| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,495,332 | A→G | L293P (CTG→CCG) | ahr ← | broad specificity NADPH‑dependent aldehyde reductase, Zn‑containing |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,495,332 | 0 | A | G | 97.4% | 135.0 / NA | 39 | L293P (CTG→CCG) | ahr | broad specificity NADPH‑dependent aldehyde reductase, Zn‑containing |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (17/21); minor base T (1/0); total (18/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGAAATTACCGCCATAGGTCAGCGCC > NC_000913/4495214‑4495460 | gcgGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTa < 2:1278182/139‑1 (MQ=255) cgGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAg < 2:638528/139‑1 (MQ=255) ggTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGc > 1:1006566/1‑128 (MQ=255) ggTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGc < 2:1006566/128‑1 (MQ=255) gTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCa < 2:1070311/139‑1 (MQ=255) gcCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCag > 1:1101537/1‑139 (MQ=255) gcCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCag > 2:331022/1‑139 (MQ=255) ccTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCaga < 2:1101537/139‑1 (MQ=255) ccTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCaga < 2:1224020/139‑1 (MQ=255) cgcACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGAt > 2:615448/1‑139 (MQ=255) cacaTGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCg > 2:206904/1‑139 (MQ=255) aTGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGTCGGTAGCAGAACCAGAGACGCTGCGATCGccc > 1:522107/1‑139 (MQ=255) tGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCaa < 1:331022/139‑1 (MQ=255) gCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACg > 1:1191906/1‑139 (MQ=255) gtcgtTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTa > 2:184969/1‑139 (MQ=255) cgtTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGGCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTaaa > 2:958266/1‑139 (MQ=255) tAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGc < 1:615448/139‑1 (MQ=255) ttCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAg < 2:873085/74‑1 (MQ=255) ttCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAg > 1:873085/1‑74 (MQ=255) ttCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAgg > 2:1146247/1‑116 (MQ=255) ttCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAgg < 1:1146247/116‑1 (MQ=255) tCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCacc < 2:634198/139‑1 (MQ=255) tCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCacc > 1:1309443/1‑139 (MQ=255) ggCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGTCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCaccga < 2:522107/139‑1 (MQ=255) ggCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGAt < 1:657265/85‑1 (MQ=255) ggCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGAt > 2:657265/1‑85 (MQ=255) ggCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGCCTCATAAGGCGTGCCGGTAGCAGAACCAGAGTCGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCaccga < 1:889881/139‑1 (MQ=255) aaCCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTa < 1:206904/139‑1 (MQ=255) tgcGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGGCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGAAAtt < 1:958266/139‑1 (MQ=255) tgcGGGCGGCAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCaccga < 2:794256/126‑1 (MQ=255) tgagagcggcAAAACGCATCAGCTTACGCTGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCaccga > 1:794256/6‑126 (MQ=255) ggcggcAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGc < 2:1132388/48‑1 (MQ=255) ggcggcAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGc > 1:1132388/1‑48 (MQ=255) ggcggcAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGcc > 1:310189/1‑91 (MQ=255) ggcggcAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGcc < 2:310189/91‑1 (MQ=255) ggcggcAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGAAATTAc < 2:654727/137‑1 (MQ=255) ggcggcAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGAAATTAc > 1:654727/1‑137 (MQ=255) ggcggcAAAACGCATCAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGAAATTACCg > 2:1331629/1‑139 (MQ=255) cAGCTTACGCGGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGAAATTACCGCCATAGGTCAGCGcc < 2:1309443/139‑1 (MQ=255) | GCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCGACATCGGGAACAGTTCGGTGGTCGGCGCAACCTTGCTGCGGGCGGCAAAACGCATCAGCTTACGCAGCTCATAAGGCGTGCCGGTAGCAGAACCAGAGACGCTGCGATCGCCCGCAATTAACGTAAAGGCCGGAACAGACAGCGGCGTGAGAACCGCACCGACCGTATGGAAATTACCGCCATAGGTCAGCGCC > NC_000913/4495214‑4495460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |