| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 980,848 | (A)6→5 | intergenic (+62/‑199) | mukB → / → ldtD | chromosome condensin MukBEF, ATPase and DNA‑binding subunit/murein L,D‑transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 980,843 | 0 | A | . | 100.0% | 117.5 / NA | 29 | intergenic (+57/‑204) | mukB/ldtD | chromosome condensin MukBEF, ATPase and DNA‑binding subunit/murein L,D‑transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (9/20); total (9/20) | |||||||||||
TCGGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACTAAAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATA > NC_000913/980710‑980962 | tcgGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACTaaaaag > 1:1229019/1‑138 (MQ=255)tcgGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACTaaaaag < 1:395644/139‑2 (MQ=255)tcgGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACTaaaaag > 2:1102660/1‑138 (MQ=255) tGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACg < 2:446010/135‑1 (MQ=255) tGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACg > 1:446010/1‑135 (MQ=255) ccTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTaaa < 2:766429/139‑1 (MQ=255) cTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAAc < 2:764210/139‑1 (MQ=255) aaCGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAActtct < 2:589974/139‑1 (MQ=255) aaCGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAActtct < 1:224486/139‑1 (MQ=255) aaCGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAActtct < 2:1268649/139‑1 (MQ=255) ttCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACa < 2:1329483/139‑1 (MQ=255) tCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCCTTTCTTTAAACTTCTTTACAt < 1:1102660/139‑1 (MQ=255) gAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGt < 2:1229019/139‑1 (MQ=255) aaCTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGtt < 1:162528/139‑1 (MQ=255) ttCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATc < 1:291610/139‑1 (MQ=255) ctcAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCgg < 2:203287/139‑1 (MQ=255) gAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCgg > 2:517142/1‑132 (MQ=255) gAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCgg < 1:517142/132‑1 (MQ=255) gTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACTaaaaag > 2:319396/1‑66 (MQ=255) gTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACTaaaaag < 1:319396/67‑2 (MQ=255) tAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATAc > 1:738156/1‑139 (MQ=255) aGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTtat > 2:945582/1‑127 (MQ=255) aGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTtat < 1:945582/127‑1 (MQ=255) ggcggcAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCt < 2:846705/75‑1 (MQ=255) ggcggcAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCt > 1:846705/1‑75 (MQ=255) cagcaATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATc < 2:183654/112‑1 (MQ=255) cagcaATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATc > 1:183654/1‑112 (MQ=255) ccTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACa < 2:931659/79‑1 (MQ=255) ccTTTTCTTTTTCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTGAAACTTCTTTACa > 1:931659/1‑79 (MQ=255) tCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCt > 1:882713/1‑48 (MQ=255) tCCGAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCt < 2:882713/48‑1 (MQ=39) gAAAACTCCGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATa < 2:1197263/139‑1 (MQ=255) cGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCgg > 2:1028514/1‑81 (MQ=255) cGTTTCTGCACT‑AAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCgg < 1:1028514/81‑1 (MQ=255) | TCGGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAAAATTAAGGCGGCAGCAATGCCGCCTTTTCTTTTTCCGAAAACTCCGTTTCTGCACTAAAAAAGTGGCACATTACGGCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATA > NC_000913/980710‑980962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |