Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,447,891 G→A *1260* (TAG→TAA tamB → translocation and assembly module for autotransporter export, inner membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,447,8910GA100.0% 351.5 / NA 108*1260* (TAG→TAAtamBtranslocation and assembly module for autotransporter export, inner membrane subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (54/54);  total (54/54)

Only 100 of 108 total aligned reads displayed.

CAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTTGCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCG  >  NC_000913/4447754‑4448023
                                                                                                                                         |                                                                                                                                    
     gAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCg                                                                                                                               <  2:1748655/139‑1 (MQ=255)
                tGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCt                                                                                                                    >  2:843601/1‑139 (MQ=255)
                 gggTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTa                                                                                                                   <  1:843601/139‑1 (MQ=255)
                                tataGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACgg                                                                                                                >  1:411463/1‑127 (MQ=255)
                                tataGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACgg                                                                                                                <  2:411463/127‑1 (MQ=255)
                                tataGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCca                                                                                                    >  2:1191189/1‑139 (MQ=255)
                                  taGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCcaca                                                                                                  >  1:218335/1‑139 (MQ=255)
                                  taGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCcaca                                                                                                  >  2:1701055/1‑139 (MQ=255)
                                          cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACgg                                                                                                                >  2:1275749/1‑117 (MQ=255)
                                          cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACgg                                                                                                                <  1:1275749/117‑1 (MQ=255)
                                          cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc                                                                                          >  1:307224/1‑139 (MQ=255)
                                          cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc                                                                                          >  1:641995/1‑139 (MQ=255)
                                          cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc                                                                                          >  2:1426619/1‑139 (MQ=255)
                                          cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc                                                                                          >  1:1331569/1‑139 (MQ=255)
                                          cTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc                                                                                          >  1:1004089/1‑139 (MQ=255)
                                            cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        <  2:1678931/139‑1 (MQ=255)
                                            cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        <  2:662416/139‑1 (MQ=255)
                                            cACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        <  2:641995/139‑1 (MQ=255)
                                              cgttacgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACa                                                                                      >  2:628792/1‑139 (MQ=255)
                                               gttacgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAg                                                                                     >  2:525183/1‑139 (MQ=255)
                                                   cgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAAt                                                                                                                                  >  2:1751302/1‑90 (MQ=255)
                                                   cgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAAt                                                                                                                                  <  1:1751302/90‑1 (MQ=255)
                                                   cgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCAc                                                                                 >  1:1437972/1‑139 (MQ=255)
                                                   cgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCAc                                                                                 >  1:666792/1‑139 (MQ=255)
                                                   cgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTG‑‑GTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACgg                                                                                                                >  1:1075119/1‑106 (MQ=255)
                                                   cgttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTG‑‑GTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACgg                                                                                                                <  2:1075119/106‑1 (MQ=255)
                                                    gttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGc                                                                                                                                >  2:109617/1‑91 (MQ=255)
                                                    gttaTCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGc                                                                                                                                <  1:109617/91‑1 (MQ=255)
                                                        tCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGAt                                                                            <  2:126937/139‑1 (MQ=255)
                                                        tCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGAt                                                                            <  1:525183/139‑1 (MQ=255)
                                                         cGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAGTGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATg                                                                           >  1:1812620/1‑139 (MQ=255)
                                                              gATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCaa                                                                      <  1:1426619/139‑1 (MQ=255)
                                                              gATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCaa                                                                      <  2:666792/139‑1 (MQ=255)
                                                                  ccTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGcc                                                                  <  1:1701055/139‑1 (MQ=255)
                                                                   cTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGccc                                                                 <  2:665369/139‑1 (MQ=255)
                                                                            atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGcc                                                                                                     <  2:1264126/94‑1 (MQ=255)
                                                                            atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGcc                                                                                                     >  1:1264126/1‑94 (MQ=255)
                                                                            atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCaa                                                                      <  2:411680/125‑1 (MQ=255)
                                                                            atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTgg                                                        >  1:36813/1‑139 (MQ=255)
                                                                            atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTgg                                                        <  2:307224/139‑1 (MQ=255)
                                                                            atCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTgg                                                        >  2:1536548/1‑139 (MQ=255)
                                                                                ggAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        <  2:409832/103‑1 (MQ=255)
                                                                                ggAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        <  1:1139023/103‑1 (MQ=255)
                                                                                ggAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        >  2:1139023/1‑103 (MQ=255)
                                                                                ggAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        >  1:409832/1‑103 (MQ=255)
                                                                                ggAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGa                                                    >  1:1551212/1‑139 (MQ=255)
                                                                                 gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGc                                                                                                                                >  1:1250641/1‑62 (MQ=255)
                                                                                 gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGc                                                                                                                                <  2:1250641/62‑1 (MQ=255)
                                                                                 gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc                                                                                          <  2:268787/100‑1 (MQ=255)
                                                                                 gAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGc                                                                                          >  1:268787/1‑100 (MQ=255)
                                                                                  aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        <  1:676885/101‑1 (MQ=255)
                                                                                  aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        >  2:676885/1‑101 (MQ=255)
                                                                                  aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTc                                                                                   >  1:1531610/1‑106 (MQ=255)
                                                                                  aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTc                                                                                   <  2:1531610/106‑1 (MQ=255)
                                                                                  aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAtt                                                  >  1:1677453/1‑139 (MQ=255)
                                                                                  aaGCCGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGAtt                                                  >  2:639557/1‑139 (MQ=255)
                                                                                     ccGTGTCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCa                                               >  2:1195910/1‑139 (MQ=255)
                                                                                       gtgtCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGt                                             >  2:1329261/1‑139 (MQ=255)
                                                                                       gtgtCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGt                                             <  1:1195910/139‑1 (MQ=255)
                                                                                        tgtCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGt                                                                                    <  2:313962/99‑1 (MQ=255)
                                                                                        tgtCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGt                                                                                    >  1:313962/1‑99 (MQ=255)
                                                                                        tgtCTGGTGTAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTa                                            >  2:1656347/1‑139 (MQ=255)
                                                                                                 tAGACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACt                                   <  2:1677453/139‑1 (MQ=255)
                                                                                                   gACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGa                                                                          >  2:749843/1‑98 (MQ=255)
                                                                                                   gACCAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGa                                                                          <  1:749843/98‑1 (MQ=255)
                                                                                                      cAGGCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAg                              <  1:1191189/139‑1 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACg                                                                                                       <  2:1604240/64‑1 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACg                                                                                                       >  1:1604240/1‑64 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGAcc                                                                        <  2:1562322/95‑1 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGAcc                                                                        >  1:1562322/1‑95 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCaa                                                                      <  1:711977/97‑1 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCaa                                                                      >  2:711977/1‑97 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGcc                                                                  <  1:364504/101‑1 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGcc                                                                  >  2:364504/1‑101 (MQ=255)
                                                                                                        ggCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGtt                            >  2:1553387/1‑139 (MQ=255)
                                                                                                         gCACTGGATTGCTCTATCAGTTCGAGTTTTAACAAt                                                                                                                                  <  1:33050/36‑1 (MQ=255)
                                                                                                         gCACTGGATTGCTCTATCAGTTCGAGTTTTAACAAt                                                                                                                                  >  2:33050/1‑36 (MQ=255)
                                                                                                         gCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCacaaaca                                                                                              >  2:1176778/1‑72 (MQ=255)
                                                                                                         gCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCacaaaca                                                                                              <  1:1176778/72‑1 (MQ=255)
                                                                                                         gCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        <  2:954118/78‑1 (MQ=255)
                                                                                                         gCACTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCaa                                                                                        >  1:954118/1‑78 (MQ=255)
                                                                                                           aCTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGta                         <  1:639557/139‑1 (MQ=255)
                                                                                                           aCTGGATTGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGta                         <  1:628792/139‑1 (MQ=255)
                                                                                                                   tGCTCTATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTg                  <  1:1553387/139‑1 (MQ=255)
                                                                                                                     ctctATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGcc                                                                  >  1:845533/1‑89 (MQ=255)
                                                                                                                     ctctATCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGcc                                                                  <  2:845533/89‑1 (MQ=255)
                                                                                                                          tCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGc                                                                                                      >  1:534443/1‑48 (MQ=255)
                                                                                                                          tCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGc                                                                                                      <  2:534443/48‑1 (MQ=255)
                                                                                                                          tCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTAt                                           >  2:243459/1‑107 (MQ=255)
                                                                                                                          tCAGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTAt                                           <  1:243459/107‑1 (MQ=255)
                                                                                                                            aGTTCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTAt         <  1:1536548/139‑1 (MQ=255)
                                                                                                                              ttCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATcc       <  1:1656347/139‑1 (MQ=255)
                                                                                                                               tCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTa                                                                                                         >  2:27396/1‑40 (MQ=255)
                                                                                                                               tCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTa                                                                                                         <  1:27396/40‑1 (MQ=255)
                                                                                                                               tCGAGTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCa      >  1:1117201/1‑139 (MQ=255)
                                                                                                                                cGAGTTTTAACAATGCGAATATTTGTCTACGACAGTTTACGCCACAAACAAGGc                                                                                          <  2:1010446/54‑1 (MQ=255)
                                                                                                                                cGAGTTTTAACAATGCGAATATTTGTCTACGACAGTTTACGCCACAAACAAGGc                                                                                          >  1:1010446/1‑54 (MQ=255)
                                                                                                                                  aGTTTTAACAATGCGAATATTTGTCTACGGCAGttt                                                                                                          >  2:1150656/1‑36 (MQ=255)
                                                                                                                                  aGTTTTAACAATGCGAATATTTGTCTACGGCAGttt                                                                                                          <  1:1150656/36‑1 (MQ=255)
                                                                                                                                   gTTTTAACAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGgcg  <  2:36813/139‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                    
CAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTTGCTCTATCAGTTCGAGTTTTAGCAATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCG  >  NC_000913/4447754‑4448023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: