| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,264,919 | C→T | D402D (GAC→GAT) | hemA → | glutamyl tRNA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,264,919 | 0 | C | T | 100.0% | 104.9 / NA | 33 | D402D (GAC→GAT) | hemA | glutamyl tRNA reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (17/16); total (17/16) | |||||||||||
CCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAGCAGTACATCATTTTCTTTTTTTACAGGGTGCATTTACGCCTATGAAGCCTTCTATCGTTGCCAAACTGGAAGCCCTG > NC_000913/1264795‑1265047 | ccAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATaacgaacg < 2:561238/139‑1 (MQ=255) gcggcgACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCgg < 1:100703/139‑1 (MQ=255) gATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGcc > 2:1280259/1‑109 (MQ=255) gATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGcc < 1:1280259/109‑1 (MQ=255) gATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCt > 1:1164706/1‑139 (MQ=255) ggCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCtttttt > 1:473214/1‑139 (MQ=255) gCATGGATACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTg > 2:328073/1‑93 (MQ=255) gCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTg < 1:328073/93‑1 (MQ=255) aaaCTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAggg > 1:994081/1‑139 (MQ=255) tGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTaa < 2:731693/107‑2 (MQ=255) tGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTaa > 1:731693/1‑106 (MQ=255) tAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggag < 1:310348‑M1/139‑7 (MQ=255) tAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggag < 2:473214‑M1/139‑7 (MQ=255) tGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAg < 2:402307/114‑1 (MQ=255) tGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAg < 2:402308/114‑1 (MQ=255) tGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAg > 1:402308/1‑114 (MQ=255) tGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAg > 1:402307/1‑114 (MQ=255) tGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggaggaataatggaatatc > 1:929954‑M1/1‑118 (MQ=255) tGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggaggaataatggaatatc > 2:554215‑M1/1‑118 (MQ=255) aaCGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAg < 2:553078/79‑1 (MQ=255) aaCGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAg > 1:553078/1‑79 (MQ=255) aaCGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggaggaataatgg > 1:1266274‑M1/1‑112 (MQ=255) aaCGAAATCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggaggaataatgg < 2:1266274‑M1/127‑16 (MQ=255) tCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGc < 2:969642/67‑1 (MQ=255) tCACTTCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGc > 1:969642/1‑67 (MQ=255) tCAACAGGCCGCCCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggaggaataatggaatatcaacactggttacgtgaag > 1:703317‑M1/1‑100 (MQ=255) gccgccCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGc > 1:858214/1‑55 (MQ=255) gccgccCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGc < 2:858214/55‑1 (MQ=255) ccgccCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAACAGTACATCATTTTCTTTTTTTACAGGGTGgaggaggaataatggaatatcaacactggttacgtgaagcaataagc < 2:929954‑M1/139‑48 (MQ=255) cgccCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGt < 2:147396/59‑1 (MQ=255) cgccCGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGt > 1:147396/1‑59 (MQ=255) cGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCgg > 2:1241261/1‑47 (MQ=255) cGTGATGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCgg < 1:1241261/47‑1 (MQ=255) | CCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAGCAGTACATCATTTTCTTTTTTTACAGGGTGCATTTACGCCTATGAAGCCTTCTATCGTTGCCAAACTGGAAGCCCTG > NC_000913/1264795‑1265047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |