BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,801,517	C→A	8.9%	L217F (TTG→TTT)	Y75_RS18875 ←	DMT family transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,801,517	0	C	A	8.9%	1340.9 / 18.6	415	L217F (TTG→TTT)	Y75_RS18875	DMT family transporter
Reads supporting (aligned to +/- strand): ref base C (250/121); new base A (3/41); total (253/162)
Fisher's exact test for biased strand distribution p-value = 2.27e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 417 total aligned reads displayed.

GGCGACGGGAATCCATTGAAATCAAAATCACC‑GATGACAGAATCAGCAGC‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCGTGTGTCACCAATAAAAAAGTC  >  NC_007779/3801282‑3801751

   gACGGGAATCCATTGAAATCAAAATCACC‑GATGACAGAATCAGCAGC‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTg                                                                                                                                                                                                                                      <  1:669104/239‑1 (MQ=255)

              aTTGAAATCAAAATCACC‑GATGACAGAATCAGCAGC‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGAc                                                                                                                                                                                                                           <  1:464387/239‑1 (MQ=255)

               ttGAAATCAAAATCACC‑GATGACAGAATCAGCAGC‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCCAATAAAACAACGCCAGAATCAA‑ACTGACGTTAACGACa                                                                                                                                                                                                                          >  2:253982/1‑239 (MQ=255)

               atGAAAACCAAATCACCGGGTGACAGAA‑CCGCAACGGTTCCCAGCCAGTCCGGTAATGTGAACGTGCTCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGAc                                                                                                                                                                                                                           <  2:1105843/238‑1 (MQ=255)

                                         aaTCAGCAGC‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAAACAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATaaa                                                                                                                                                                                                 >  2:171307/1‑239 (MQ=255)

                                             agcagc‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAg                                                                                                                                                                                              >  2:615247/1‑238 (MQ=255)

                                               cagc‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCa                                                                                                                                                                                           >  2:1314270/1‑239 (MQ=255)

                                                    gTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAg                                                                                                                                                                                       >  1:1193327/1‑239 (MQ=255)

                                                     ttCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGa                                                                                                                                                                                      >  2:1632561/1‑239 (MQ=255)

                                                     ttCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGa                                                                                                                                                                                      >  1:1339908/1‑239 (MQ=255)

                                                      tCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACa                                                                                                                                                                                                                          >  2:1870291/1‑202 (MQ=255)

                                                      tCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGaa                                                                                                                                                                                     >  1:521634/1‑239 (MQ=255)

                                                          agccagTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCGACAGAATCAg                                                                                                                                                                                 >  2:421897/1‑239 (MQ=255)

                                                               gttcGGTAATGTGAACGGTATCCCCCACAAAAGCAAAGGGAATGAGGGC‑CTTATTAAAGGTTTCGCACAGATTAAAAATGTGGGTTTTGGGCCCG‑CCAATAAATTGTGCTCCTTTCAGGA‑ACAGACAAATTGTCAGGGACGT‑ACC‑AAGGACCACAAAATAAAAAAACGCCAAAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCg                                                                                                                                                                             <  2:1655654/236‑1 (MQ=255)

                                                                tCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGcc                                                                                                                                                                           >  2:839152/1‑239 (MQ=255)

                                                                 ccGGTAATGTGAACGTGATCCCCAGAAACAGCAAGGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGcc                                                                                                                                                                           <  1:299725/238‑1 (MQ=255)

                                                                  acgaaaTGTGACCTGGCTCCCCAGAAACGAAAAAGAGTGG‑AGCGCGCTACTAAAGGGTTCTGAACAG‑CACAAATTGCGGGTTTTGGGCCCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACAAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATAAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCaa                                                                                                                                                                         <  2:868205/235‑1 (MQ=255)

                                                                   ggTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACAAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAAt                                                                                                                                                                        <  1:357646/239‑1 (MQ=255)

                                                                          tgAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCAt                                                                                                                                                                  >  1:595236/1‑238 (MQ=255)

                                                                          tgAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATa                                                                                                                                                                 >  2:125511/1‑239 (MQ=255)

                                                                             aCGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTc                                                                                                                                                              <  1:1319085/239‑1 (MQ=255)

                                                                             aCGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTc                                                                                                                                                              <  1:615247/239‑1 (MQ=255)

                                                                                          caacagcaaAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCaa                                                                                                                                                                                          <  1:1762863/198‑1 (MQ=255)

                                                                                           aacagcaaAAGGATT‑AGCGCGCTAGTTAAGGGTTCTGCCAAG‑CTCAAAATGCTGGCTTTTGGCCCG‑CCAATTAATTGTGCTCCTTTCAGAT‑ACAGACAAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAAAAAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCgacgac                                                                                                                                                   <  2:293519/236‑1 (MQ=255)

                                                                                             aacaaaaGAGAGT‑AGCGCGCTTCTTAAGGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGAACCG‑CCAATTAATTGCGCTCCTTCAAGTT‑AAAGACCAAATGTCAGGGATGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAACCAA‑ACTGCCGTTAACGAAAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAGCAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTa                                                                                                                                              <  1:816833/235‑1 (MQ=255)

                                                                                                 aaaGAGATT‑AGCGCGCTATTTAATGGTTCTGCACAG‑CTAAAAGTGCGGGTTTTTGGCCCG‑CCAATAAATTGTCCTCCTTCCAGGT‑ACAGACTAAATGTCAGGGACTT‑ACC‑AAGGACCACAAAATAAAAAACCGCCAGAAACAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTa                                                                                                                                              <  2:1906942/235‑1 (MQ=255)

                                                                                                  aaGAGAGT‑AGCGCGTTATTTAAGGTTTCTGCACAG‑CTAAAAATGCTGG‑TTTTGGACCGCCCAATAAATGGTGCTCCTTTCAGGT‑ACAGACTAAATGCCAGGGACGT‑ACC‑AATGACCACAAAAAAAAAAAACGCCAAAATAAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTaa                                                                                                                                             <  2:448300/235‑1 (MQ=255)

                                                                                                     agagT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCa                                                                                                                                      >  1:211635/1‑239 (MQ=255)

                                                                                                         t‑AGCGCGCTACTTAATGTTTCTTCACAG‑CTAAAAATGCTGTCTTTTGGACCG‑CCAAGTAATTGTGCTCCTTTCAGGT‑AAAGACAAAATGTCAGGGACGT‑CCC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAg                                                                                                                                   <  1:2195437/238‑1 (MQ=255)

                                                                                                           aGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCg                                                                                                                                 >  1:1629216/1‑239 (MQ=255)

                                                                                                             cgcgcTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAg                                                                                                                                   >  1:448300/1‑235 (MQ=255)

                                                                                                                  tACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAAtt                                                                                                                          >  1:26702/1‑239 (MQ=255)

                                                                                                                  tACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCAGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAAtt                                                                                                                          >  1:1961478/1‑239 (MQ=255)

                                                                                                                  tACTTAAGGGTTTTGCACAG‑CTCAAAATGCGGGCTTTTGGACCG‑CCAATTAATTGGGCTCCTTTCAGGT‑ACAGACTAAAGGTCAGGGACTT‑ACC‑AATGACCACAAAATAAAAAAACCCAAAAAAAAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCcga                                                                                                                                                       <  2:887910/210‑1 (MQ=255)

                                                                                                                    cTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAAt                                                                                                                                                                        >  2:402777/1‑191 (MQ=255)

                                                                                                                            ttCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CTAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACAGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCACAGCGGGCAATTAGCGTTGAgg                                                                                                                >  2:516611/1‑239 (MQ=255)

                                                                                                                            ttCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGAc                                                                                                                                                                                                                           >  2:1147261/1‑132 (MQ=255)

                                                                                                                            ttCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTaa                                                                                                                                             >  1:887910/1‑210 (MQ=255)

                                                                                                                            ttCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGAACGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAACGGGCAATCAGCGGTGAgg                                                                                                                >  1:1807041/1‑239 (MQ=255)

                                                                                                                              cTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGa                                                                                                              >  1:153861/1‑239 (MQ=255)

                                                                                                                              cTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGa                                                                                                              >  2:1772756/1‑239 (MQ=255)

                                                                                                                               tGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACAAAATAAAAAAACGCCAGAATAAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGAt                                                                                                             <  1:420581/239‑1 (MQ=255)

                                                                                                                                tgaacagtcaaaaaGGGTGTCTTTGGCACCG‑CCAAGAATTTGTGCTCTTTTAAGGT‑AAAGACTAAATGACAGGGACAT‑ACA‑AATGACCACAAAATAAAAAAACGCCAGAAACAA‑ACTGCCGTTAACGAAAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGAt                                                                                                             <  2:1340754/229‑1 (MQ=255)

                                                                                                                                tacaagactaaaaaTGGTGGTTTTGGGCGCG‑CCAATT‑ATTGTGGACCATTTAGGTGAGAGAATAAATGTCAGGAGCGT‑CAC‑AATTACCACCAAATAAAAAAACGCGAAAATAAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGAt                                                                                                             <  2:1732291/229‑1 (MQ=255)

                                                                                                                                 cacaG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAg                                                                                                           >  1:2089612/1‑239 (MQ=255)

                                                                                                                                 cacaG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAAAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAg                                                                                                           <  1:1881399/239‑1 (MQ=255)

                                                                                                                                  acaG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACAAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAgg                                                                                                          <  1:1309194/239‑1 (MQ=255)

                                                                                                                                  acaG‑CTCAAAAATCTGGCTTTTGGACGG‑CCAATTAATTGTGCCACTTTCAGGT‑ACAGGCTAAATGTCAGGCACGT‑ACC‑AATGACCGCCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAgg                                                                                                          <  1:236742/239‑1 (MQ=255)

                                                                                                                                   cagcccaaaaaAGTTGGTTTTAGGACCG‑CCAA‑TAATTTGGCTCCCTTCCAGG‑AAAAACCAAAAGTCCAGGGCGT‑TCCAAATAACCACCAAAAAAAAAAACGCAAGAACCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAGCGTGCCATAGCGGGCAATTAGCGTTGAGGGATAgg                                                                                                          <  2:583765/232‑1 (MQ=255)

                                                                                                                                   acagtacAAAATGTTGGTTATTGGCCCG‑CCAATTAATTGTACTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑ATTGACCACCAAATAAAAAAACGCAAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGAt                                                                                                             <  1:1908993/230‑1 (MQ=255)

                                                                                                                                       cTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAggtggt                                                                                                      >  1:1250627/1‑239 (MQ=255)

                                                                                                                                       cTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAggtggt                                                                                                      >  1:1428406/1‑239 (MQ=255)

                                                                                                                                       cTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAggtggt                                                                                                      >  1:990819/1‑239 (MQ=255)

                                                                                                                                       cTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAggaggt                                                                                                      >  1:1507470/1‑239 (MQ=255)

                                                                                                                                       cTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTCCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCa                                                                                                                                                                   <  1:2037532/178‑1 (MQ=255)

                                                                                                                                            aaTGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGa                                                                                                 >  2:1688154/1‑239 (MQ=255)

                                                                                                                                                 tGGCTTTTGGCCCG‑CCAATTAATTGTGCTCCTTTCAGGT‑AAAGACTAAATGTCAGGGACGT‑ACC‑AATGGCCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATgca                                                                                            <  1:1403169/239‑1 (MQ=255)

                                                                                                                                                      tggtgACCG‑CAATATAATTGTACCCTTTATAGGT‑ACAGACAAAAGGTCAGGGACTT‑CCA‑AATGACCACAAAATAAAAAAGCGCCAAAATAAA‑ACGGCCGTTAACGACAAATTTTGTTCCTTGTCTGGCATAAAAAGGCAACAAAATCAGCCCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATgcagcagc                                                                                       <  2:1584964/235‑1 (MQ=255)

                                                                                                                                                                          gtgCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGcc                                                                     >  2:742243/1‑238 (MQ=255)

                                                                                                                                                                          gtgCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACACCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACAACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGcc                                                                     >  1:1154209/1‑238 (MQ=255)

                                                                                                                                                                           tgCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAggtg                                                                                                        >  1:1453476/1‑202 (MQ=255)

                                                                                                                                                                           tgCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGcccc                                                                   >  2:2038906/1‑239 (MQ=255)

                                                                                                                                                                           tgCTCCTTTCAGGT‑ACAGACTAAATGACAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTACCGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATCGAATGCAGCAGCAAATGCCGAGGCAATGcca                                                                    >  2:1379595/1‑237 (MQ=255)

                                                                                                                                                                             cTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATAAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAg                                                                 >  1:957939/1‑239 (MQ=255)

                                                                                                                                                                             cTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACAAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCaa                                                                         <  1:192398/231‑1 (MQ=255)

                                                                                                                                                                                  ttCAGGT‑CAAGACTAAATGTCAGGGACGT‑TCC‑AATGACCACTAAATAAAAAAACGCCAGAATAAA‑ACTTCCGTTACCGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGAt                                                                                                             <  1:1708774/190‑1 (MQ=255)

                                                                                                                                                                                  ttCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGaaca                                                             >  1:684791/1‑238 (MQ=255)

                                                                                                                                                                                  ttCAGAT‑ACAGACAAAATGCCAGGGACGA‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATAAA‑ACTGCCGTTAACGACAAAGTTGGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGaacaa                                                            <  2:944169/239‑1 (MQ=255)

                                                                                                                                                                                  tgcAGGT‑AAACACAAAATGTCAGGGCCGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAAAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGGCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGaacaa                                                            <  1:499859/237‑1 (MQ=255)

                                                                                                                                                                                  tacAGAT‑AAAGACAAAAAGACAGGAACGT‑ACC‑AAGTCCCACCAAAAAAAAAAACCCCAAAACCAA‑ACTGCCGTTAACGACAAAGTTGGTTCCTGGTCGGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGaacaa                                                            <  1:1074811/237‑1 (MQ=255)

                                                                                                                                                                                           cAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGa                                                                                                                  >  2:375252/1‑177 (MQ=255)

                                                                                                                                                                                           cAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAg                                                                 >  2:1523513/1‑226 (MQ=255)

                                                                                                                                                                                            caagcaaaagccAGGGCCGTCACC‑AATG‑CCAACAAAAAAAAAAAACCCAAAAACAACGCTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCACCAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACTCGGCAg                                                    <  2:1071469/228‑1 (MQ=255)

                                                                                                                                                                                             gACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGga                                                  >  2:148377/1‑239 (MQ=255)

                                                                                                                                                                                              aCTAAATGTCAGGGACGT‑ACC‑AATGACCACCAACTAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCAAACTCCAGCCGACGAATGGTAACGTGCAATAGCGGGCAATTAGCGTTGAGGGCTAGGTGGTATAGAATGCAGACGCAAATGACGAGGAAATGCCCCAGAAGAACGCGGCAGgag                                                 >  2:1202010/1‑239 (MQ=255)

                                                                                                                                                                                              aCTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCCGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGgag                                                 >  2:900584/1‑239 (MQ=255)

                                                                                                                                                                                              aCTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGgag                                                 >  1:1660225/1‑239 (MQ=255)

                                                                                                                                                                                              aCTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGgag                                                 >  2:1242015/1‑239 (MQ=255)

                                                                                                                                                                                               caaaaGGTCAGGGACGT‑ACA‑AATGACCCCCAAATAAAAAAACGCCAGAATAAA‑CCGGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGga                                                  <  1:383782/235‑1 (MQ=255)

                                                                                                                                                                                                 aaaTGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAAAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGgagaga                                              <  1:77389/239‑1 (MQ=255)

                                                                                                                                                                                                  aaTGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAATAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGgagaga                                              >  2:494258/1‑238 (MQ=255)

                                                                                                                                                                                                  aaTGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCgacgac                                                                                                                                                   >  2:683108/1‑137 (MQ=255)

                                                                                                                                                                                                  aaTGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGgagaga                                              >  1:1118161/1‑238 (MQ=255)

                                                                                                                                                                                                   aTGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATc                                            >  2:2148746/1‑239 (MQ=255)

                                                                                                                                                                                                        aGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCaa                                                                         <  1:1484611/205‑1 (MQ=255)

                                                                                                                                                                                                        aGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATaa                                       >  1:1020373/1‑239 (MQ=255)

                                                                                                                                                                                                        aGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATaa                                       >  2:208232/1‑239 (MQ=255)

                                                                                                                                                                                                               t‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAAc                                                                                                                                            <  1:230567/131‑1 (MQ=255)

                                                                                                                                                                                                               t‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAAc                                                                                                                                            >  2:230567/1‑131 (MQ=255)

                                                                                                                                                                                                               t‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTc                                >  1:432979/1‑239 (MQ=255)

                                                                                                                                                                                                               t‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTc                                >  1:738726/1‑239 (MQ=255)

                                                                                                                                                                                                                 aCC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGaacaa                                                            >  2:1855472/1‑210 (MQ=255)

                                                                                                                                                                                                                 aCC‑AATGACCACCAAATAAAAAAACGCCAGAATAAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGaacaa                                                            <  1:1855472/210‑1 (MQ=255)

                                                                                                                                                                                                                           ccccaAATAAAAAAACGCCAAAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCgt                      <  1:1566745/237‑1 (MQ=255)

                                                                                                                                                                                                                           caccaAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCgt                      >  1:1675859/1‑239 (MQ=255)

                                                                                                                                                                                                                             ccaAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCgtgt                    >  1:847592/1‑239 (MQ=255)

                                                                                                                                                                                                                              caAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCgtgtg                   >  1:493034/1‑239 (MQ=255)

                                                                                                                                                                                                                                     aaaaaCGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGGAAGATCGATAATGAGGTCGGATGACCGCGTGTCCCCaa            >  2:2006594/1‑239 (MQ=255)

                                                                                                                                                                                                                                               aaaacAA‑ACTGCCTTTAACGACAAAGTTTGTTCCTTGTCAGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCGTGTGTCACCAATAAAAAAGTc  <  2:2114282/235‑1 (MQ=255)

                                                                                                                                                                                                                                               aaaTCAA‑CCTGCCGTTAACGACAAAGTTTGTTCCTTGCCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCGTGTGTCACCAATAAAAAAGTc  <  1:1143586/238‑1 (MQ=255)

GGCGACGGGAATCCATTGAAATCAAAATCACC‑GATGACAGAATCAGCAGC‑GTTCCCAGCCAGTCCGGTAATGTGAACGTGATCCCCAGCAACAGCAAAGAGAGT‑AGCGCGCTACTTAATGGTTCTGCACAG‑CTCAAAATGCTGGCTTTTGGACCG‑CCAATTAATTGTGCTCCTTTCAGGT‑ACAGACTAAATGTCAGGGACGT‑ACC‑AATGACCACCAAATAAAAAAACGCCAGAATCAA‑ACTGCCGTTAACGACAAAGTTTGTTCCTTGTCTGGCATAAAAAGGCAACAGAATCAGACCGCCAATCAGCATACTCCAGCCGACGACTGGTAACGTGCCATAGCGGGCAATTAGCGTTGAGGGATAGGTGGTATAGAATGCAGCAGCAAATGCCGAGGCAATGCCCCAGAACAACGCGGCAGGAGAGATCGATAATGACGTCGGATTACCGTGTGTCACCAATAAAAAAGTC  >  NC_007779/3801282‑3801751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`