Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,006,491 C→T V180V (GTC→GTT
*370* (TAG→TAA
zapC →
ycbX ←
FtsZ stabilizer
6‑N‑hydroxylaminopurine detoxification oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,006,4910CT100.0% 196.3 / NA 61V180V (GTC→GTT
*370* (TAG→TAA
zapC
ycbX
FtsZ stabilizer
6‑N‑hydroxylaminopurine detoxification oxidoreductase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (33/28);  total (33/28)

CGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCC  >  NC_000913/1006356‑1006626
                                                                                                                                       |                                                                                                                                       
cGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTaa                                                                                                                                      <  2:1417318/138‑1 (MQ=255)
cGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTaa                                                                                                                                      >  1:1417318/1‑138 (MQ=255)
     tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGcc                                                                                                                                <  2:1616677/139‑1 (MQ=255)
       tGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGTCGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCaa                                                                                                                              >  1:854082/1‑139 (MQ=255)
             ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAg                                                                                                                        >  2:897152/1‑139 (MQ=255)
             ctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAg                                                                                                                        >  2:7030/1‑139 (MQ=255)
                 cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                    >  1:697988/1‑139 (MQ=255)
                 cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                    <  2:1728157/139‑1 (MQ=255)
                 cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                    <  1:945269/139‑1 (MQ=255)
                   caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGt                                                                                                                  <  2:697988/139‑1 (MQ=255)
                       ccTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACt                                                                                                                            >  1:1518245/1‑125 (MQ=255)
                       ccTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACt                                                                                                                            <  2:1518245/125‑1 (MQ=255)
                         tGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCgg                                                                                                            <  2:783088/139‑1 (MQ=255)
                          gCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAATGCAGTCTTCGGt                                                                                                           >  1:1269331/1‑139 (MQ=255)
                              tgttATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTacac                                                                                                       <  2:1169069/139‑1 (MQ=255)
                                ttATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTa                                                                                                          <  1:423134/134‑1 (MQ=255)
                                ttATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTa                                                                                                          >  2:423134/1‑134 (MQ=255)
                                ttATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg                                                                                                     >  1:1432542/1‑139 (MQ=255)
                                        ggTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTg                                                                                                                      <  2:1216749/114‑1 (MQ=255)
                                        ggTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTg                                                                                                                      >  1:1216749/1‑114 (MQ=255)
                                        ggTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa                                                                                             >  2:129136/1‑139 (MQ=255)
                                        ggTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa                                                                                             <  1:897152/139‑1 (MQ=255)
                                          tCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGcc                                                                                                                                <  2:1294132/102‑1 (MQ=255)
                                          tCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGcc                                                                                                                                >  1:1294132/1‑102 (MQ=255)
                                          tCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                    >  1:919014/1‑114 (MQ=255)
                                          tCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                    <  2:919014/114‑1 (MQ=255)
                                            gcgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGa                                                                                         <  1:127732/139‑1 (MQ=255)
                                             cgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                    >  1:672171/1‑111 (MQ=255)
                                             cgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                    <  2:672171/111‑1 (MQ=255)
                                              gcgATGCAGTTGGCGTCGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAAt                                                                                       <  2:854082/139‑1 (MQ=255)
                                                                gCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGCTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa                                                                      >  2:141565/1‑139 (MQ=255)
                                                                 ccATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCAt                                                                     >  2:1623311/1‑139 (MQ=255)
                                                                 ccATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCAt                                                                     >  2:1274891/1‑139 (MQ=255)
                                                                          tCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTg                                                                                                                      >  2:598518/1‑81 (MQ=255)
                                                                          tCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTg                                                                                                                      <  1:598518/81‑1 (MQ=255)
                                                                            aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTg                                                                                                                      <  2:85486/79‑1 (MQ=255)
                                                                            aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTg                                                                                                                      >  1:85486/1‑79 (MQ=255)
                                                                            aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAttttt                                                          >  1:916109/1‑139 (MQ=255)
                                                                             tGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTaa                                                                                                                                      <  2:654345/62‑1 (MQ=255)
                                                                             tGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTaa                                                                                                                                      >  1:654345/1‑62 (MQ=255)
                                                                              ggaCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTAGAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTc                                                        >  1:1098932/3‑139 (MQ=255)
                                                                              gAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTc                                                        >  2:437326/1‑139 (MQ=255)
                                                                              gAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTc                                                        >  1:737988/1‑139 (MQ=255)
                                                                               aaCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTaca                                                                                                        >  1:630402/1‑90 (MQ=255)
                                                                               aaCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTaca                                                                                                        <  2:630402/90‑1 (MQ=255)
                                                                                       gCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTg                                               >  2:422841/1‑139 (MQ=255)
                                                                                                 cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCtt                                     >  1:1017990/1‑139 (MQ=255)
                                                                                                             gACAGCTTCAGCCTCGAACAGGCAGTTTTACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGaa                         <  2:1098932/139‑1 (MQ=255)
                                                                                                             gACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGaa                         <  2:737988/139‑1 (MQ=255)
                                                                                                              aCAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATg                                                                                      >  2:988719/1‑77 (MQ=255)
                                                                                                              aCAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATg                                                                                      <  1:988719/77‑1 (MQ=255)
                                                                                                              aCAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGagc                        >  1:307578/1‑137 (MQ=255)
                                                                                                                  cTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggc                                                  <  1:1240236/109‑1 (MQ=255)
                                                                                                                  cTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggc                                                  >  2:1240236/1‑109 (MQ=255)
                                                                                                                   ttCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGc                   <  1:422841/139‑1 (MQ=255)
                                                                                                                    tCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCa                                                       <  2:227364/102‑1 (MQ=255)
                                                                                                                    tCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCa                                                       >  1:227364/1‑102 (MQ=255)
                                                                                                                            gAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCcac          >  2:1411584/1‑139 (MQ=255)
                                                                                                                                  gCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAt                                                              <  2:1773492/81‑1 (MQ=255)
                                                                                                                                  gCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAt                                                              >  1:1773492/1‑81 (MQ=255)
                                                                                                                                    aGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGccc  <  1:1653002/139‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                       
CGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCC  >  NC_000913/1006356‑1006626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: