| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 2,869,758 | A→T | 8.6% | I68N (ATT→AAT) | truD ← | tRNA pseudouridine(13) synthase TruD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 2,869,758 | 0 | A | T | 8.6% | 372.8 / 2.4 | 123 | I68N (ATT→AAT) | truD | tRNA pseudouridine(13) synthase TruD |
| Reads supporting (aligned to +/- strand): ref base A (85/23); new base T (3/9); total (91/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.16e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 125 total aligned reads displayed.
ACGTTGTTCAACGTCATCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCA > NC_007779/2869520‑2869993 | aCGTTGTTCAACGTCATCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGaa > 1:1060257/1‑239 (MQ=255) tgttCAACGTCATGGCGCATGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTACTTGCACGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAGtttt > 2:2118782/1‑239 (MQ=255) gttCAACGTCATCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTc > 1:1408736/1‑239 (MQ=255) ttCAACGTCATCGCGATTGCTCACTTCGCGCAGAATCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCa > 2:564126/1‑239 (MQ=255) aCGTCATCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGCAGCTGACTTCACGGGCA‑TGAATTTTCAGGaa > 1:1076971/1‑239 (MQ=255) cttCATCTCGATTGCTCACTTCGCGCACAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCTGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCGCGGGCA‑TGAATTTTCAGGAA‑t < 2:119389/237‑1 (MQ=255) cGTCATCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑t > 1:796527/1‑239 (MQ=255) cGTCATCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑t > 1:1827903/1‑239 (MQ=255) tCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑Cg > 1:1992961/1‑238 (MQ=255) aTTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGc > 2:1752003/1‑234 (MQ=255) aTTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGc < 1:1752003/234‑1 (MQ=255) ttGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGc > 2:1140880/1‑239 (MQ=255) aaGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGcc > 1:314514/1‑239 (MQ=255) aaGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGcc > 2:658382/1‑239 (MQ=255) ttACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGttttt > 2:1392773/1‑239 (MQ=255) ttACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGttttt > 1:68437/1‑239 (MQ=255) ttACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGttttt > 1:201625/1‑239 (MQ=255) aCCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGATTTTTCAGGAA‑TTT‑CGCTAGTGCATCCGCCACAAAACGGGCATTGCAGCCGTTTTTGa > 2:1174752/1‑239 (MQ=255) aCCTTTCAGCGCGCCTAAACGCAGATTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGATTTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGa > 2:1695042/1‑239 (MQ=255) tCAGCGCGCCTAAACGCAGCTTGCGCTTGTCCCGCGCATCCCCCAGCCCCTGGCAGCCTTCCAGTGGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGAATACCCACTGTTCCGTAAAAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGAtt < 1:2030444/239‑1 (MQ=255) tCAGCCCGCCTAAACGCATCTTGCGCTTGGCCCCCGCATCCTCCAGCACCTGGCCGCCGTGCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCAGGGGACCGCATACCCACTGTTCCGTAAGAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TAAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGAtt < 1:179271/239‑1 (MQ=255) aGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGAATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCt > 1:248770/1‑239 (MQ=255) cgcgcCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTa > 1:360332/1‑238 (MQ=255) cgcCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAAcc > 1:1147440/1‑239 (MQ=255) ccTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGATTTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCGGTTTTTGAGTATTCTAACCAg > 2:2004302/1‑239 (MQ=255) taaaaCGTGGCTGGCGCGTGGGCCGCGCATACCCGATCCCCTGGCACCCTTCATGTTGAAGGGCGCTCAGTTCGGGCCTTTCCTGGCCCGGCGCGCGACACAATAACCTCTGTTCCGTAACAGCGTGTTTGTTTTTTTCCCCGGCGCAGCTCCCTTCACGGGCA‑TTATTTTTCAGGAT‑TTG‑CCCTAGTTCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGa < 2:1886496/237‑1 (MQ=255) aGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTc > 1:1743297/1‑239 (MQ=255) aGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTc > 1:1689583/1‑239 (MQ=255) aGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCAACAAAACGGGTATTGAAGCCGTTTTTGAGGATCCTAACAAGAATATGCTc > 1:54669/1‑239 (MQ=255) cTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGCTCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCa > 1:2073289/1‑238 (MQ=255) cTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCa > 2:219180/1‑238 (MQ=255) cTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCa > 1:1506857/1‑238 (MQ=255) cTTGCGCTTGTGCCGCGCATACTCCAGCACCTGCCAGCCTTCCAGTTGAACGGCGCTCAGATCGGTCATTTCCTTGCCCGGCCCGCGCGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTAAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAACCGGGAATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCtta > 2:298193/1‑236 (MQ=255) cATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCa > 2:556933/1‑239 (MQ=255) aCTCCAGCACCTGGCAGCATTACAGGTGAAGGAAGCTAAGATCGGGCATTTCCTTGCCCGGCTCGAGAGCGCATAACCACAGTTACGAAAAAGAATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGCA‑TTT‑CGCCAGATCATCCGCCTCACAAAGGGTATTGCAGTCGTGTTTGAGGATTCTAATCAGAACATGCCAACATTCACCAACAGGCGCaaa > 2:2214140/1‑238 (MQ=255) aGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCaa > 1:2075055/1‑239 (MQ=255) cACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATACGCTCACCTTCACCATCAGGCTCAAAGCCCaaa > 2:1187973/1‑238 (MQ=255) cTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGCAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTACTGCAGCCGTTTTTGAGGACTCTAACCAGAATATGCTCACCTTCACCATCAGCCTCAAAGCCCAAATCt > 2:323990/1‑238 (MQ=255) cTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCt > 2:1739978/1‑238 (MQ=255) cTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCt > 1:861251/1‑238 (MQ=255) gtcAGCCTTCCAGTTGAAAGGCGATCAGATGGGACATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCAGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCCGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 2:354434/3‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGcc > 1:1733511/1‑143 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAg > 2:1327452/1‑184 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 2:1965021/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 2:874222/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 1:268146/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 1:331235/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 1:1302779/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 2:2198887/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 1:1417255/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 1:697346/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTc > 2:1508465/1‑238 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCCTc > 2:93513/1‑238 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTAACCTTCACCATCAGGCTCAAAGCCCAAATCTTcc > 2:1764666/1‑239 (MQ=255) ggCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTCCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCAGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCACAAGACTCAAAGCCCAAATCTTcc > 2:13964/1‑239 (MQ=255) gCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTccacc > 1:333752/1‑238 (MQ=255) aGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTcc > 1:1233424/1‑239 (MQ=255) aGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTcc > 1:1329358/1‑239 (MQ=255) cTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCCTGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGAtt > 2:317537/1‑239 (MQ=255) cTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAg > 1:45806/1‑204 (MQ=255) gCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTAACCATCAGGCTCAAAGCCCAAATCTTCCACCACCCCAAAGTCTTCCGGATTGGCTTTcagc > 1:1696820/1‑239 (MQ=255) tttCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTcca > 1:357214/1‑204 (MQ=255) ttcgtggCCCGGCCGGCGCGCCCATATCTCTTGTCCCGTAACAGTTTGTTTTTTTTTTCCCCCGGAGATGCTGCCTTCCGGGGAT‑TGATTTTTAAGGAT‑TTC‑CGCCGGTCCACCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGcc < 2:1689583/233‑1 (MQ=255) ttccttccCCGGCACGCGAGCGAATAACCCCTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCTTCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGcc < 1:1511341/239‑1 (MQ=255) tCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGccc > 1:518186/1‑239 (MQ=255) ttGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGt > 1:1227358/1‑239 (MQ=255) gCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTg > 2:752197/1‑238 (MQ=255) ccgccccgcgACCGCAGAACCCCTGTCCCGTAACAGCTTGTTTGTTTTTTTGCCCACCGAAGCTACCTCCACGGGCA‑TGATTTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGcc < 1:1222938/232‑1 (MQ=255) ccGGCACGCGAGCGCATAACCCCTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTCCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCt < 1:1651044/239‑1 (MQ=255) gCACGCGAGCGCAACACCCTTGTTCCGTAACAGCGTTTTTTTCTTTTTGCCCAGCGAAGCTGATTCAAGGGGCA‑TAAATTTTAAGAAA‑TTT‑CCCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTg < 1:2066968/238‑1 (MQ=255) gcATAACCTCTTTTCCGTAACAGCTTTTTTGTTTTTTTCCCCAGCGAAGCTGACTTCGCGGGAA‑TTATTTTTCAGAAT‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGt < 1:341568/239‑1 (MQ=255) cATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTg > 2:144398/1‑239 (MQ=255) tGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGt > 2:282010/1‑239 (MQ=255) ttCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTga > 1:1502064/1‑239 (MQ=255) cctaaaCAGCTTGTTTGTCTTTGCCCCGACCGACGCTGACTTCACGGCCA‑TGAATTGTCAGAAT‑TTT‑CCCCATCTCAACCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAATTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTgaga < 1:1858543/235‑1 (MQ=255) tAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTa > 1:1440006/1‑239 (MQ=255) tAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGACGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTCCCTTGCGG‑TTACCGTGGAGGTAAGTGCGATTa > 1:1835379/1‑238 (MQ=255) aaCAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGTCA‑TGACTTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACACAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGCTTa > 1:957729/1‑238 (MQ=255) cAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCa > 2:815561/1‑239 (MQ=255) cAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCa > 2:233066/1‑239 (MQ=255) gCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTccac > 1:2126079/1‑161 (MQ=255) gCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCaa > 2:1322533/1‑238 (MQ=255) gCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCaa > 1:195360/1‑238 (MQ=255) ttttttGTTTTTTGGCCCAGCAAGGCGGACTTCCGGGGAA‑TGAATTTTCAGGAA‑TTC‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACt < 1:1266148/236‑1 (MQ=255) ttttttGTCTTTTTGCCCGGCGAGGTTGACTCCTGGGGCA‑TGAATTTTCAGGAT‑TTT‑CGCCGGGGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACt < 1:1473824/236‑1 (MQ=255) atttttGTTTTTTTGCCCAGCGAAGTTGCCTTCACGGGCA‑TG‑ATTTTTAGGAATTTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCaaa < 1:2123069/234‑1 (MQ=255) tGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTc > 1:543838/1‑239 (MQ=255) gTTTGCTTTTTGGCCCAGGGAAGCGGCCTACGCGGGCA‑TGAATTTTCAGTAA‑TTC‑CGCCAGTTCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCa < 1:1178454/239‑1 (MQ=255) ttGTCTTTTTGCCCACGGAAGCTGACTGCAGGGGCT‑TTAATTTTC‑GGAA‑TTTCCGCAAGTGCATCCGCCACAAAACGGGTATTGCAGCAGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCaa < 1:743117/238‑1 (MQ=255) tttCCCCAGCGAAGCTGACTTCCGGGGCA‑TGAATTTTCAGGAT‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTttg < 1:373481/239‑1 (MQ=255) ttggCCCAGCAAAGCTAACTCCACGGACT‑GGAATTTTCAGGAT‑TTT‑CGCCGGTACATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTttg < 1:1261815/236‑1 (MQ=255) gCCCAGCGAAGCTGACTTCCCGGTCA‑TTAATTTACAGGAA‑TTT‑CACCGTTGCTTCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTttgttg < 1:321771/239‑1 (MQ=255) gCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTa > 1:633599/1‑239 (MQ=255) ggAAGATGACTT‑ACGGGGATTGAATTTTGGGAAA‑TGC‑CGCGAGTCCTACCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTa < 2:195360/237‑1 (MQ=255) cGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCAGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTaa > 1:2211524/1‑239 (MQ=255) cTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCCCCACAAAGTCTTCCGGATTGGCTTCCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAga > 1:2228827/1‑238 (MQ=255) ttCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTga > 1:1227273/1‑197 (MQ=255) cggggCA‑TGATTTTTGAGGAT‑TTT‑CCCCAGTCCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCAc < 1:658382/237‑1 (MQ=255) cGGGAA‑TAAATTTTCAGGAT‑TTG‑CGCAATCGATTCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCAcc < 1:168047/239‑1 (MQ=255) taaaTTTTCAGTAA‑TTG‑CGCCGCTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTca < 1:1411152/237‑1 (MQ=255) | ACGTTGTTCAACGTCATCGCGATTGCTCACTTCGCGCAGAACCAGGGTAAAGGCGTTACCTTTCAGCGCGCCTAAACGCAGCTTGCGCTTGTGCCGCGCATACTCCAGCACCTGGCAGCCTTCCAGTTGAAAGGCGCTCAGATCGGGCATTTCCTTGCCCGGCACGCGAGCGCATAACCACTGTTCCGTAACAGCATGTTTGTCTTTTTGCCCAGCGAAGCTGACTTCACGGGCA‑TGAATTTTCAGGAA‑TTT‑CGCCAGTGCATCCGCCACAAAACGGGTATTGCAGCCGTTTTTGAGGATTCTAACCAGAATATGCTCACCTTCACCATCAGGCTCAAAGCCCAAATCTTCCACCACCACAAAGTCTTCCGGATTGGCTTTCAGCAGCCCGGTGCCTTGCGGTTTACCGTGGAGGTAAGTGAGATTATCAAACTCAATCATTTTGTTGCCTTAATGAGTAGCGCCACCGCTTCA > NC_007779/2869520‑2869993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |