| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,199,998 | A→G | pseudogene (677/948 nt) | yehH → | DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,199,998 | 0 | A | G | 100.0% | 177.8 / NA | 49 | pseudogene (677/948 nt) | yehH | DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (28/21); total (28/21) | |||||||||||
ACCGTTCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAAGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAGCGCTGAGCAGCT > NC_000913/2199864‑2200127 | accGTTCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGc < 2:1046279/139‑1 (MQ=255) tCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAAcc < 1:802402/139‑1 (MQ=255) tCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAAcc > 2:802402/1‑139 (MQ=255) tCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAAcc > 2:580434/1‑139 (MQ=255) tCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAAcc > 2:684885/1‑139 (MQ=255) aaCAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGa > 1:1301573/1‑139 (MQ=255) cGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCggatgg < 1:684885/139‑1 (MQ=255) aCAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCa > 1:50713/1‑139 (MQ=255) aaGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAAcc > 2:1226798/1‑139 (MQ=255) gCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACcac < 2:1193125/103‑1 (MQ=255) gCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACcac > 1:1193125/1‑103 (MQ=255) cgcAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTc > 2:12490/1‑139 (MQ=255) cAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATg > 1:215009/1‑95 (MQ=255) cAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATg < 2:215009/95‑1 (MQ=255) tGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCAt < 2:1301573/139‑1 (MQ=255) cccGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGa > 2:789140/1‑139 (MQ=255) ccGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGaa > 1:75779/1‑139 (MQ=255) cGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCg < 2:924103/70‑1 (MQ=255) cGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCg > 1:924103/1‑70 (MQ=255) caggcagAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCggatgg > 2:792217/1‑92 (MQ=255) caggcagAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGa > 2:726556/1‑139 (MQ=255) caggcagAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGAGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCCGGATCggacgg < 1:792217/92‑1 (MQ=255) gcagAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGAt > 1:877463/1‑82 (MQ=255) gcagAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGAt < 2:877463/82‑1 (MQ=255) aaaTGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGc < 2:10806/105‑1 (MQ=255) aaaTGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGc > 1:10806/1‑105 (MQ=255) cccGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGTCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTa > 1:931803/1‑139 (MQ=255) cccGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTa > 2:210304/1‑139 (MQ=255) cccGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTa > 1:232375/1‑139 (MQ=255) tcgggggTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATg > 2:103887/6‑60 (MQ=255) tcgggggTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATg < 1:103887/55‑1 (MQ=255) cGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCt < 1:71874/99‑1 (MQ=255) cGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCt > 2:71874/1‑99 (MQ=255) aGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCa > 1:1260195/1‑139 (MQ=255) gTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCg > 2:118553/1‑37 (MQ=255) gTCATGGGGCTGGCGAATAAAGGCTGGATAAGGGGCg < 1:118553/37‑1 (MQ=255) aTGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCgga < 2:983819/60‑1 (MQ=255) aTGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCgga > 1:983819/1‑60 (MQ=255) aTGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCg > 2:1106246/1‑139 (MQ=255) tGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCggatgg > 1:1327734/1‑62 (MQ=255) tGGGGCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCggatgg < 2:1327734/62‑1 (MQ=255) gggCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTa > 1:463060/1‑90 (MQ=255) gggCTGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTa < 2:463060/90‑1 (MQ=255) tGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGa < 1:54287/48‑1 (MQ=255) tGGCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGa > 2:54287/1‑48 (MQ=255) gCGAATAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAgcg < 1:580434/139‑1 (MQ=255) tAAAGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAGCGCTGag < 1:371257/139‑1 (MQ=255) aaaGGCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAGCGCTGagc < 2:555012/139‑1 (MQ=255) gCTGGATAAGGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAGCGCTGAGCAGct < 1:1226798/139‑1 (MQ=255) | ACCGTTCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAAGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAGCGCTGAGCAGCT > NC_000913/2199864‑2200127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |