BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,775,794	T→G	9.3%	S551R (AGT→AGG)	Y75_RS18725 →	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,775,794	0	T	G	9.3%	547.5 / 2.6	186	S551R (AGT→AGG)	Y75_RS18725	putative transporter
Reads supporting (aligned to +/- strand): ref base T (23/138); new base G (21/2); total (46/140)
Fisher's exact test for biased strand distribution p-value = 1.75e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 186 total aligned reads displayed.

GATCACCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCACTC  >  NC_007779/3775557‑3776027

gcccACCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTa                                                                                                                                                                                                                                                 <  1:27864/236‑1 (MQ=255)

gacaaCCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTa                                                                                                                                                                                                                                                 <  1:2224498/235‑1 (MQ=255)

gATCCCCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTa                                                                                                                                                                                                                                                 <  1:1170708/239‑1 (MQ=255)

    aCCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCgg                                                                                                                                                                                                                                             >  1:719840/1‑239 (MQ=255)

      cgccgTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACCGGCGGG‑GGCCTTCTTGAGTATTgggt                                                                                                                                                                                                                                           >  2:244236/1‑237 (MQ=255)

       gccgTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTa                                                                                                                                                                                                                                          <  1:302728/239‑1 (MQ=255)

           ttCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGG‑GGTCTTTTTGAGGATCGGTTTA‑ct                                                                                                                                                                                                                                      >  1:1238784/1‑238 (MQ=255)

           ttCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGG‑GCTCTTCTTGAGTATTgggttac                                                                                                                                                                                                                                        >  1:1244963/1‑232 (MQ=255)

                           tGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGt                                                                                                                                                                                                                    <  1:2154172/238‑1 (MQ=255)

                             gCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCCCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGTGGCCCTTTTGGGGAGTCGGTTAT‑TT‑CTTTTCC‑gggggggttg                                                                                                                                                                                                                   >  2:1727976/1‑234 (MQ=255)

                               aTTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGGTTA‑CT‑CTTTTTC‑CGGGGGAGGCGc‑c                                                                                                                                                                                                               >  1:1519693/1‑238 (MQ=255)

                                      cgcgGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGt                                                                                                                                                                                                                    <  1:284549/227‑1 (MQ=255)

                                           aTGTTAGCCAAAATGAATTCCCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCACCCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACt                                                                                                                                                                                                   <  1:1002975/238‑1 (MQ=255)

                                           aTGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACt                                                                                                                                                                                                   <  2:1002011/238‑1 (MQ=255)

                                               tAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCAc                                                                                                                                                                                               <  1:271941/238‑1 (MQ=255)

                                                            ttACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑Tgg                                                                                                                                                                                <  1:1672992/239‑1 (MQ=255)

                                                            ttACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑Tgg                                                                                                                                                                                <  2:1526200/239‑1 (MQ=255)

                                                            ttACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑Tgg                                                                                                                                                                                <  1:312148/239‑1 (MQ=255)

                                                                 tGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTTTGGAGGATTGGTTGA‑CT‑CTTTTCC‑GGGTGGGGTCGC‑CGTAAATGGGACTCCACCTGGGATTTGC‑TGGCAttt                                                                                                                                                                           >  1:473851/1‑239 (MQ=255)

                                                                    ccATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGGATCGGGTTA‑CT‑CTTTTCC‑GGGTGGGGGTGC‑CGGAAATGGGACTCCCCCTGGGATTCGC‑TGGGAtt                                                                                                                                                                            >  1:434306/1‑235 (MQ=255)

                                                                    ccATGTGCGGGATGCTGGCAGGCTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTg                                                                                                                                                                        <  1:1604527/239‑1 (MQ=255)

                                                                      aTGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATACTCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGaa                                                                                                                                                                      <  1:1190467/239‑1 (MQ=255)

                                                                      aTGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAGTGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGaa                                                                                                                                                                      <  2:512578/239‑1 (MQ=255)

                                                                      aTGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGaa                                                                                                                                                                      <  2:1418916/239‑1 (MQ=255)

                                                                      aTGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGaa                                                                                                                                                                      <  1:348834/239‑1 (MQ=255)

                                                                            gtgATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCCCCTGGTATTCGC‑TGGCATTTCTGAACATCa                                                                                                                                                                 <  2:1968733/236‑1 (MQ=255)

                                                                            gggATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCa                                                                                                                                                                 <  1:7339/238‑1 (MQ=255)

                                                                             ggATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGGGTATCGGGTAA‑CT‑CTTTTCC‑CGGGGGAGGCGC‑CGTAAATGGGACTCCCCCCGGTATTCGC‑TGGCATTTTTGaaactc                                                                                                                                                                  >  1:1747494/1‑232 (MQ=255)

                                                                               aTGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GGTCTTTTTGGGCATCGGGTTA‑CT‑CTTTTTC‑CGGGGGGGGCGC‑CGCTAACAGGACTCCCCCTGGTAATCGC‑TTGCACTTTTGTACacacctgt                                                                                                                                                             >  2:2136295/1‑232 (MQ=255)

                                                                                tGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGaa                                                                                                                                                            <  1:432974/239‑1 (MQ=255)

                                                                                 gCTGGCAGGTTCCATGACCGATCCTGCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGaat                                                                                                                                                           <  1:1043481/239‑1 (MQ=255)

                                                                                               tGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTcc                                                                                                                                            <  1:635125/239‑1 (MQ=255)

                                                                                                  ccGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGG‑GGCCTTCTGGCGGTTCGGTTGA‑CTCCTTTTCC‑GGGTGG‑GGGGC‑CGCAAAAGGGACCCCTCCTGTGCTTTTC‑TGGCCTTTTTTTACATCACTTAATAAATCAAAAAACTccc                                                                                                                                           >  2:2030486/1‑238 (MQ=255)

                                                                                                    gATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGct                                                                                                                                       <  2:719840/239‑1 (MQ=255)

                                                                                                    gATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGG‑GGTCTTCTGGGGGTTCGGTTAA‑TC‑CTTTTCC‑CGGGGGGGGCGC‑CGTTAATGGTTCTCCACCTGGTGTTCGC‑CTGCGTTTTTTAACATCCCTGGAAAAATC‑AAAAAAAcccccc                                                                                                                                        >  2:971608/1‑236 (MQ=255)

                                                                                                     aTCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTTGAGTAGTGGTTTA‑CTCCTTTTCC‑GGTTGG‑GTCGCACGT‑AATTGTCGTCCACCCGGTGTTTGC‑CTTCATTTTCTATCATCACCGCATAAATT‑AAAAACAccccccc                                                                                                                                       >  2:1787866/1‑235 (MQ=255)

                                                                                                      tcctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGaa                                                                                                                                                                      <  1:697275/207‑1 (MQ=255)

                                                                                                      tcctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGctct                                                                                                                                     <  2:435475/239‑1 (MQ=255)

                                                                                                      tcctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGctct                                                                                                                                     <  1:1198051/239‑1 (MQ=255)

                                                                                                      tcctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGctct                                                                                                                                     <  1:373402/239‑1 (MQ=255)

                                                                                                      tcctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGctct                                                                                                                                     <  1:1664422/239‑1 (MQ=255)

                                                                                                       cctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTCAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGctct                                                                                                                                     <  2:1917136/238‑1 (MQ=255)

                                                                                                        ctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCg                                                                                                                                   <  1:244236/239‑1 (MQ=255)

                                                                                                        ctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCg                                                                                                                                   <  1:879649/239‑1 (MQ=255)

                                                                                                        ctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCg                                                                                                                                   <  1:238654/239‑1 (MQ=255)

                                                                                                        ctccGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTGTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATGC‑AAAAACTCCCCGCTCTCg                                                                                                                                   <  2:1014756/239‑1 (MQ=255)

                                                                                                               gcTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTatat                                                                                                                             <  1:423501/238‑1 (MQ=255)

                                                                                                                cTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCCCTTTTTGGGGATCGGGTTA‑CA‑CTTTTCCTGGGTGG‑GTCGC‑CCGTAATGGGTGTCCACCTGGTTTTTACTTGCCTTTTTTGACCATCA‑TTAATAATTT‑TAAAACCCCCCCCTTTCCCtttctg                                                                                                                            >  2:1893717/1‑233 (MQ=255)

                                                                                                                  ggCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCAGTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACa                                                                                                                         <  1:971608/239‑1 (MQ=255)

                                                                                                                        ttcTAATAATCTTCAGCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTTATGTTCCGGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATAC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAgg                                                                                                                   <  2:514597/237‑1 (MQ=255)

                                                                                                                        tGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAgg                                                                                                                   <  2:1330583/239‑1 (MQ=255)

                                                                                                                        tGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAgg                                                                                                                   <  1:496755/239‑1 (MQ=255)

                                                                                                                          cTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCa                                                                                                                                                                 <  1:1970992/192‑1 (MQ=255)

                                                                                                                               aatCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCg                                                                                                            <  1:365861/239‑1 (MQ=255)

                                                                                                                                 tCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCgca                                                                                                          <  1:1639264/239‑1 (MQ=255)

                                                                                                                                    tCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCgcagca                                                                                                       <  2:181925/239‑1 (MQ=255)

                                                                                                                                         cAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGc                                                                                                  <  2:236322/239‑1 (MQ=255)

                                                                                                                                                 ggTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGTT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGTTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCgtgtg                                                                                             <  1:1100947‑M2/234‑1 (MQ=255)

                                                                                                                                                   tGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATc                                                                                                              <  1:897776/217‑1 (MQ=255)

                                                                                                                                                    gcggcggcgCTCTCTTACGCCACTGTCTCTCCGTTGGTAATGTTCCTGCGCATTATCCCCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCg                                                                                        <  1:2054782/238‑1 (MQ=255)

                                                                                                                                                     cggcggcgCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGGGTATCCGGTGA‑CT‑CTTTTCC‑GGGGGGGGGGGC‑CGTAAATGGTACTCCACCCGGTATTTTC‑TGGCCTTTCTTAACATCACTGAAAAAATT‑AAAAACTCCCCCCCCTCGCTATTTGACAAAGAGGCGATCACCAGCAGTGGCGTGTGGTctcgg                                                                                      >  2:1966111/1‑235 (MQ=255)

                                                                                                                                                                tctTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCCCCTGGTATTCGC‑Tgg                                                                                                                                                                                <  1:803091/139‑1 (MQ=255)

                                                                                                                                                                tctTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCAc                                                                                                                                                                                               <  1:398221/125‑1 (MQ=255)

                                                                                                                                                                     cGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCgt                                                                                                <  2:389409/213‑1 (MQ=255)

                                                                                                                                                                         aCTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCcag                                                                 <  1:1552923/239‑1 (MQ=255)

                                                                                                                                                                          cTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTTGAGGATCGGGTAA‑CT‑CTTTTCC‑GGGGGGGGTCGC‑CGGAAATTGTACTCCACCTGGTATTCGC‑TGGCATTTTTTAACATCACTGAATAATTC‑AAAAAATCCCCGCCCTCGCTATATGACAAACAAGGGATCCCCACCAAGGGCTGGGGTTCCGCCACCTTCA‑tttttccccgccg                                                                 >  2:1584522/1‑228 (MQ=255)

                                                                                                                                                                          cTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGGATCGGTTTA‑CT‑CTTTTCC‑GGGGGGGGGCGC‑CGGAAATGGGACTCCCCCTGGTATTTGC‑TGGCCTTTCTGAACATCACTTAAAAAATT‑AAAAAATCCCCGCTCCTGCCATTTTACAACACAGGGATCCGCAGCAAGGGCCGGGGTTTCCCGCCCTTCA‑TTTTccccccccg                                                                 >  2:288547/1‑231 (MQ=255)

                                                                                                                                                                          cTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGGATCGGTTTA‑AT‑CTTTTCC‑GGGTGGAGTCGC‑CGTTAATGGTACTCCCCCTGGTATTCGC‑TGGCATTTTTGAACATCACTGAATAATTC‑AAAAAATCCCCCCTCTCGCTATATGACAACGAGGGGATCCGCAGCAGTGGCGGGGGTTTCGCTCCCTTCA‑TTTGCCGCGcccg                                                                 >  2:709567/1‑236 (MQ=255)

                                                                                                                                                                          cTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGG‑GGGCCTCTGGAGTATCGGTTAA‑TT‑ACTTTCC‑GGGGGGAGGCGG‑CGGAAATGGCAGTCCACCTGGTATTCTC‑TGGCATTTCTGAACATCACCGAATAATTC‑AAAAACTACCCGCCCTCGCCATATGAAAACCAGGTGATCCGCAGCAGTGGGGTGGGTTTCGCCTCCTTCC‑TTTTccccccccg                                                                 >  2:159950/1‑231 (MQ=255)

                                                                                                                                                                           ggtcgctCCGTTGGGTATGTGTCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTGTCGGTTAA‑CT‑CGTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATTACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTGCCTTCA‑TTTGCCGCGCcagca                                                               <  2:339907/233‑1 (MQ=255)

                                                                                                                                                                             tCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGt                                                                                                                                                                                                             <  1:2086023/98‑1 (MQ=255)

                                                                                                                                                                                aTCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTTTTGAGTGACGGTTAACCC‑CTTTTCC‑GGG‑GGGGGGGC‑CCGAAATGGGATCCCACCTGGGTTTTTC‑TTGCCTTTCTTGACCACACCGAATAAATT‑AAAAAATCCCCCCCCCCGCTATATTACAACAAAGGGATCCGCCGCAAGGCCGTGGTGTCCGCCTCCCTCATTTTGCCGCCCcaccggcct                                                           >  2:1148017/1‑232 (MQ=255)

                                                                                                                                                                                      tGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTa                                                          <  1:443093/233‑1 (MQ=255)

                                                                                                                                                                                       ggTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCGCTTCTGGAGGATCGGTTTA‑AT‑CTTTTTC‑CGGGGGGGGCGC‑CGTAAAAGGGACTCCAACTGGTTTTTGC‑CTGCATTTTTGAACCACACTCAATAAATC‑AAAAAACCCCCCCTCTCGCTATCTTACAACAAGGGGAACTCCCGCAAGGGAGTGTGATCCCCCACCTTCC‑TTTTCCCCGCCTGCAGGCTCTCGGGGa                                                   >  2:907197/1‑239 (MQ=255)

                                                                                                                                                                                             gTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GGTCTTTTGGGGGATCGGGTAA‑AT‑CTTTTCC‑CGGGGGGGTCGC‑CGGAAATGGGATCCCACCTTGTATTTGC‑TGGCCTTTTTGAAAATCACTTAAAAATTT‑AAAAAATTCCCGCTCTCCGTATATGACAACCAGGGGGACCGCAACAGAGGCGTGCGGTCCGCCACCTTCA‑TTTTCCGCGTCCGCCGTCTCTCggggtggc                                                >  2:676686/1‑230 (MQ=255)

                                                                                                                                                                                                ccTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑CGGGGGGGGCGC‑CGTAAAAGGTAATCCCCCTGGTATTCTC‑TTGGCTTTCTTAACATCACTGAATAATTC‑AAAAACTCCCCCCCCCCCCTATATTACAACGAGGGGAACCGCAGCAGTGGCCGGGGTTCCGCCACCTTCA‑TTTTCCGCGCCGGCAGCCCATCGGCGAGGAccgctg                                          >  2:31352/1‑234 (MQ=255)

                                                                                                                                                                                                 cTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGt                                         <  1:1406195/239‑1 (MQ=255)

                                                                                                                                                                                                   gcgcATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTACTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCa                                       <  2:1053385/239‑1 (MQ=255)

                                                                                                                                                                                                    cgcATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTTGAGTATCTGTTAA‑CT‑CTTTTTC‑GGGTGGGGTCGC‑CGTAAAAGGTACTCCCCCTGGGATTTGc                                                                                                                                                                                    >  2:272582/1‑100 (MQ=255)

                                                                                                                                                                                                      cATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTTGGGTATCGGTTTA‑AT‑CTTTTCC‑CGGCGGAGTCGC‑CGCAAAAGGTACCCCACCCGGTATTCGC‑TGGCCTTTTTGAACCTCACTGAATAATTT‑AAAAACCCCCCGCCCTCGCTATATTACAACGAGGGGGACCGCAGCACTGGCGCGGGTTCTGCCTCCCTCA‑TTTTGCGCGCCACCAGGCTATCTGCGGGGACTCGGGTCaagg                                    >  2:741885/1‑236 (MQ=255)

                                                                                                                                                                                                       aTTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCt                                   <  1:1629806/239‑1 (MQ=255)

                                                                                                                                                                                                       aTTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTAGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCt                                   <  1:1893717/239‑1 (MQ=255)

                                                                                                                                                                                                               cccccAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTTCCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAgg                                     <  1:861009/229‑1 (MQ=255)

                                                                                                                                                                                                                      ttACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAACCTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTTCCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGTTTTCATAATTACCGcc                    <  1:2030254/239‑1 (MQ=255)

                                                                                                                                                                                                                           ggCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCa               <  1:93827/239‑1 (MQ=255)

                                                                                                                                                                                                                                  gCTCTTCTGGATTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACACCGAGGTGAGCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCTCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATc          <  1:1964518/238‑1 (MQ=255)

                                                                                                                                                                                                                                    tcttctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGTTGGATTCGC‑CGTAAATGGTACTCCCCCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTCCCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCCCTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCg       <  1:1571365/239‑1 (MQ=255)

                                                                                                                                                                                                                                    tcttctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGATTCGC‑CATAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACGGAATAATTC‑AAAAACGCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTCCCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCTTCAGGCTTTCATAATTACCGCCAATCAAAATCCCg       <  1:951645/239‑1 (MQ=255)

                                                                                                                                                                                                                                    tcttctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCg       <  1:641113/239‑1 (MQ=255)

                                                                                                                                                                                                                                    tcttctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCg       <  1:2138568/239‑1 (MQ=255)

                                                                                                                                                                                                                                     cttctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGACAGCAGTCTATCGGCGAGCACCGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATctt        >  1:1280648/1‑235 (MQ=255)

                                                                                                                                                                                                                                      ttctGGAGTATCGGTTAC‑CT‑TTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCa     <  2:309104/239‑1 (MQ=255)

                                                                                                                                                                                                                                      ttctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGATTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCTGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCCCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCa     <  1:1887841/239‑1 (MQ=255)

                                                                                                                                                                                                                                      ttctGGAGGTTCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGCCAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCa     <  1:2136295/239‑1 (MQ=255)

                                                                                                                                                                                                                                        ctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAGCGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTa                                                                                     <  2:513622/158‑1 (MQ=255)

                                                                                                                                                                                                                                        ctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTa                                                                                     >  1:513622/1‑158 (MQ=255)

                                                                                                                                                                                                                                        ctGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCAct   <  1:1584522/239‑1 (MQ=255)

                                                                                                                                                                                                                                         tGGAGTTTCGGTTAA‑CT‑CTTTTCC‑GGGGGGAGTCGC‑CGTAAATGTTACTCCACCTGCTTTTCGC‑TGGCATTTCTCAAAATCACTGAATAATTC‑AAAACCTCCCCGCTCTCGTTATATGACAACGAGGTGATCCGCAGCTGTGGCGTGTTTTCCGCTACCTTCA‑TTTGCCGCTCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCg       <  2:1267419/234‑1 (MQ=255)

                                                                                                                                                                                                                                         tGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCActc  <  1:1762387/239‑1 (MQ=255)

                                                                                                                                                                                                                                         tGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TGTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCActc  <  1:741885/239‑1 (MQ=255)

GATCACCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGT‑GCTCTTCTGGAGTATCGGTTAA‑CT‑CTTTTCC‑GGGTGGAGTCGC‑CGTAAATGGTACTCCACCTGGTATTCGC‑TGGCATTTCTGAACATCACTGAATAATTC‑AAAAACTCCCCGCTCTCGCTATATGACAACGAGGTGATCCGCAGCAGTGGCGTGTGTTCCGCTACCTTCA‑TTTGCCGCGCCAGCAGTCTATCGGCGAGCACTGGCGTCAGGCTTTCATAATTACCGCCAATCAAAATCCCGCACTC  >  NC_007779/3775557‑3776027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`