Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,993,600 G→C 10.6% L53V (CTG→GTG)  yecA ← UPF0149 family protein YecA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077791,993,6000GC10.6% 304.7 / 2.4 102L53V (CTG→GTG) yecAUPF0149 family protein YecA
Reads supporting (aligned to +/- strand):  ref base G (66/23);  new base C (3/9);  total (69/33)
Fisher's exact test for biased strand distribution p-value = 1.37e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 102 total aligned reads displayed.

GACCAGTCAGAAAGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCAGAGATACTTTTTGAGTGGCTTT  >  NC_007779/1993365‑1993837
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                     
gACCAGTCAGAAAGTGCCACGCCCCGCATATAGCCAAAGCCCCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCa                                                                                                                                                                                                                                                    <  1:89484/239‑1 (MQ=255)
gACCAGTCAGAAAGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCa                                                                                                                                                                                                                                                    <  1:1612232/239‑1 (MQ=255)
gACCAGTCAGAAAGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCa                                                                                                                                                                                                                                                    <  2:1874035/239‑1 (MQ=255)
 aCCAGTCAAAAGGTACCACGTCACGCAAATGGTCAACACACATCGCCTGAACGA‑CGTGCAGCTTCCTCCCATCATCTTCTCGCAAGCCGAATATCGTCTAAATCAGCTCCGTGAATCCGTTCAGACCCCCTGCGGTTTCGGCCCTCTGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGTCCAGCGCGGCCCATCGTCAGCCCCACCCCA‑CTCGGCAAC‑CAGCCAc                                                                                                                                                                                                                                                   <  2:1863804/239‑1 (MQ=255)
  ccAGTCAGAAAGTGCCACGCCCCGCATATAGCCAAAGCACCACCCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCGCATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCAc                                                                                                                                                                                                                                                   <  2:492744/238‑1 (MQ=255)
       cAGAAAGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCAAAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CCGcctgagg                                                                                                                                                                                                                                                <  1:40493/236‑6 (MQ=255)
       cAGAAAGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAAGCGT‑CAGCGCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑c                                                                                                                                                                                                                                             <  2:1906108/238‑1 (MQ=255)
          aaaGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑t                                                                                                                                                                                                                                        >  2:1199712/1‑239 (MQ=255)
           aaGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑tt                                                                                                                                                                                                                                       <  1:1486955/239‑1 (MQ=255)
                ccACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAAt                                                                                                                                                                                                                                   >  1:136868/1‑238 (MQ=255)
                         gCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGga                                                                                                                                                                                                                       <  1:2118114/239‑1 (MQ=255)
                           aaataGCCAAAGCACCACCCCTCAACAATCGA‑CACCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGC‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑Ctt                                                                                                                                                                                                                            <  2:2046265/230‑1 (MQ=255)
                                     aGCACCACTCCTCAACAATCGT‑CAGCTCGCTGACATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACt                                                                                                                                                                                                                  >  1:2046265/1‑232 (MQ=255)
                                      gCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑cc                                                                                                                                                                                                        >  1:1186255/1‑238 (MQ=255)
                                       cccccctcctcAACAATCGC‑CACCGCGCGCCCATCAACTCCCCGCACGCGAAATAACGGCTCAAACTGCTCCGGGAATTCTTTCAGACGTCCGGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTCCTCTGCCGCCCAGCGCGCCACAAAGTCAGCCCCACCCCA‑CACGCCACC‑CACCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑ccgc                                                                                                                                                                                                      <  2:529432/234‑1 (MQ=255)
                                            ctcctcAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AC‑CA‑ccgcctcca                                                                                                                                                                                                 >  1:1591626/1‑235 (MQ=255)
                                                 caacaaTCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATaa                                                                                                                                                                                            >  1:2016130/1‑238 (MQ=255)
                                                  aacaaTCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAACGCGT‑CAT‑CTCTTTCTCTGACGCCAAGCGCGGCACATAGTCAGCACCACCCCA‑CACGGCAAC‑CACCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATaaa                                                                                                                                                                                           >  2:418250/1‑238 (MQ=255)
                                                       tCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAATCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTCCGGAGAACTC‑AA‑CA‑CCGCCGCC‑AATAACCCGTcc                                                                                                                                                                                     >  2:764330/1‑239 (MQ=255)
                                                       tCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGCACTC‑AA‑CA‑CCGCCGTC‑AATAACCCGTcc                                                                                                                                                                                     >  2:2190246/1‑239 (MQ=255)
                                                       tCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTcc                                                                                                                                                                                     >  2:411878/1‑239 (MQ=255)
                                                       tCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTcc                                                                                                                                                                                     >  2:1945245/1‑239 (MQ=255)
                                                             aGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CACCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CC‑CCCCCGTC‑AATAAACCTTCCCGCt                                                                                                                                                                                 >  2:408060/1‑238 (MQ=255)
                                                               cTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGcccc                                                                                                                                                                               >  2:908765/1‑238 (MQ=255)
                                                               cTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTcc                                                                                                                                                                               >  1:1101134/1‑238 (MQ=255)
                                                               cTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTcc                                                                                                                                                                               >  1:831507/1‑238 (MQ=255)
                                                               cTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGCT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTcc                                                                                                                                                                               >  2:613651/1‑238 (MQ=255)
                                                                          cAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAgg                                                                                                                                                                   >  1:183014/1‑239 (MQ=255)
                                                                               tctcGCAAGCCGAATAACGGCTAAAACTGCTCCGGGAATTCGTTCAGACCCTCTGCGTTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCC‑CACGGCACC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGc                                                                                                                                                              <  1:1382242/239‑1 (MQ=255)
                                                                                ctcGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGCACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGc                                                                                                                                                              >  1:871813/1‑238 (MQ=255)
                                                                                ctcGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CATGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCg                                                                                                                                                             >  1:1752695/1‑239 (MQ=255)
                                                                                 tcGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGt                                                                                                                                                            >  2:1691945/1‑239 (MQ=255)
                                                                                     aaGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTc                                                                                                                                                        >  1:890056/1‑239 (MQ=255)
                                                                                     aaGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTc                                                                                                                                                        >  1:216870/1‑239 (MQ=255)
                                                                                     aaGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTc                                                                                                                                                        <  1:411878/239‑1 (MQ=255)
                                                                                       gCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGga                                                                                                                                                                                                                       <  1:1570826/178‑1 (MQ=255)
                                                                                       gCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGga                                                                                                                                                                                                                       >  2:1570826/1‑178 (MQ=255)
                                                                                        ccGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAAAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGAAGGCGTGGGCAgt                                                                                                                                                     >  1:2104849/1‑239 (MQ=255)
                                                                                               aCGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTCTCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCGGCGCGGCACATGGTCAGCCCCCCCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTAt                                                                                                                                              <  1:971691/239‑1 (MQ=255)
                                                                                                 ggCTCAAAATGCTCCGGGAATTCGTTAAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CACCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGATAACTC‑AA‑CA‑CCGCCTTC‑AATAAACCGTCCAGTTCCGCCCCATCACTTATGGCGTGGTGTGTGTTGTActt                                                                                                                                            >  2:1312970/1‑239 (MQ=255)
                                                                                                    tCAAACTGCCCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCAAAAAGCGCGT‑CAT‑CTCTTTCTCTGCCGCCCGGCGCGGCACATAGTCACCCCCCCCCCC‑CCCGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CC‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGt                                                                                                                                         <  1:1380628/239‑1 (MQ=255)
                                                                                                     cAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTc                                                                                                                                        >  1:235307/1‑239 (MQ=255)
                                                                                                      aaatctccccGGGAATCTGTTCCAGCGCCCTTCGGTTTCCGCCCTATGTTGAAAAGCCAGATTCAAAAACCCCCTCCAT‑CCTTTTCTCTGCCCCCCGGCGCGGACAATACTC‑CCCCCCCCCCC‑CCCCGCACC‑CCCCCCCTTTTCCCGT‑TTAAACC‑C‑CTTGCGGAAAACGA‑AA‑CC‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTc                                                                                                                                        <  2:831507/231‑1 (MQ=255)
                                                                                                        aCTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGa                                                                                                                                     >  1:46563/1‑239 (MQ=255)
                                                                                                                  gatatggTTCAGCCGCTCTGCCGTACCGCGCATATGTTAAAAAACCACACTCATAAACCGCTT‑CATACTC‑TTCCCTCGCCCCAAACCCGGCACAAGCACCCCCCCCCCCCC‑CCAGGCCCC‑CCGCCTCTGAT‑CCGG‑TTCAATC‑C‑TCTGGGGAAAAACC‑AA‑CACCCGCCGTC‑AATAACCCTCCCGGTTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTc                                                                                                                             <  2:849565/232‑1 (MQ=255)
                                                                                                                      tCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGT‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAat                                                                                                                                   <  1:1771614/227‑1 (MQ=255)
                                                                                                                      tCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAat                                                                                                                                   >  2:1771614/1‑227 (MQ=255)
                                                                                                                         ttCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCACGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCAtt                                                                                                                     >  1:2026466/1‑238 (MQ=255)
                                                                                                                         ttCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGCATATCGTACAGCCAtt                                                                                                                     >  2:463328/1‑238 (MQ=255)
                                                                                                                           cAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCAAGCACCGCCACATCAAGGATGGCGTGGTCAGGGTTGAATTTGGTCAGAATATAGTCCAGCCATTcac                                                                                                                  >  2:971315/1‑237 (MQ=255)
                                                                                                                                   ctGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACtt                                                                                                          >  2:333576/1‑239 (MQ=255)
                                                                                                                                   ctGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACtt                                                                                                          >  1:1459537/1‑239 (MQ=255)
                                                                                                                                    tGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGc                                                                                                                                                                                                                                                      >  1:1005705/1‑106 (MQ=255)
                                                                                                                                    tGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGc                                                                                                                                                                                                                                                      <  2:1005705/106‑1 (MQ=255)
                                                                                                                                         tATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGCGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCCGAATATCGTCCAGCCATTCCAACTCACTTTCGttt                                                                                                    >  1:1158644/1‑239 (MQ=255)
                                                                                                                                           tCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTa                                                                                                   >  1:1491972/1‑238 (MQ=255)
                                                                                                                                           tCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTa                                                                                                   >  1:380907/1‑238 (MQ=255)
                                                                                                                                           tCGGCCATATGTTGAAAAGCCAGATTCATAAACCGCGT‑CAT‑CTCTTTCTCTGACGCCAAGCGCGACACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑C‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGCC‑AATAAACCGTCCAGCTCCGc                                                                                                                                                                             >  1:667046/1‑164 (MQ=255)
                                                                                                                                            cGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAAc                                                                                                 >  1:1728898/1‑239 (MQ=255)
                                                                                                                                              gCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACgg                                                                                               >  1:1402253/1‑239 (MQ=255)
                                                                                                                                              gCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACgg                                                                                               >  1:1507669/1‑239 (MQ=255)
                                                                                                                                                cATATGTTGAAAAGGCAGATTCATAAAGAGCGT‑CAT‑CTCTTTCTCTGACGCCCAGGGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑GTCAATC‑T‑CTTGCGGAGAACCC‑AA‑CA‑CCGACGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGGGGGCAGTGCTGTATTTGGTCAGAAAATCGTCAAGCCATTCAAAAGCAATTTCGTTTAACggg                                                                                              >  2:1227462/1‑237 (MQ=255)
                                                                                                                                                cATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGt                                                                                              >  1:1482506/1‑238 (MQ=255)
                                                                                                                                                   atGTTGAAACGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCCTGGTCAGTGTTGCATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTGCCg                                                                                          >  2:2222875/1‑239 (MQ=255)
                                                                                                                                                   atGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGAAGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCg                                                                                          >  2:1681687/1‑239 (MQ=255)
                                                                                                                                                         aaaaGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTa                                                                                                                                               >  1:2118225/1‑180 (MQ=255)
                                                                                                                                                         aaaaGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCa                                                                                    >  2:258733/1‑239 (MQ=255)
                                                                                                                                                         aaaaGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCATTTTCa                                                                                    >  2:1906673/1‑239 (MQ=255)
                                                                                                                                                             gCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATAc                                                                                 >  1:269256/1‑238 (MQ=255)
                                                                                                                                                                  aTTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCttt                                                                            >  1:89089/1‑238 (MQ=255)
                                                                                                                                                                       tAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTtg                                                                      >  2:1723287/1‑239 (MQ=255)
                                                                                                                                                                            cgcgT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGa                                                                  >  1:1395320/1‑238 (MQ=255)
                                                                                                                                                                              cgT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGAtc                                                                >  2:1856372/1‑238 (MQ=255)
                                                                                                                                                                                t‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCCCTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGAGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTATCATACGCTTTTCCTTGTGGATCTCa                                                             >  1:745898/1‑239 (MQ=255)
                                                                                                                                                                                         tttCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGcc                                                      >  2:812080/1‑239 (MQ=255)
                                                                                                                                                                                            ctcggccGCCCGGCGCGGCAAATACTCACCCCCCCCCCA‑CCCGGCACC‑CAGCCACTGTT‑CCGG‑TTCAACC‑T‑CTGGCGAAAAACTC‑AC‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGc                                                   <  1:1275669/233‑1 (MQ=255)
                                                                                                                                                                                              ctaccccccgccgcgCCACATATTCCCCCCCCCCCCC‑CCCGCCACC‑CACCCCCTGTT‑CCGT‑TCCAATC‑T‑CTTGCGGAGAACTC‑AC‑CC‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCAc                                                 <  1:634127/228‑1 (MQ=255)
                                                                                                                                                                                              ctGACGCCCAGCGCGGCACATAGCCAGCCCCCCCCCC‑CCCGGCACC‑CACCCATTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAAGCC‑AA‑CC‑CCGCCGTC‑AATAATCCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACGTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCAc                                                 <  1:281108/239‑1 (MQ=255)
                                                                                                                                                                                                 ccccccAGCCCGCCACATATCCACCCCCCCCCCC‑CACGCAACC‑CAGCCACTGTT‑CCGG‑TCAAATC‑C‑CTGGCGGAGACCTC‑AC‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCt                                               <  1:908765/235‑1 (MQ=255)
                                                                                                                                                                                                      cAGCGCCGCACATAATCCACCCCCCCCCC‑CAC‑GCACCACCGCCCCTTGT‑CCCG‑TTCAATC‑C‑CGTGCGGGAAAATC‑AACCC‑CCCCCGTA‑AAAAACCCGCCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCtt                                          <  2:890056/239‑1 (MQ=255)
                                                                                                                                                                                                           cgGCACATAGCCAGCCCCCCCCCC‑CACGCCACC‑CACCCA‑TTTT‑CCGGTTTCACTC‑T‑CTTGGGGAGACCAC‑AA‑CC‑CCGCCGTC‑AATAACCCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGc                                    <  1:613651/239‑1 (MQ=255)
                                                                                                                                                                                                              cacagagacccccccccccca‑CGCGGCACC‑CCCCCTCTGTC‑CCGT‑TTAAACC‑C‑TTCGCGGAGAACTC‑AA‑CC‑CCGCCGTC‑AATAACCCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCg                                  <  1:764330/227‑1 (MQ=255)
                                                                                                                                                                                                              acctatacgccccccaccccacCCCGGCAAC‑CCAGCACTGTC‑CACG‑GTCAATCAT‑CTGCCGAATACCAC‑AC‑CC‑CCCCCGTC‑AAAAACCCGTCCGTTCCCGCCACATCAAGGATGGCGTGGTCAGTTTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGc                                    <  2:2026466/227‑1 (MQ=255)
                                                                                                                                                                                                               ccttAGCCACCCCCCCCCCC‑CCCGCCACC‑CCCCCACT‑TT‑CCGG‑TTCAAAC‑C‑CCTGCGGGAAACCCAAA‑CC‑CCGCCGTC‑AATAACCCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGt                                <  1:425531/236‑1 (MQ=255)
                                                                                                                                                                                                               acaTATCCACCCCCCCCCCC‑CCCGCAACC‑CAGCCCTTGTC‑CCGT‑TACAATC‑T‑TTGGCGAAGAACTC‑AA‑CC‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGt                                <  1:1199712/239‑1 (MQ=255)
                                                                                                                                                                                                               aaaTAGTCTCCCCCACCCCA‑CACGCAAAC‑AACCCTGGTTT‑CCGT‑TTCATTC‑T‑CTTTCGGATAATTA‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCCCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGt                                <  1:1312970/237‑1 (MQ=255)
                                                                                                                                                                                                                ataagccaccccccccccc‑ccCGCCACC‑CCCCCCCTTTT‑CCGG‑TTC‑ATC‑TCCTGGGGGAAACCTC‑AC‑CC‑CCGCCGTC‑AATAAACCGTCCATCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTc                               <  1:1945245/230‑1 (MQ=255)
                                                                                                                                                                                                                   aGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGt                            >  1:665897/1‑239 (MQ=255)
                                                                                                                                                                                                                   aGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGt                            >  1:549061/1‑239 (MQ=255)
                                                                                                                                                                                                                     tcccccccccccca‑CCCGCCCAC‑CTGCCCCTATT‑CCGT‑TTCAATC‑C‑GCGGGGGCGAACCC‑AA‑CA‑CCGGCGTCAAATAACCCTTCCCGGCCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCTTACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGt                            <  2:710679/234‑1 (MQ=255)
                                                                                                                                                                                                                        gCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCag                       >  2:425743/1‑239 (MQ=255)
                                                                                                                                                                                                                        gCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCag                       >  1:2203691/1‑239 (MQ=255)
                                                                                                                                                                                                                        gCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGATGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACa                                       >  1:1761824/1‑223 (MQ=255)
                                                                                                                                                                                                                           caacccca‑cACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTTCCGTTTTAATACGCTTTTCCTTGTGGATCTCAATTCACCAGCACCTATCTTACATGCCGGTCCgactcaacga                    >  2:1287784/3‑230 (MQ=255)
                                                                                                                                                                                                                             acccca‑cACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGTCTCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCCGCGAt                   >  2:1779598/1‑238 (MQ=255)
                                                                                                                                                                                                                              cccca‑cACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCAGAGAt                   >  2:1313334/1‑237 (MQ=255)
                                                                                                                                                                                                                                    cacGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCAGAGATACttttt            >  1:1222058/1‑239 (MQ=255)
                                                                                                                                                                                                                                         cAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCAGAGATACTTTTTGAGTg       >  1:156173/1‑239 (MQ=255)
                                                                                                                                                                                                                                            c‑cAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCAGAGATACTTTTTGAGTGGCt    >  1:446902/1‑239 (MQ=255)
                                                                                                                                                                                                                                               aGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCAGAGATACTTTTTGAGTGGCttt  >  2:320198/1‑239 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                     
GACCAGTCAGAAAGTGCCACGCCCCGCATATAGCCAAAGCACCACTCCTCAACAATCGT‑CAGCTCGCTGCCATCAACTTCTCGCAAGCCGAATAACGGCTCAAACTGCTCCGGGAATTCGTTCAGACGCTCTGCGGTATCGGCCATATGTTGAAAAGCCAGATTCATAAAGCGCGT‑CAT‑CTCTTTCTCTGACGCCCAGCGCGGCACATAGTCAGCCCCACCCCA‑CACGGCAAC‑CAGCCACTGTT‑CCGG‑TTCAATC‑T‑CTTGCGGAGAACTC‑AA‑CA‑CCGCCGTC‑AATAAACCGTCCAGCTCCGCCACATCAAGGATGGCGTGGTCAGTGTTGTATTTGGTCAGAATATCGTCCAGCCATTCCAACTCACTTTCGTTTAACGGTCCCGTTTTCATACGCTTTTCCTTGTGGATCTCAACTCGCCAGCACCTATCTTACATGCCGGTCCGTATCAGAGATACTTTTTGAGTGGCTTT  >  NC_007779/1993365‑1993837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑