Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,362,522 C→A 10.5% Q13K (CAA→AAA)  Y75_RS11800 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077792,362,5220CA10.5% 423.8 / 8.1 155Q13K (CAA→AAA) Y75_RS11800hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (83/50);  new base A (2/16);  total (89/66)
Fisher's exact test for biased strand distribution p-value = 4.95e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 155 total aligned reads displayed.

GGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCATTTTTGCCTGATTTAAACA  >  NC_007779/2362293‑2362758
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                             
ggAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGGATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCCACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATtg                                                                                                                                                                                                                                         >  1:1614146/1‑236 (MQ=255)
   gagaTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGTTATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCCGCGGCTGGAAGG‑GAATAAAATtggcagga                                                                                                                                                                                                                                   >  1:253762/1‑238 (MQ=255)
   gagaTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAAAGGCTGCGGCAGGAAGG‑GCATCAAATtggctggc                                                                                                                                                                                                                                   >  1:936249/1‑239 (MQ=255)
   gagaTTAATGACTATTGCTGAACGGCTACGGCAGAAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGAACGTGAGATTGTGCTGGCGACAAACCAACTCACTGATGCTGATATTCCGAAGTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACCACAAATttactggc                                                                                                                                                                                                                                   >  1:84936/1‑239 (MQ=38)
     gaTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGAAGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACAACAAATTGGGTGGCAg                                                                                                                                                                                                                                 >  1:24351/1‑239 (MQ=255)
      aTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCGTCAAATTGGCTGGCAGGAAGGTAAGGATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGGGAGATTGTGCTGGCGACAACCCCACTCAGTGATGCTGATATTCCGAACTTTCCTTAAAAGGCTAGATTAATGTCTATTGCTGAACGGCTGCGGCAGGAAAG‑ACATGAAATTTTCTGGTAgg                                                                                                                                                                                                                                >  1:1825683/1‑239 (MQ=37)
      aTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCTTGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGGAGGAATG‑AAATCAAAATGGCTGGCAgg                                                                                                                                                                                                                                >  1:1499728/1‑239 (MQ=255)
      aTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAgg                                                                                                                                                                                                                                >  1:654722/1‑239 (MQ=255)
               tATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAAAAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGCGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCCTTAAAAGGAGAGATTCATGACTATTGCTGAACGGCTGGGGCAAGAAAG‑GCATTAAATTTGCTGGGAGGAAGGGAAAt                                                                                                                                                                                                                       >  1:1572387/1‑239 (MQ=38)
               tATTGCTGAACGGCTACGGCAGGAAGAGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGATGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTAACTGATGCTGGTATTCCGAACTGCCCTTAATAGGAGACATTAATGACTATTGCCGAAAGCCTGCGGCAGGAATG‑AAGTCTAATGTGCTggaaggaaaggagat                                                                                                                                                                                                                       >  1:541830/1‑232 (MQ=37)
                 ttGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGACCTGTCATTAAACGGAGAACTTAATGACTATTGCTGAACGGCTGAGGCAGCAAGG‑ACATCAAATTGGATGGCAGGATGGTGAATTa                                                                                                                                                                                                                     >  1:1030902/1‑239 (MQ=39)
                 ttGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTa                                                                                                                                                                                                                     >  1:1572364/1‑239 (MQ=255)
                 ttGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGGGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTGCGAAATGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACAGCTGCGCAAGGAAAG‑ACATCAAAATTGCTGGAAGGAAGCTAAATTa                                                                                                                                                                                                                     >  1:1061129/1‑239 (MQ=39)
                   gCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTTTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAg                                                                                                                                                                                                                    <  1:1610870/238‑1 (MQ=255)
                         cGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAAGTAAATTAGAAGGttt                                                                                                                                                                                                             >  1:967046/1‑239 (MQ=255)
                         cGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACCGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTTGCTGGCCGGAAACAAAATTAGAAGGttt                                                                                                                                                                                                             >  1:1649427/1‑239 (MQ=255)
                              aCGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTGCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAAGCACG‑ACATCAAAATGGCTGGCAGGAACGTAAATTTGAAAGTTTGCATg                                                                                                                                                                                                        >  1:743349/1‑239 (MQ=39)
                                    ggAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGAATGAGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGACTCATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACCTCAAATTGGCTGGGAGGAAGGTATATTAGAAGGTTTGCATGAACAAg                                                                                                                                                                                                  >  1:2059582/1‑239 (MQ=255)
                                     gAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTATCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAAATGGCTGGCAAGAAGGTCAATTAGAAGGGTTGCATGAACaaa                                                                                                                                                                                                  >  1:203413/1‑237 (MQ=255)
                                     gAAGGGCATCAAATTGGCTGGCAGGAAGGGATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAAGTCAATTAGAAGGGTTGCATGAACAAg                                                                                                                                                                                                  >  1:1307064/1‑238 (MQ=255)
                                            aTCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAAG‑ACATCAAAATGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTaaa                                                                                                                                                                                          >  1:1785244/1‑239 (MQ=255)
                                            aTCAAATTGGCTGGCAGGAAGGCATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACGTCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGATTGCATGAACAAACCATTaaa                                                                                                                                                                                          >  1:130610/1‑239 (MQ=255)
                                                     gctggcAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGACCTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCACATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTg                                                                                                                                                                                 >  1:208197/1‑239 (MQ=255)
                                                        ggcAGGAAGGGTTGAATGAACAAGCCATTATAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGTTGAAATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCAGAACGGCTGCGGCAGGAAGG‑ACTTCAAATTGGCTGGCGGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcg                                                                                                                                                                               <  1:792352/238‑1 (MQ=39)
                                                        ggaaGGAAGGTATGAATGAAAAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAGCCCAACTCACTGATGCTGATATTCCGACCTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcg                                                                                                                                                                               <  1:1350591/235‑1 (MQ=255)
                                                                  tactgataaaCGAGCCATGAAAATTGCATTACGCATTCTGGAGCAGGCGTTTAAACGTGGGATTGTGCTGGCAACAACCCAACCAACTGAGGCGGTAACTACGAATGGATATAAAAAGGAGAAATAAAAGAAAAGTGTAAAACGGATGCGGGAGGAACG‑ACATCAAATTGGGTGGCAAGATGGTAAATTGGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGaa                                                                                                                                                                     <  2:936249/230‑1 (MQ=255)
                                                                   tgtgtgaataaaGCCATTAAAATTGCTTTGCGATTGCTAGAGCAGGGTTTTTAACGGGATATTGGGCGGGCAACAACCCAACTCACTGATGCTGATATTCCGAACGGGCATTAAAAGGAGAGATTAAAGGCTATTGCTGAACGGCTGGGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACa                                                                                                                                                                   <  1:1129346/229‑1 (MQ=37)
                                                                           aCAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGa                                                                                                                                                                                                                               <  2:187972/171‑1 (MQ=255)
                                                                           aCAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGa                                                                                                                                                                                                                               >  1:187972/1‑171 (MQ=255)
                                                                           aCAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGaa                                                                                                                                                                     >  1:1901301/1‑229 (MQ=255)
                                                                              aGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATc                                                                                                                                                        >  1:846416/1‑239 (MQ=255)
                                                                               gCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCATTGCGCATGCTGGAACAGTGCTTTGATCg                                                                                                                                                       >  1:1368159/1‑239 (MQ=255)
                                                                                                gcgcATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCATCTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCgg                                                                                                                                      <  1:576312/239‑1 (MQ=255)
                                                                                                    gtGCTGGGGCTGGGATTTGAACGTGGAGTTGCGCGGGAGGAAACCCAATGAACTGATGCTGATATTCCGAAGAGTCATAAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAGGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCAc                                                                                                                                 <  2:1572364/238‑1 (MQ=25)
                                                                                                      gCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCAccc                                                                                                                               >  1:308337/1‑239 (MQ=255)
                                                                                                           aGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTAGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTa                                                                                                                          >  1:201611/1‑239 (MQ=255)
                                                                                                           aGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGGTGGCATGAACAAGCCATTAAAATTCCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCATGTGTCCGCGG‑cccaccgacca                                                                                                                          >  2:1403722/1‑230 (MQ=38)
                                                                                                             cggggCTTTAAACGGGATATTTTTCTGGAGACAACCCGGTGCACTGTAGCAGATATTCGAAATTGTCATAAAGAGGGGAGATGAGTGGATATAGGGGACCAGCGGGGGAAGAAAGG‑ACATAAAATGGGCTGACAGGAGGTAAAATAAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAg                                                                                                                        <  2:2059582/237‑1 (MQ=16)
                                                                                                                ggCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGa                                                                                                                     >  1:872468/1‑239 (MQ=255)
                                                                                                                  cTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑GAATCAAATTGGCTGGCAGGAAGGTAAAGTAGAAGGGTTGCATGAACAAGACATTAAAATTGCTTTGCGCCTGGTGGAACATGGCTTTGATCGTGACCAGGTGCTCGAGG‑CGAACCTGCTAAGAGAAg                                                                                                                   >  2:1257611/1‑239 (MQ=38)
                                                                                                                     tGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATTAAATTGGCTGGCAGGAAGGTAAAATAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTTGAACAGGGCTTTGATCTTGATCAGGTGCAGCCGGACCACCC‑GCTAAGCGAAGCCg                                                                                                                >  2:855284/1‑239 (MQ=38)
                                                                                                                       aaCGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGaa                                                                                                                                                                     <  1:717207/185‑1 (MQ=255)
                                                                                                                       aaCGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGa                                                                                                               >  1:772057/1‑238 (MQ=255)
                                                                                                                            gagaTTGTGCTGGCGACAACCCAACTCTCTGAGGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGATGAACGGCTGGGGCAGGAAGG‑ACATCAAATTGGCTGGAAGGAAGGTAAATGAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCGGATCTgg                                                                                                          <  1:293205/238‑1 (MQ=255)
                                                                                                                            gagaTTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGGGACCAGGTGCCCGCGG‑CCACCCAGCTAAGCGAAGCCGATCCgg                                                                                                          >  2:2198117/1‑238 (MQ=255)
                                                                                                                            gagaTTGTGCTGGCGACAACCCAACTCACGGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTgg                                                                                                          <  1:504138/238‑1 (MQ=255)
                                                                                                                                      tgacGACACCCCAACTCACTGATGTTGATATTCCGAACGGTCATAAAAAGGAGAGATTAATGACTTTTGCTGAACGGCTGCGGCGGGAGGT‑ACATCAAAGTGGATGGCAGGAAGGTAAATTAGAAGTTTGGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAAc                                                                                               <  2:308337/236‑1 (MQ=38)
                                                                                                                                         ccaCAACCCAACTCACTGTTGCTGATTTTCCAAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGACCGGCTGCGGCAGAAAGG‑ACATAAAATGGGCTGGCAGGAAGGTAAATTAAAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCa                                                                                             <  2:872468/236‑1 (MQ=38)
                                                                                                                                         cGACATCCCAACTCACTGATGCTGATATTCCGAACGGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATGGGCTGGCAGGAAGGTAAATAAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCa                                                                                             <  1:1206683/238‑1 (MQ=255)
                                                                                                                                         cGACACCCCAACTCACTGATGCTGATATTCCGACCGGTCATGAAAAGGAGAAATAAATGACTATTGCTAAACGGCTGCGGCAGGAAGG‑ACAGCAAATTGGCTGGGAGGAAGGTAAATTAGAAGGTTTGCAGGAAGAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCa                                                                                             <  1:1924364/238‑1 (MQ=38)
                                                                                                                                         cGACACCCCAACGCACTGATGCTGATATTCCGAACGGTCATAAAAAGGAAAGATAAAGGACTATTGCAGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCa                                                                                             <  1:948623/238‑1 (MQ=38)
                                                                                                                                         agACAACCCAATTCCATGGTTCTGTTATCACGAACCTTCAGTAAAAGGAGAAATTAATGACTATTGTTGATAGGATGGGGCAGGAAGG‑AAATAAAATGGGCTGGCAGGAGGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCa                                                                                             <  2:1785244/237‑1 (MQ=37)
                                                                                                                                          gaccgccaaaCTCACGTGTGCTGATATTCCGAACTGTCATTAAAAGGAGAAATTAATGACTCTGGCTGAACGGCGGCGGCAGGAAGG‑ACATCAAATTGGCGGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCa                                                                                             <  2:1150906/229‑1 (MQ=38)
                                                                                                                                               cccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTa                                                                                      >  1:1243455/1‑239 (MQ=255)
                                                                                                                                                ccAACTCACTGATGCTTATATTCCGAACTGAAATAAAAAGGAGAGATTAATGATTATTGTTGAAAGGCTGCGG‑AGGAAGGAACATCAAATTGGTTGCAGGGAAGGTAAATTAGAGGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAAc                                                                                                                                                                    <  2:1721044/161‑1 (MQ=25)
                                                                                                                                                          gATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGccc                                                                            >  1:2206388/1‑238 (MQ=255)
                                                                                                                                                          gATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGGTTGCATAAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGa                                                                                                                                                          >  1:1721044/1‑161 (MQ=255)
                                                                                                                                                              taaattgtCCGACCTGTCATTAAAAGGATAGATTAGGGCCTATTGCTGATCGGTTGCAGCAGTAGGG‑ACATAAAATTGGCTGTCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTGTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGc                                                                       <  1:1148752/232‑1 (MQ=38)
                                                                                                                                                                 atatTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGa                                                                    >  1:1526741/1‑239 (MQ=255)
                                                                                                                                                                 atatTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGa                                                                    >  1:177685/1‑239 (MQ=255)
                                                                                                                                                                  tgagccGAACTGCAAAAAAAAGGAGAGATAAATGACTATTGTAGAACGGCTGGGGAAGGAAGG‑ACATCAAATTGGCGGGCAGAAAGGTAAATTGGAGGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGAt                                                                   <  1:236548/235‑1 (MQ=38)
                                                                                                                                                                  tatTCCGACCTGTAATTAAAAGGGGAGATTAATGCTTATTGCGAAACGGCTGGGGAAGGAAGG‑AAATCAATTTGGCTGGAAGGAAGGTAAATGAGAAGGTTTGCAGGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGAt                                                                   <  2:772057/239‑1 (MQ=38)
                                                                                                                                                                  tatTCCGAAGTGTCATTAAAAGGAGAGATTAAGGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGAt                                                                   <  1:1554276/239‑1 (MQ=255)
                                                                                                                                                                  tatTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCATGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGa                                                                    <  1:1190861/238‑1 (MQ=255)
                                                                                                                                                                     tCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGA‑ACATCAAATTGGCTGGCAGGAAGGTAAAATAGAAGGTTTGGATGAACAAACCATTAAAATTGCTTTGCGGATGCTGGAACAGGGCTTTGACCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGGGAAGCCGATCTGGCAGCGAATAACCACAAATTAACCCAGGCCCACAGCCgcacc                                                                 >  2:352570/1‑234 (MQ=38)
                                                                                                                                                                      ccGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATcccc                                                               >  1:476155/1‑239 (MQ=255)
                                                                                                                                                                          acggTCATTAAAAGGAGAGATTAATGCCTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATg                                                            <  1:1565519/235‑1 (MQ=255)
                                                                                                                                                                           cTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAg                                                                                                                                                                  <  1:1558998/136‑1 (MQ=255)
                                                                                                                                                                              tCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcg                                                                                                                                                                               >  1:825366/1‑120 (MQ=255)
                                                                                                                                                                              tCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCt                                                       >  1:1741136/1‑239 (MQ=255)
                                                                                                                                                                                aTTAAAAGGAGAGATAAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATAAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCttt                                                     <  1:754280/239‑1 (MQ=255)
                                                                                                                                                                                     aaGGAGAGATAAATGACTATTGCTAAAGGGATGGGGAAGGAAGA‑ACATAAAATTGGCTGCCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGatat                                                <  1:1071528/239‑1 (MQ=39)
                                                                                                                                                                                        gagagaTTAATGACCATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGTTGGAACAGGGCTTTTATCGCGACCAGGTGCTCGCGG‑CCACCCAGATAAGCGAAGCCGAACTGGCAGCGAATAACCACTAAATAACACAGGCCCACAGCCGATCCCCAATGGCCTTTGATATCaa                                             >  2:670838/1‑239 (MQ=38)
                                                                                                                                                                                          gagaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAAAAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATa                                           >  1:1012762/1‑239 (MQ=255)
                                                                                                                                                                                            gaTTAATGACTATGGCTGAACGCGTGGGGAAGAAAGT‑AAATCAAATGGGCTGGCAGGAAGGTAAATTAAAAGGTTGGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATa                                           <  2:476155/237‑1 (MQ=255)
                                                                                                                                                                                             aTTAATGACTATTGCTGAACGGCGGCGGGAGGAAGG‑ACATAAAATTGGCGGGGAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCa                                                                                             <  2:1097723/186‑1 (MQ=255)
                                                                                                                                                                                              ttAATGACTATTGCTGACCGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTGGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAAc                                         <  1:253420/237‑1 (MQ=255)
                                                                                                                                                                                              ttAATGACTATTGCTGAACGGCTGGGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTa                                       <  1:1665313/239‑1 (MQ=255)
                                                                                                                                                                                              taaaTGACTATTGGGAAACGGCTGGGGCAGGAAGG‑AAATAAAGTTGGCTGGAAGGAAGGTAAATTAGAAGTTTTACATGACAAAGCCATTAAAATTGCTTTGCGCATGCTGGAACGGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGTTCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAAc                                         <  2:1243455/235‑1 (MQ=255)
                                                                                                                                                                                              taaaTGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAAc                                         <  1:1245879/235‑1 (MQ=255)
                                                                                                                                                                                                  tGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATTAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTTCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACCGGCCCACAGCCGATCCCCATGGGCCCTTGATTACAATAACTACCtt                                   >  2:525789/1‑239 (MQ=255)
                                                                                                                                                                                                  tGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTTGCTGGCAGGAAGGTAAATTAGAAGGGTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCCGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCtt                                   >  2:1657915/1‑239 (MQ=255)
                                                                                                                                                                                                  tGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAATGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGAGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGCCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAAATACCtt                                   >  1:2059471/1‑239 (MQ=255)
                                                                                                                                                                                                       aTTGCTGAACGGCTGCGGCAGGAATG‑ACATCAAATTGTCTGGCTGGGAGGCAAATTAGGAGGGTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCCTGACCAGGTGCTCGCGG‑CCCCCCAGCTAAGCGAAGCCGCTCTGGCCGCGAATAAACACTAATTAACACAGGCCCACAGCCGATCCCCACTGGCCATTGATATCACTAACTAACTTTTac                               >  2:722090/1‑237 (MQ=255)
                                                                                                                                                                                                        ttGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCACGGGCCTTTGATATCAATAACTACCTTTTATgg                             >  2:645377/1‑238 (MQ=255)
                                                                                                                                                                                                        ttGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTACGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGc                             >  1:1255433/1‑239 (MQ=255)
                                                                                                                                                                                                        ttGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGAAGGAAGGTAAATTAGAAGGTTTGCTTGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCt                                                                                                                                           <  2:1559258/130‑1 (MQ=255)
                                                                                                                                                                                                           cTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAAt                                                                                                  >  1:1684382/1‑167 (MQ=255)
                                                                                                                                                                                                           cTGAACGGCTGCGGAAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAAt                                                                                                  <  2:1684382/167‑1 (MQ=255)
                                                                                                                                                                                                              aaCGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAggg                                                                                                                                                                                                                           >  2:2044807/1‑43 (MQ=255)
                                                                                                                                                                                                                cGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGATAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGAACTGGCAGCGAATCACCACTAATTAACACAGGCCCACAg                                                                        >  1:908333/1‑188 (MQ=255)
                                                                                                                                                                                                                   cTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTcgc                                                                                                                                        >  2:240836/1‑122 (MQ=255)
                                                                                                                                                                                                                   cTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCAttt                  >  1:335883/1‑239 (MQ=255)
                                                                                                                                                                                                                   cTGCGGCAGGAAGG‑ACATAAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTcgc                                                                                                                                        <  1:240836/122‑1 (MQ=255)
                                                                                                                                                                                                                     gCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGGGGCCCAttttt                >  1:576622/1‑239 (MQ=255)
                                                                                                                                                                                                                        ggaggaggg‑aCAGAAAATTGGTGAGCAGTAGGGAAGATTGGAAGGTTGGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCATTTTTGc              <  2:267095/236‑1 (MQ=38)
                                                                                                                                                                                                                        acaagaagg‑aCATAAATTTGGATGGCAGGATGGTAAATAAGAAGGTGTACATGACAAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTTATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCATTTTTGc              <  2:1209320/234‑1 (MQ=255)
                                                                                                                                                                                                                         cAGGAACG‑ACATCAAAGTGGTTGGCAGGAGGGTAAATAAGAAGTTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCATTTTTGcc             <  1:989177/238‑1 (MQ=255)
                                                                                                                                                                                                                         aaggaaga‑aCATAAAATTGGCTGGCAGAAAGGTAAGGAAGAAGGTTTGCAGGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTTCCTTTTATGCGTGGCCCATTTTTGcc             <  1:864965/237‑1 (MQ=39)
                                                                                                                                                                                                                          aggaagg‑aCATAAAATTGGTTGGCAGGAAGGAAAATTAAAAGGTTTGCGGGAAAAAGCCATTAAAATTGCGTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAGGCCGATCTGGCAGCGAATAACCGCTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCATTTTTGCCt            <  1:376748/238‑1 (MQ=255)
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                             
GGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGG‑ACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGG‑CCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCATTTTTGCCTGATTTAAACA  >  NC_007779/2362293‑2362758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑