCTTAATCGAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaacctt                                                                                                                                   >  2:1513242‑M1/1‑131 (MQ=255)
  ctctcGCTGGCGCTCGAGCCGAACCTTAATCGAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcg                                                                                                                                 <  2:1703996‑M1/139‑11 (MQ=255)
            cGCTCGAGCCGAACCTTAATCGAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCg                                                                                                                       <  2:659740/139‑1 (MQ=11)
             gCTCGAGCCGAACCTTAATCGAA‑‑‑GCTTCTCATCCTTCCCCGCATTGGCAGAATATTAGATTGCGGATTCGCTTGAGAATTCCTGGGCTTTTGAAAGTGATGGTGGTTGGGGAAGGATTACTCAGCGCTGCGCGCTTCGc                                                                                                                      >  1:899123/1‑139 (MQ=11)
                cGAGCCGAACCTTAATCGAAGCTGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgac                                                                                                                      <  2:1000995‑M1/139‑22 (MQ=255)
                       aaCCTTAATCGAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagattta                                                                                                            >  1:435573‑M1/1‑108 (MQ=255)
                          cTTAATCGAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGtt                                                                                                         <  2:197962/139‑1 (MQ=14)
                                 gAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctc                                                                                                  >  1:356167‑M1/1‑98 (MQ=255)
                                       gCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctg                                                                                                     >  2:1473668‑M1/1‑95 (MQ=255)
                                       gCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctg                                                                                                     <  1:1473668‑M1/133‑39 (MQ=255)
                                       gCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCa                                                                                               >  2:703134/1‑139 (MQ=11)
                                             cATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggcc                                                                                         <  2:356167‑M1/139‑51 (MQ=255)
                                                ccTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgct                                                                                      >  2:749150‑M1/1‑86 (MQ=255)
                                                    ccccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctg                                                                                                     >  2:351787‑M1/1‑82 (MQ=255)
                                                    ccccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctg                                                                                                     <  1:351787‑M1/120‑39 (MQ=255)
                                                          aTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaacccc                                                                            >  2:1807901‑M1/1‑76 (MQ=255)
                                                          aTGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCt                                                                            >  2:850017/1‑139 (MQ=11)
                                                          aTGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCt                                                                            >  1:440502/1‑139 (MQ=11)
                                                            gggCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccac                                                                          >  2:1269647‑M1/1‑74 (MQ=255)
                                                            gggCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccac                                                                          >  1:906943‑M1/1‑74 (MQ=255)
                                                             ggCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcggg                                                                                  <  2:439233‑M1/130‑58 (MQ=255)
                                                             ggCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcggg                                                                                  >  1:439233‑M1/1‑73 (MQ=255)
                                                              gCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaac                                                                               >  2:498478‑M1/1‑72 (MQ=255)
                                                              gCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaac                                                                               <  1:498478‑M1/132‑61 (MQ=255)
                                                                   atatTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggca                                                                                                                  >  2:75218‑M1/1‑67 (MQ=255)
                                                                   atatTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggca                                                                                                                  <  1:75218‑M1/92‑26 (MQ=255)
                                                                       ttaaTTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCg                                                                                                                       <  1:1304204/80‑1 (MQ=11)
                                                                       ttaaTTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCg                                                                                                                       >  2:1304204/4‑83 (MQ=11)
                                                                       ttGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaa                                                                                >  1:1106921‑M1/1‑63 (MQ=255)
                                                                       ttGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaa                                                                                <  2:1106921‑M1/122‑60 (MQ=255)
                                                                            tGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccaggggtaattcaaat                                                          >  1:110700‑M1/1‑58 (MQ=255)
                                                                            tGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccaggggtaattcaaat                                                          >  1:1148922‑M1/1‑58 (MQ=255)
                                                                             gCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccaggggtaattcaaatt                                                         <  2:1148922‑M1/139‑83 (MQ=255)
                                                                              cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTc                                                                                                                 >  2:1547549/1‑82 (MQ=11)
                                                                              cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTc                                                                                                                 <  1:1547549/82‑1 (MQ=11)
                                                                              cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCt                                                                            >  1:538515/1‑119 (MQ=14)
                                                                              cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCt                                                                            <  2:538515/119‑1 (MQ=14)
                                                                              cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGaa                                                        >  1:1703996/1‑139 (MQ=11)
                                                                              cGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccaggggtaattcaaattt                                                        >  1:695304‑M1/1‑56 (MQ=255)
                                                                              cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCttaatcga                                                         >  2:540940/1‑132 (MQ=11)
                                                                                 gattcgttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGc                                                      >  2:1751241/13‑139 (MQ=11)
                                                                                        tgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCAt                                               <  2:440502/134‑1 (MQ=11)
                                                                                              gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCa                                                >  2:1039944/1‑132 (MQ=255)
                                                                                              gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCa                                                <  1:1039944/132‑1 (MQ=255)
                                                                                              gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATcc                                             >  2:1420635/1‑135 (MQ=255)
                                                                                              gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATcc                                             <  1:1420635/135‑1 (MQ=255)
                                                                                               ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGgcgc                                                                             >  1:867404/1‑102 (MQ=40)
                                                                                               ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGgcgc                                                                             <  2:867404/102‑1 (MQ=40)
                                                                                               ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTccc                                        <  1:850017/139‑1 (MQ=12)
                                                                                                 cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggc                                                                                          >  2:1485945‑M1/1‑38 (MQ=255)
                                                                                                 cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggc                                                                                          <  1:1485945‑M1/87‑50 (MQ=255)
                                                                                                  aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcggg                                                                                  <  2:898203‑M1/94‑58 (MQ=255)
                                                                                                  aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcggg                                                                                  >  1:898203‑M1/1‑37 (MQ=255)
                                                                                                                  gATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggc                                                                                          <  1:290316‑M1/70‑50 (MQ=255)
                                                                                                                  gATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggc                                                                                          >  2:290316‑M1/1‑21 (MQ=255)
                                                                                                                    tggtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatca                   >  2:805693‑M1/1‑19 (MQ=255)
                                                                                                                      gtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcata                 >  1:717521‑M1/1‑17 (MQ=255)
                                                                                                                      gtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctcccttt                                                                                             >  2:1118927‑M1/1‑17 (MQ=255)
                                                                                                                      gtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctcccttt                                                                                             <  1:1118927‑M1/63‑47 (MQ=255)
                                                                                                                       tggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctc                                                                                     >  1:601665‑M1/1‑16 (MQ=255)
                                                                                                                       tggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctc                                                                                     <  2:601665‑M1/70‑55 (MQ=255)
                                                                                                                         gtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttgaccgctcgggaaccccaccacggggtaatgctttttactggc                                                  >  1:352961‑M1/1‑14 (MQ=255)
                                                                                                                         gtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttgaccgctcgggaaccccaccacggggtaatgctttttactggc                                                  <  2:352961‑M1/103‑90 (MQ=255)
                                                                                                                           gggggAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcgggg                          >  1:1470777‑M1/1‑12 (MQ=255)
                                                                                                                           gggggAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcgggg                          <  2:1470777‑M1/125‑114 (MQ=255)
                                                                                                                           aggggaAGGATTcgaaccttcgaagtcgatgacggcagattcacagtctgctccctttggccgctcgggaaccccactacggggtaatgctttttactggcctgctcccttatcgggaagccgggcgcatcatatcaaa            >  2:1129193‑M1/2‑12 (MQ=255)
                                                                                                                            ggggAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaat           >  1:1317704‑M1/1‑11 (MQ=255)
                                                                                                                             gggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAgcc                                                                      >  1:80801/1‑77 (MQ=14)
                                                                                                                             gggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAgcc                                                                      <  2:80801/79‑3 (MQ=17)
                                                                                                                                 aGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgc      >  2:116142‑M1/1‑6 (MQ=255)
                                                                                                                                  ggATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcg     <  1:805693‑M1/139‑135 (MQ=255)
                                                                                                                                   gATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgc    <  1:116142‑M1/139‑136 (MQ=255)
                                                                                                                                   gATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggta                                                                 >  2:1057534‑M1/1‑4 (MQ=255)
                                                                                                                                   gATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggta                                                                 <  1:1057534‑M1/78‑75 (MQ=255)
                                                                                                                                   gATTcgaaccttcgaagtcgatgacggcagattta                                                                                                            >  2:265250‑M1/1‑4 (MQ=255)
                                                                                                                                   gATTcgaaccttcgaagtcgatgacggcagattta                                                                                                            <  1:265250‑M1/35‑32 (MQ=255)
                                                                                                                                    aTTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgcc   >  1:1824832‑M1/1‑3 (MQ=255)
                                                                                                                                     ttcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccg  <  2:717521‑M1/139‑138 (MQ=255)
                                                                                                                                      |                                                                                                                                         
CTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAA‑‑‑GCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAA  >  NC_000913/1286954‑1287221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.