Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,604,202 G→A *242* (TAG→TAA) 
E15K (GAA→AAA) 		 yjjQ →
bglJ →		 putative transcriptional regulator
bgl operon transcriptional activator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,604,2020GA100.0% 271.3 / NA 82*242* (TAG→TAA) 
E15K (GAA→AAA) 		yjjQ
bglJ		putative transcriptional regulator
bgl operon transcriptional activator
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (38/44);  total (38/44)

CAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGAT  >  NC_000913/4604066‑4604320
                                                                                                                                        |                                                                                                                      
cAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATaaaa                                                                                                                      >  1:624304/1‑139 (MQ=255)
    tCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  <  1:678077/139‑1 (MQ=255)
    tCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  <  2:624304/139‑1 (MQ=255)
         gCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             <  1:391984/139‑1 (MQ=255)
         gCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             <  2:506083/139‑1 (MQ=255)
             cGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGa                                                                                                         >  1:1244589/1‑139 (MQ=255)
                   aaTGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAgtagta                                                                                                   <  2:1221725/139‑1 (MQ=255)
                      gTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCg                                                                                                <  2:843737/139‑1 (MQ=255)
                         tGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  >  1:1164314/1‑118 (MQ=255)
                         tGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  <  2:1164314/118‑1 (MQ=255)
                         tGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  <  2:439395/118‑1 (MQ=255)
                         tGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  >  1:439395/1‑118 (MQ=255)
                         tGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGag                                                                                                        >  2:282213/1‑128 (MQ=255)
                         tGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGag                                                                                                        <  1:282213/128‑1 (MQ=255)
                                       gcgcgcAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTc                                                                               >  2:1006964/1‑139 (MQ=255)
                                        cgcgcAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGagt                                                                                                       <  2:107281/114‑1 (MQ=255)
                                        cgcgcAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGagt                                                                                                       >  1:107281/1‑114 (MQ=255)
                                          cgcAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGa                                                                            >  1:911512/1‑139 (MQ=255)
                                          cgcAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGa                                                                            >  1:1336618/1‑139 (MQ=255)
                                          cgcAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGa                                                                            <  1:1197084/139‑1 (MQ=255)
                                            cAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGaaa                                                                          >  1:258481/1‑139 (MQ=255)
                                                         aacttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCa                                                                                                            >  2:822977/1‑92 (MQ=255)
                                                         aacttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCa                                                                                                            <  1:822977/92‑1 (MQ=255)
                                                         aacttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGagt                                                                                                       >  2:1341866/1‑97 (MQ=255)
                                                         aacttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGagt                                                                                                       <  1:1341866/97‑1 (MQ=255)
                                                           cttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             <  2:872521/89‑1 (MQ=255)
                                                           cttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             >  1:872521/1‑89 (MQ=255)
                                                           cttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGag                                                                                                        <  1:1342856/94‑1 (MQ=255)
                                                           cttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGag                                                                                                        >  2:1342856/1‑94 (MQ=255)
                                                           cttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAAccc                                                           >  2:975073/1‑139 (MQ=255)
                                                                cttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTtata                                                      <  2:1336618/139‑1 (MQ=255)
                                                                cttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTtata                                                      <  1:975073/139‑1 (MQ=255)
                                                                 ttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATaa                                                     <  1:1006964/139‑1 (MQ=255)
                                                                   gCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGc                                                   >  2:506333/1‑139 (MQ=255)
                                                                    ccTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCt                                                  >  1:599876/1‑139 (MQ=255)
                                                                     cTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGGCGAATTAAGAAGATAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 <  2:865397/139‑1 (MQ=255)
                                                                     cTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 <  2:258481/139‑1 (MQ=255)
                                                                     cTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 <  1:730269/139‑1 (MQ=255)
                                                                     cTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 <  1:569919/139‑1 (MQ=255)
                                                                      ttCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATg                                                                                                          >  1:860871/1‑81 (MQ=255)
                                                                      ttCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATg                                                                                                          <  2:860871/81‑1 (MQ=255)
                                                                      ttCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTcc                                                <  1:774226/139‑1 (MQ=255)
                                                                             tATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             >  1:1325441/1‑71 (MQ=255)
                                                                             tATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             <  2:1325441/71‑1 (MQ=255)
                                                                                   gaTGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAg                                   >  1:365350/1‑139 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  >  1:488043/1‑58 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  <  2:488043/58‑1 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             >  2:1175596/1‑63 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             <  1:1175596/63‑1 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGa                                                                                                         >  1:852431/1‑67 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGa                                                                                                         <  2:852431/67‑1 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCggg                                                                 <  2:373465/107‑1 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCggg                                                                 >  1:373465/1‑107 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTaa                                                              <  2:1196804/110‑1 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTaa                                                              >  1:1196804/1‑110 (MQ=255)
                                                                                     tGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTc                                 >  2:1028774/1‑139 (MQ=255)
                                                                                          cAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGttt                                                                      <  1:363972/97‑1 (MQ=255)
                                                                                          cAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGttt                                                                      >  2:363972/1‑97 (MQ=255)
                                                                                          cAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAg                            <  2:599876/139‑1 (MQ=255)
                                                                                                  aaCACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCA‑ACCTATACCAGTCAGGAGTCATTTCAg                   >  1:122532/1‑139 (MQ=255)
                                                                                                       aGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  >  2:1129047/1‑40 (MQ=255)
                                                                                                       aGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAAt                                                                                                                  <  1:1129047/40‑1 (MQ=255)
                                                                                                       aGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             <  1:737027/45‑1 (MQ=255)
                                                                                                       aGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTc                                                                                                             >  2:737027/1‑45 (MQ=255)
                                                                                                       aGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 <  2:575943/105‑1 (MQ=255)
                                                                                                       aGCCGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 >  1:575943/1‑105 (MQ=255)
                                                                                                         ccGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGt                                                                                                              <  2:302894/42‑1 (MQ=255)
                                                                                                         ccGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGt                                                                                                              >  1:302894/1‑42 (MQ=255)
                                                                                                         ccGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCAtt                       <  2:176990/129‑1 (MQ=255)
                                                                                                         ccGAATTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCAtt                       >  1:176990/1‑129 (MQ=255)
                                                                                                            aaTTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTaa                                                              >  2:1084049/1‑87 (MQ=255)
                                                                                                            aaTTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTaa                                                              <  1:1084049/87‑1 (MQ=255)
                                                                                                            aaTTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTtat                                                       <  2:1252560/94‑1 (MQ=255)
                                                                                                            aaTTAAGAAGAGAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTtat                                                       >  1:1252560/1‑94 (MQ=255)
                                                                                                                    agagAAATGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGAt  <  2:911512/139‑1 (MQ=255)
                                                                                                                        aaaTGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTtat                                                       >  1:179944/1‑82 (MQ=255)
                                                                                                                        aaaTGTCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTtat                                                       <  2:179944/82‑1 (MQ=255)
                                                                                                                             tCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGTGGGTAACCCTTATAAg                                                    <  2:349715/80‑1 (MQ=255)
                                                                                                                             tCGCACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGTGGGTAACCCTTATAAg                                                    >  1:349715/1‑80 (MQ=255)
                                                                                                                                cACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGc                                                   >  1:536232/1‑78 (MQ=255)
                                                                                                                                cACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGc                                                   <  2:536232/78‑1 (MQ=255)
                                                                                                                                cACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 >  1:1072782/1‑80 (MQ=255)
                                                                                                                                cACTCATAAAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTc                                                 <  2:1072782/80‑1 (MQ=255)
                                                                                                                                        |                                                                                                                      
CAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGAT  >  NC_000913/4604066‑4604320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑