Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,777,753 A→C 31.6% A314A (GCA→GCC)  Y75_RS18735 → PTS transporter subunit EIIC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,777,7530AC31.6% 63.1 / 16.5 74A314A (GCA→GCC) Y75_RS18735PTS transporter subunit EIIC
Reads supporting (aligned to +/- strand):  ref base A (20/28);  new base C (21/3);  total (41/33)
Fisher's exact test for biased strand distribution p-value = 2.98e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGCTGA‑TT‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGG  >  NC_007779/3777516‑3777990
                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                        
cTAGGGACGGTTTTGCTTTGGCCCGGCATCGGGTAAAGGCGGCGTTCCGGTGTAGGGGGCGCAGGATCTGAAAGGGTTCG‑GTTTGACCCCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGCTGA‑TT‑C‑CCGCaa                                                                                                                                                                                                                                                         <  2:1815682/239‑1 (MQ=255)
    ggACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTGCTGA‑TT‑C‑CCGCCAccct                                                                                                                                                                                                                                                     >  1:1447431/1‑237 (MQ=255)
     gACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTGTTGG‑TTAC‑CCCCAACC‑tt                                                                                                                                                                                                                                                    >  1:389358/1‑239 (MQ=255)
     gACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGTTGT‑TT‑T‑TCGCCACC‑CT‑a                                                                                                                                                                                                                                                  >  1:44810/1‑239 (MQ=255)
            tATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTTGTGT‑TT‑C‑CCCCAACC‑CT‑A‑A‑ACC‑CCa                                                                                                                                                                                                                                        >  1:1716562/1‑239 (MQ=255)
            tATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TGGGTGA‑CT‑T‑CCGCAGCC‑tccaaagcc                                                                                                                                                                                                                                             >  2:1606761/1‑230 (MQ=255)
             aTCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTGCTGA‑GT‑T‑CCGCAAAC‑TT‑T‑A‑Ccc‑ccca                                                                                                                                                                                                                                       >  1:223635/1‑237 (MQ=255)
                  tGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑GTGTTGA‑TT‑C‑CCCCCAAC‑TA‑A‑A‑Ccc‑cccaagtgg                                                                                                                                                                                                                                  >  1:159748/1‑232 (MQ=255)
                  tGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTTCTGG‑TT‑C‑CCGCCCCC‑CT‑A‑A‑CCC‑GCATGC‑t‑gg                                                                                                                                                                                                                                >  1:540138/1‑239 (MQ=255)
                    gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGT‑TTTCTTA‑TT‑C‑CCGCAACC‑CT‑A‑A‑CCC‑CCACGC‑t‑ggtg                                                                                                                                                                                                                              >  1:1026356/1‑239 (MQ=255)
                    gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTGTTGT‑TT‑C‑CCGCCACC‑CT‑A‑A‑CCC‑CCATGC‑t‑gggg                                                                                                                                                                                                                              >  1:280316/1‑237 (MQ=255)
                    gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTGCTTA‑TT‑T‑CCCCAACC‑CT‑A‑A‑ACG‑CCCTGC‑t‑ggtg                                                                                                                                                                                                                              >  1:422289/1‑239 (MQ=255)
                    gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGTTTG‑TT‑T‑CCGCCACC‑CT‑A‑A‑CCC‑CCCCGC‑t‑gggg                                                                                                                                                                                                                              >  1:1945113/1‑237 (MQ=255)
                    gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑CTTCGTA‑TT‑T‑CCCCCACC‑CT‑A‑A‑CAG‑CCaccccggtg                                                                                                                                                                                                                                >  1:2183122/1‑231 (MQ=255)
                    gTCCGGCAGCTGTGGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGCTGA‑TT‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑t‑ggt                                                                                                                                                                                                                               <  1:1187568/238‑1 (MQ=255)
                         gCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTGCTGG‑TT‑T‑CCCCCACC‑TT‑A‑A‑ACG‑CCCTTC‑T‑GGTGGGGAt                                                                                                                                                                                                                         >  1:165701/1‑239 (MQ=255)
                                        ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACGGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGTTGC‑TT‑C‑CCGCCACC‑TT‑A‑A‑CCC‑CCCTGC‑C‑GGGGGGGGTTACC‑G‑CACCG‑CTggg                                                                                                                                                                                                       >  1:2170315/1‑238 (MQ=255)
                                          cATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTGTGGG‑TT‑T‑CCCCCACC‑CT‑A‑C‑ACC‑CCACTC‑TGGGGGGGATTTACC‑G‑AAccccgggga                                                                                                                                                                                                       >  2:872430/1‑232 (MQ=255)
                                          cATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTTCTTA‑TT‑C‑CCCCAACC‑CT‑T‑A‑CCC‑CCACGC‑T‑GGTGGGGATTACCGG‑AACGC‑CTGGaa                                                                                                                                                                                                      >  1:316163/1‑239 (MQ=255)
                                          cATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGCTGG‑TT‑T‑CCTCCCCC‑CT‑A‑A‑CCG‑CCACGC‑T‑GGGGGGGAGTAGC‑G‑AAACG‑CTGGAAt                                                                                                                                                                                                     >  1:1577780/1‑239 (MQ=255)
                                          cATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGA‑TGGTTGA‑TT‑C‑CCCCCCCC‑CT‑A‑A‑ACG‑CGAAAC‑T‑AGTGGGGATTACA‑G‑GAccccctgaga                                                                                                                                                                                                      >  1:1105351/1‑231 (MQ=255)
                                             tggtgtGTACTGGG‑GCACGAACTGCAAGGGTTTATGTTGGAGCGCCGAGCCGTTAAAATCGTTGTTCG‑CGGAGGGGGGTTTTCCCCTGCACGG‑TAACTAAAAAATCT‑TT‑GGGGC‑GGGGGGCTTTTC‑TTTAGCATTGTTCTTCACTGCCCCCCCGGAAAA‑TC‑GGGTAAAG‑GGGGCGGGC‑TTGCTGA‑TC‑C‑CCGCAACC‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTa                                                                                                                                                                                                  <  2:540138/234‑1 (MQ=255)
                                                      cTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTTTCGA‑TT‑C‑CCGCACCC‑CT‑A‑A‑CCG‑CCCTGC‑T‑GGGGGGGAGTAAC‑G‑AAACG‑CTGGGATTTACCTTCCTGt                                                                                                                                                                                         >  1:42228/1‑239 (MQ=255)
                                                      cTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTTCTGG‑TT‑T‑CCGCAACC‑TT‑A‑A‑CCG‑CCACGC‑T‑GGTGGGGAGTAAC‑G‑AACCG‑CCGGGATTTATCTTCCCGt                                                                                                                                                                                         >  1:425692/1‑239 (MQ=255)
                                                      cTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGGTTA‑TT‑C‑CCCCCACC‑CT‑C‑A‑ACG‑CCATGC‑C‑GGTGGGGATTAAC‑C‑AAACC‑CTGGAATTTAACTTCCttg                                                                                                                                                                                         >  1:1216887/1‑237 (MQ=255)
                                                      cTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑CTGGTGA‑TT‑C‑CCGCCACC‑CT‑A‑A‑CCC‑CCATGC‑T‑GGGGGGGATTACC‑G‑AACCG‑CCGGAATTTTCCTTCCTgg                                                                                                                                                                                         >  1:1540425/1‑238 (MQ=255)
                                                         ggCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTTCTTG‑TT‑T‑CCCCCCCC‑TT‑T‑A‑CCC‑CCACGC‑T‑GGGGGGGGTTACC‑C‑AACCG‑CCGGGAATTTCCTTCCTGtt                                                                                                                                                                                        >  1:702898/1‑237 (MQ=255)
                                                         ggCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGCGTTGC‑GA‑TT‑C‑CCGCCACC‑TT‑A‑A‑ACGCCCATCG‑T‑GGGGGGAATACCC‑G‑AACGC‑TTGGAATTT‑CCTTCCTTTTCa                                                                                                                                                                                      >  1:2164473/1‑239 (MQ=255)
                                                         ggCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTTTTGG‑TT‑C‑CCGCAACC‑TT‑T‑A‑CCG‑CCATTC‑A‑GGGGGGGGATAAC‑G‑GACAG‑CTGGCAGTTATCTTCCTCtttt                                                                                                                                                                                      >  1:1952751/1‑237 (MQ=255)
                                                         ggCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGCTGG‑TT‑CTCCCCACCT‑TT‑A‑A‑CCC‑CCA‑CC‑T‑GGTGGGGATTACC‑G‑CAACC‑CCGGAAATTAc                                                                                                                                                                                                 >  1:1603219/1‑228 (MQ=255)
                                                           cgcAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTTCTGG‑TT‑T‑CCCCAACC‑CT‑T‑A‑CCG‑CCATGG‑C‑GGGGGGGAGTTCC‑G‑GACCGCCGGGACTTTACTTTCTTTTTctt                                                                                                                                                                                     >  1:2082841/1‑237 (MQ=255)
                                                           cgcAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGGTTA‑AT‑C‑CCGCCACC‑TT‑A‑A‑CCG‑CCACGCAT‑GGGGGGATTTCCG‑A‑AACCC‑CTGGAATTAACCTCCCTGtcatt                                                                                                                                                                                     >  1:129567/1‑235 (MQ=255)
                                                                caTCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑GTGGTGA‑TT‑T‑CCGCCACC‑TT‑A‑A‑CCGCCCGACC‑G‑GGTGGGGA‑TACC‑G‑AAACG‑CTGGGCGTTTCCTTCCTCTTCC‑TTTCat                                                                                                                                                                               >  2:1313934/1‑237 (MQ=255)
                                                                caTCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑CTGCTGT‑TT‑C‑CCCCCACC‑CT‑A‑A‑CCG‑CCCTGC‑T‑GGGGGGGATTTAC‑G‑AACCG‑CCGGGATTTTCCTTCCTTTTCA‑tttttc                                                                                                                                                                               >  1:1627163/1‑235 (MQ=255)
                                                                   cTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑CTGCTGA‑TT‑T‑CCGCCACC‑TT‑A‑A‑CCG‑CCCAGC‑T‑GGTGGGGATTTCC‑GAAACCG‑CGGGAATTT‑CCTTCCTGTTTATTTTCACCGt                                                                                                                                                                            >  1:183196/1‑239 (MQ=255)
                                                                         gtgTTCA‑GTGGGGGCGCGGGGCGGTTAAAATGGTTGTCCC‑GGGAGGGGGGTTTTGCCCGGCCGGT‑TAACACAAAATTTT‑TG‑GGGGC‑GGTGGGATTTTC‑TTGGGGGTTGTACTTCCCGCCCGCACGGAAAAC‑TG‑GGGAAAAG‑GTGGGGGTC‑TTGCTGA‑TT‑C‑CCGCACCT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGt                                                                                                                                                                      <  2:1447431/236‑1 (MQ=255)
                                                                                      aGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TGGCTGG‑TT‑T‑CCGCCACC‑CT‑A‑T‑ACG‑CCCTCC‑T‑GGGGGGGGTTAGC‑C‑AACAG‑CTGGGATTTTTATTCCCGTTTC‑TTTTACCGTTTCTGTTTTCTGTacacc                                                                                                                                                          >  2:1500372/1‑237 (MQ=255)
                                                                                                cgttGAATTCTTTG‑TCC‑CGGGAGGGGGTTTTTCCCCTGACGGTTAACT‑AAAAAGTT‑TT‑GGGGCGCGGGGGTTTTTT‑TTTAGCGTTTTTCTTCACTGCCCCACCGAAAAA‑GG‑GGGTAAAG‑GGGGCGGGT‑TTGCTGT‑TC‑C‑CCGAACCT‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTggc                                                                                                                                                <  2:2164473/235‑1 (MQ=255)
                                                                                                ccgttaaaagtttgttCCGCGGAAGGGGTTTTTGCCCTGCAGGG‑TACCTCAAAATTCT‑TG‑GGGCC‑GGGGGGCTTTTT‑TTTGGCGATTTCCTCCCCCGCCGCCCCGGAAAA‑TG‑GGGTAAAG‑GGGGGGGTT‑TTGCTTT‑TC‑C‑CCGAAACT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTggc                                                                                                                                                <  2:422289/228‑1 (MQ=255)
                                                                                                           tttttCC‑CGGAGGGGGGTTTTGCCCTCCACGG‑TAACTAAAAAATTT‑TG‑GGGGC‑GGGGGGCTTTTT‑TTTAGCGATGTCCTTCACTGCCGCACCGAAAAA‑TG‑GGAAAAAG‑GTGGGGGGT‑TTGCTGA‑TT‑C‑CCGCACCC‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTc                                                                                                                                    <  1:344393/236‑1 (MQ=255)
                                                                                                           gttgtCC‑GGGAGGGCGTTTTTCCCCTGCGC‑G‑AAACCTAAAAATTT‑TT‑GGGTG‑CGTGGGGCTTTCTTTTGGTGATTTACTTCTC‑CCCCCCCCGGAAAA‑TT‑GGGGAAAAGGGGGGGGGC‑TTGCTG‑‑TT‑C‑CCCCCACC‑TTAA‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTc                                                                                                                                    <  2:1658941/235‑1 (MQ=255)
                                                                                                             gttCC‑CGGAGGGCGTTTTTGCCACGCGCAT‑TATCACAAAATTCT‑TT‑GGTGC‑GGGGGGTATTTT‑TTTGGTGATTTTCTCCCCTGCC‑CCCCGGAAAA‑CG‑GGGAAAAAGGGGGGGGGC‑TTGCGTT‑TC‑C‑CCGCACCT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGa                                                                                                                                  <  2:425692/239‑1 (MQ=255)
                                                                                                               ttgccgtgaGGGGGTTTTTGCCTGGCCGG‑TAACTTAAAAATTTGGT‑GGTGC‑GGGGGGATTTTT‑TTAAGGTGTTTTCTTCCCCCCCCCACCGAAAAG‑TG‑GGATAAAA‑GTGGGGGGT‑TTGCT‑A‑CT‑C‑CCGGAACC‑TT‑A‑ATCCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGa                                                                                                                                  <  2:2073202/231‑1 (MQ=255)
                                                                                                               tCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGG‑TTTTTGA‑TT‑T‑CCCCACAC‑CT‑A‑A‑ACG‑CCCTGC‑T‑GGTGGGGATTACC‑G‑AACCC‑CCGGGACTTTCCCTCCTCTTCA‑TTTTACCGTTTCTGTTTGTCGTATGCGCCGCGGTGGCGGCCTccactgcgga                                                                                                                                 >  2:1708344/1‑229 (MQ=255)
                                                                                                                 ccgggAGGGCTGTTTTGCCTTGCACGG‑TAACTAAAAATTCT‑TG‑GGTCC‑GGGGGGCATTTT‑TTGAGGGATTTATTCCACTCCCGCACCGAAAAA‑TG‑GGTAAAAA‑GGGGGGGGT‑TTGCTGA‑TT‑C‑CCCCAACT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCg                                                                                                                               <  1:431034/236‑1 (MQ=255)
                                                                                                                       ggtcGGTTTT‑CCCTGCGACG‑TAACATAAAAATTT‑TTGGGTGC‑GGGGGGTTTTTT‑TTGAGGGTTTTCCTCCCCTGCCGCA‑CGGAAAA‑AG‑GGGGAAAA‑GGGGGGGGT‑TTGGTTACTC‑C‑CCGCAACC‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATg                                                                                                                          <  2:134994/235‑1 (MQ=255)
                                                                                                                             ttttGCCCTGCACGG‑TAAACCAAAAATTT‑TT‑GTGGC‑CGTGTGTCTTTC‑TTTTGGGGTTTGTTTCCCCGCCGGCCAGGAAAA‑GT‑GGAGAAAA‑GGTGGGGGT‑TTTGTGT‑TT‑C‑CCCGAACCTTT‑A‑T‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTAtct                                                                                                                     <  2:1585012/238‑1 (MQ=255)
                                                                                                                                          gg‑TACCTCAAAAATTT‑TT‑GGTGC‑CGTGGGCTTTTT‑TTTAGCGTTGTACTTCACTCCCGCCCCGAAAAA‑TC‑GGTTAAAA‑GTGGCGGGT‑TTGCTGT‑TC‑C‑CCGAACCT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAAt                                                                                                                                       <  1:464059/206‑1 (MQ=255)
                                                                                                                                                 tCAAAAATCT‑TT‑GGTGC‑GGGGGTCTTTCT‑TTTAGGGTTTTCTTTCCCTGCC‑CCCCGGAAAATTG‑GGGTAAAG‑GTGGCGGTT‑TTCCTTT‑TT‑C‑CCGCACCT‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACAt                                                                                                <  1:639291/239‑1 (MQ=255)
                                                                                                                                                             gttgggtgggggggTATTTT‑TTTGGCGATTTCCCTCACGCCAGCACGTGAAAG‑GG‑GGGTAAGG‑GGGGGGGTC‑TTGTGGA‑TC‑C‑CCGCACCC‑TA‑G‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAgg                                                                                       <  2:1995064/228‑1 (MQ=255)
                                                                                                                                                                   gcggggggtttttC‑TTTAGCGTTGTCCTTCACCGCC‑CCCCGGAAAA‑ACGGGGTAAAA‑GGGGCGGGC‑TTGCTTA‑TT‑C‑CCGCAACT‑TT‑A‑G‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGa                                                                                  <  1:110014/228‑1 (MQ=255)
                                                                                                                                                                       ggggtttttC‑TTTAGCGTTGTCCTTCACT‑CCCCCCCCGAAAA‑TG‑GGGAAAAATGTGGCGGGT‑TGGCTGT‑TC‑C‑CCGCAACT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGa                                                                              <  1:551831/232‑1 (MQ=255)
                                                                                                                                                                                              ctccccTGCCGCCCCGGAAAT‑TC‑GGGTAAAA‑GTGGCGGTT‑TTTCTTT‑TC‑C‑CCGCATCT‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑ATCCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGa                                                       <  1:1606761/234‑1 (MQ=255)
                                                                                                                                                                                              cTTCCCTGCCGCACGGGAAAC‑TG‑GGTTAAAA‑GTGGGGGTC‑TTGCTTT‑TC‑C‑CCGCATTC‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGa                                                       <  1:1642169/239‑1 (MQ=255)
                                                                                                                                                                                                    tccgggcccGGAAAA‑CG‑GGGTAAGA‑GTGG‑GGGG‑TTGCCGT‑TG‑C‑CCCGACCCTTT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGa                                                 <  1:130514/232‑1 (MQ=255)
                                                                                                                                                                                                               aaaa‑GC‑GGGTAAAT‑GGGGCGTGC‑TTGCTGT‑TT‑C‑CCGCACCT‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAAc                                      <  1:772671/239‑1 (MQ=255)
                                                                                                                                                                                                                      gggttAAAT‑GTGGGGGGT‑TTGTTGT‑TC‑C‑CCCCACCT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcgc                                 <  1:1192700/235‑1 (MQ=255)
                                                                                                                                                                                                                      gggatAAAG‑GGGGGGGGT‑TTCCTGT‑TT‑C‑CCAC‑ACC‑TT‑AGC‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACGTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGTCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGGTGTTCAGAAACCAcgc                                 <  1:579711/235‑1 (MQ=255)
                                                                                                                                                                                                                           aaag‑GTGGCGGTC‑TTGCTGA‑TT‑C‑CCGCAACC‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGata                            <  1:1287246/239‑1 (MQ=255)
                                                                                                                                                                                                                                              cta‑TT‑C‑CCGCCACC‑TTAA‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt            <  1:324536/237‑1 (MQ=255)
                                                                                                                                                                                                                                               ttgttcc‑cccCAACC‑AA‑A‑A‑CCC‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt            <  1:1910532/233‑1 (MQ=255)
                                                                                                                                                                                                                                                tgtt‑C‑CCCCCACCTTT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt            <  1:1881305/236‑1 (MQ=255)
                                                                                                                                                                                                                                                tggtcc‑ccGCAACC‑TG‑T‑C‑CCG‑CCATGC‑T‑GGTGGGATTTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt            <  2:324073/233‑1 (MQ=255)
                                                                                                                                                                                                                                                 attcc‑ccTCAACT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCg          <  1:1898406/235‑1 (MQ=255)
                                                                                                                                                                                                                                                   t‑C‑CCGCACCT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTTCCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCa       <  1:1708344/239‑1 (MQ=255)
                                                                                                                                                                                                                                                   t‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTATC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCa       >  2:554481/1‑239 (MQ=255)
                                                                                                                                                                                                                                                   t‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCCCTGTCGACCGTAATGTATCGCTTTGGGGTGGTGGGCAACATGGGCGGAGGTCTGATTGAATAGGTTTTACCGCAAAACTGGATCCCGCTGTTCAGCAACCACGCGGAAATTCTGCTGACCCAACTCGCCa       >  2:1182015/1‑239 (MQ=255)
                                                                                                                                                                                                                                                   t‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCa       >  2:236900/1‑239 (MQ=255)
                                                                                                                                                                                                                                                   t‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCa       >  2:627969/1‑239 (MQ=255)
                                                                                                                                                                                                                                                   t‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATCTACCTTCCTGTTCA‑TTTCCCCGTTGCTGTTTCCTGAACACGCCGTGCTGGCGGCCTCAATGTCGGTCGCAATGAATCTCTTTCGTGGTGTTAGCAACATGCGCCGAGGTCTGATTTACTCGGTTTTACCCCCAAACTCGATCCCGATGTTCCGACACCACCCCGATAAGATGCTGACCCACATctac        >  2:1824216/1‑235 (MQ=255)
                                                                                                                                                                                                                                                     c‑ccGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCCAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCAt      >  2:346755/1‑239 (MQ=255)
                                                                                                                                                                                                                                                     c‑ccACAACC‑TTCA‑C‑CCT‑CCATGC‑T‑GGTGGGAATGACC‑G‑AACCG‑TTGGAATTTCCCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCa       <  2:1186075/239‑1 (MQ=255)
                                                                                                                                                                                                                                                       cccgaaCC‑TTAA‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑ATCCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCGGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCAt      <  1:818487/235‑1 (MQ=255)
                                                                                                                                                                                                                                                       ccGCTACT‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCAtt     <  1:141102/239‑1 (MQ=255)
                                                                                                                                                                                                                                                          cAACT‑TT‑A‑C‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg  <  1:18147/239‑1 (MQ=255)
                                                                                                                                                                                                                                                          cAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AATCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg  >  2:530418/1‑239 (MQ=255)
                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                        
CTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCA‑GTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCC‑CGGAAGGCGGTTTTGCCCTGCACGG‑TAACTCAAAAATCT‑TT‑GGTGC‑CGTGGGCATTTC‑TTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TC‑GGGTAAAA‑GTGGCGGGC‑TTGCTGA‑TT‑C‑CCGCAACC‑TT‑A‑A‑CCG‑CCATGC‑T‑GGTGGGAATTACC‑G‑AACCG‑CTGGAATTTACCTTCCTGTTCA‑TTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGG  >  NC_007779/3777516‑3777990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑