Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,893,928 | G→A | *424* (TAG→TAA) A4T (GCC→ACC) |
ygcN → ygcO → |
putative oxidoreductase putative 4Fe‑4S cluster‑containing protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,893,928 | 0 | G | A | 100.0% | 238.6 / NA | 74 | *424* (TAG→TAA) A4T (GCC→ACC) | ygcN ygcO | putative oxidoreductase putative 4Fe‑4S cluster‑containing protein |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (38/36); total (38/36) |
ATATTTCCCGCGATTTATGGGATCAGGGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACG > NC_000913/2893795‑2894061 | atatTTCCCGCGATTTATGGGATCAGGGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCGGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGt > 1:1199529/1‑139 (MQ=255) gcgATTTATGGGATCAGGGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTgg > 2:146667/1‑139 (MQ=255) cAGGGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTAAGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATgc > 2:1299266/1‑139 (MQ=255) ggTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGcgcc > 1:792303/1‑139 (MQ=255) gTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGcgccg > 2:94973/1‑139 (MQ=255) aTAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGTTGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGatt > 1:1118496‑M1/1‑136 (MQ=255) aTAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGatt > 2:16065‑M1/1‑136 (MQ=255) aTAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGatt > 1:1659645‑M1/1‑136 (MQ=255) aCCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttc < 1:94973‑M1/139‑8 (MQ=255) tGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccga < 2:792303‑M1/139‑11 (MQ=255) gTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGat < 1:1377969‑M1/132‑3 (MQ=255) gTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGat > 2:1377969‑M1/1‑130 (MQ=255) ttCCACCGCTGCGCCAGTTATTCTGGCATCA‑TTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTg < 1:1319172/107‑1 (MQ=255) ttCCACCGCTGCGCCAGTTATTCTGGCATCA‑TTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTg > 2:1319172/1‑107 (MQ=255) tCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGTATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctg > 1:1437557‑M1/1‑126 (MQ=255) cACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgac < 1:1509998‑M1/139‑16 (MQ=255) gCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGa < 2:1144451‑M1/121‑2 (MQ=255) gCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGa > 1:1144451‑M1/1‑120 (MQ=255) tGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgtt < 2:1199529‑M1/139‑22 (MQ=255) gcgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGgcg > 1:1671893/1‑101 (MQ=255) gcgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGgcg < 2:1671893/101‑1 (MQ=255) gcgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttg > 2:685‑M1/1‑117 (MQ=255) gTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgcc > 2:1090844‑M1/1‑111 (MQ=255) gTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgag < 2:310831‑M1/135‑25 (MQ=255) gTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgag > 1:310831‑M1/1‑111 (MQ=255) aTTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccaga < 2:1659645‑M1/139‑32 (MQ=255) ggCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGcgccg < 2:1180736/103‑1 (MQ=255) ggCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGcgccg > 1:1180736/1‑103 (MQ=255) atcatTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaa < 1:1299266‑M1/139‑40 (MQ=255) atTTACGTCGTCACGGCCTGTGGTATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacgg < 2:1437557‑M1/139‑43 (MQ=255) tttACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggt < 1:1090844‑M1/139‑44 (MQ=255) gtcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGt > 2:117679/1‑61 (MQ=255) gtcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGt < 1:117679/61‑1 (MQ=255) tcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacg > 2:598312‑M1/1‑87 (MQ=255) tcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacg > 1:933863‑M1/1‑87 (MQ=255) tcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacg > 2:16710‑M1/1‑87 (MQ=255) tgtgGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccg < 1:16065‑M1/139‑61 (MQ=255) gtgGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccgg > 2:968984‑M1/1‑78 (MQ=255) tgGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggc > 1:1412952‑M1/1‑77 (MQ=255) gCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcag < 2:933863‑M1/139‑65 (MQ=255) cTGGCGGGCGATGTTATCTGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtct > 2:1206647‑M1/1‑71 (MQ=255) ggcgggcgATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgcca < 1:82665‑M1/98‑30 (MQ=255) ggcgggcgATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgcca > 2:82665‑M1/1‑69 (MQ=255) gcgggcgATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtctttt < 1:16710‑M1/139‑72 (MQ=255) cgggcgATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttt > 1:698443‑M1/1‑67 (MQ=255) cgggcgATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggca < 1:1320676‑M1/103‑37 (MQ=255) cgggcgATGTTATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggca > 2:1320676‑M1/1‑67 (MQ=255) ttATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaa > 2:1806845‑M1/1‑58 (MQ=255) ttATCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaa < 1:1806845‑M1/97‑40 (MQ=255) tCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccg < 1:685‑M1/139‑85 (MQ=255) tCAGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCAGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccg < 1:97029‑M1/139‑85 (MQ=255) aGGAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccgga < 2:1412952‑M1/139‑87 (MQ=255) gAGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaag < 1:598312‑M1/139‑89 (MQ=255) aGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaagg > 2:828204‑M1/1‑50 (MQ=255) aGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgag > 1:257773‑M1/1‑50 (MQ=255) aGTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgag < 2:257773‑M1/74‑25 (MQ=255) gTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggt > 1:178603‑M1/1‑49 (MQ=255) gTCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggt < 2:178603‑M1/92‑44 (MQ=255) tCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggta > 2:2461‑M1/1‑48 (MQ=255) tCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaa > 1:1393601‑M1/1‑48 (MQ=255) tCTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaa < 2:1393601‑M1/87‑40 (MQ=255) cTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaa < 1:968984‑M1/139‑93 (MQ=255) cTGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaa < 1:9083‑M1/139‑93 (MQ=255) tGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgct < 2:701690‑M1/123‑78 (MQ=255) tGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgct > 1:701690‑M1/1‑46 (MQ=255) tGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgc < 2:215172‑M1/99‑54 (MQ=255) tGCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgc > 1:215172‑M1/1‑46 (MQ=255) gCGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaact < 1:828204‑M1/139‑95 (MQ=255) cGATG‑‑TCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaactt < 1:2461‑M1/139‑96 (MQ=255) cTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtat > 2:1781400‑M1/1‑38 (MQ=255) tGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaac > 1:1599586‑M1/1‑37 (MQ=255) tGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgccagacggcagaacggttgattaac < 2:1599586‑M1/88‑52 (MQ=255) tGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgcca < 2:1215094‑M1/66‑30 (MQ=255) tGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGattgttccggctgactccgttgagcgcca > 1:1215094‑M1/1‑37 (MQ=255) | ATATTTCCCGCGATTTATGGGATCAGGGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATG‑‑TCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACG > NC_000913/2893795‑2894061 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |