BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,857,496	A→G	28.4%	D248G (GAT→GGT)	gpsA →	NAD(P)H‑dependent glycerol‑3‑phosphate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,857,496	0	A	G	28.4%	194.9 / 29.4	151	D248G (GAT→GGT)	gpsA	NAD(P)H‑dependent glycerol‑3‑phosphate dehydrogenase
Reads supporting (aligned to +/- strand): ref base A (39/52); new base G (33/4); total (75/76)
Fisher's exact test for biased strand distribution p-value = 1.15e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 152 total aligned reads displayed.

TGCTGCACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTT  >  NC_007779/3857262‑3857733

tgctgcACTGCGGCAAACGTTACCGCGTTTACAGCAATCCGGATTGCATTGGCGGGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTg                                                                                                                                                                                                                                                   <  1:1170992/239‑1 (MQ=255)

tgctgcACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑Tc                                                                                                                                                                                                                                                     <  1:53250/237‑1 (MQ=255)

tgctgcACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑Tc                                                                                                                                                                                                                                                     <  1:1576032/237‑1 (MQ=255)

tgctgcACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑Tc                                                                                                                                                                                                                                                     <  1:1480384/237‑1 (MQ=255)

 gctgcACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTCGGGGG‑TCTgg                                                                                                                                                                                                                                                  >  2:1308684/1‑239 (MQ=255)

   tgcCCTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATGGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTg                                                                                                                                                                                                                                                <  2:404408/239‑1 (MQ=255)

   tgcACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTg                                                                                                                                                                                                                                                <  2:1473990/239‑1 (MQ=255)

   tgcACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTg                                                                                                                                                                                                                                                <  2:1659179/239‑1 (MQ=255)

   tgcACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTG‑AAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGGTTGGCGG‑TCTggg                                                                                                                                                                                                                                                 >  1:1612436/1‑236 (MQ=255)

    gcACTGCGGCAAAAGGTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTg                                                                                                                                                                                                                                                <  2:1662007/238‑1 (MQ=255)

      gcTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCGCGCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑t                                                                                                                                                                                                                                             <  2:668679/237‑1 (MQ=255)

      aCTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑t                                                                                                                                                                                                                                             <  1:189592/238‑1 (MQ=255)

      aCTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑t                                                                                                                                                                                                                                             <  2:1886290/238‑1 (MQ=255)

       cTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTa                                                                                                                                                                                                                                           <  1:1708455/239‑1 (MQ=255)

        tGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTAc                                                                                                                                                                                                                                          <  1:141742/239‑1 (MQ=255)

         gCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTTGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTAcc                                                                                                                                                                                                                                         <  1:2222192/239‑1 (MQ=255)

         gCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCCTGGCGG‑Tcgtgggcttcc                                                                                                                                                                                                                                           >  1:1781743/1‑228 (MQ=255)

          cGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTTGGGC‑TTAcc                                                                                                                                                                                                                                         >  1:602237/1‑238 (MQ=255)

           ggctataggttCCGCGTTTACAGCCATCCGGAGTTCAGTGGCGTGCAGCGTGGCGGCGCGGTTAAATACGGTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTGGTGGTGCGAATGCGCGGACGGCGCTGATCGCCCGTGGGCTGGCTGAAATGGCGCGTCTTGGTGCGGCTCCGGGTGGCGGCCCTGCCTCCTGCAA‑GGGCATGGCGGGTCTTGGCGA‑TCTGGTGC‑TGACCt                                                                                                                                                                                                                                        <  2:476424/229‑1 (MQ=255)

           ggCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGGTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGTTGCGGGGGTGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCt                                                                                                                                                                                                                                        <  1:837327/238‑1 (MQ=255)

           ggCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTg                                                                                                                                                                                                                                       <  1:1791975/239‑1 (MQ=255)

                     tCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGGTTGGCGG‑TCTGGTGC‑TTACCttgtccgaaaa                                                                                                                                                                                                                              >  1:1924601/1‑228 (MQ=255)

                     tCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCGTGGCGA‑GCTGGTGC‑TTACCCGTAA‑Cggcca                                                                                                                                                                                                                             >  1:969828/1‑234 (MQ=255)

                      ccGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑Acc                                                                                                                                                                                                                          <  1:1308684/239‑1 (MQ=255)

                                    aTCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑Tc                                                                                                                                                                                                                                                     <  2:174884/201‑1 (MQ=255)

                                    aTCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑Tc                                                                                                                                                                                                                                                     >  1:174884/1‑201 (MQ=255)

                                    aTCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑Tc                                                                                                                                                                                                                                                     <  1:540558/201‑1 (MQ=255)

                                    aTCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCGTTGGGA‑TCCGGGGG‑TTAACCGTAC‑CGACC‑ACCAGTcggctacccg                                                                                                                                                                                                             >  2:766501/1‑230 (MQ=255)

                                               aTTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGGTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGGCA‑ACCAGGCGCGCAA‑CCCCCG‑GTTTGGCat                                                                                                                                                                                               >  1:1325195/1‑239 (MQ=255)

                                                   gCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGGGTGGCGG‑GCTGGTGG‑TTACCTGTAC‑CGGCA‑ACCAGTCCGGTAA‑CCGCCG‑TTTTTGCctgat                                                                                                                                                                                            >  1:1003674/1‑238 (MQ=255)

                                                    cGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGG‑TCTGGGGC‑TTACCTGTAC‑CGACA‑ACCAGGCGCGGAA‑CCGCCG‑TTTTGGc                                                                                                                                                                                                 >  1:1574604/1‑232 (MQ=255)

                                                    cGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGG‑GCTGGTGC‑TTACCTGTAC‑CGGCC‑ACCAGCCGCGGAA‑CCGCCG‑TTTTGGCatgatg                                                                                                                                                                                           >  1:929434/1‑238 (MQ=255)

                                                      tGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTTGCGG‑TTTGGCGG‑TTCCCTGTAC‑CGACA‑ACCACTCGCCGAA‑ACGCCG‑GTTTGGCATTAAGCt                                                                                                                                                                                         >  1:1857985/1‑238 (MQ=255)

                                                      tGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCGTTGCGA‑TCTGGTGC‑TTACCTGTGC‑CGACA‑ACCCGTCGCGGAA‑GCGCCG‑TTTTGGGGTGATGcgc                                                                                                                                                                                        >  1:975036/1‑237 (MQ=255)

                                                        cAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCGTGGCGA‑TCTGGGGC‑TTACCTGTAC‑CGGCA‑ACCAGTCGCGGAA‑CCGCCG‑GTTTGGGATGATGCTCgg                                                                                                                                                                                      >  1:1278809/1‑239 (MQ=255)

                                                                     cgGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGGGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTTGCATGATGCTCGGTCAGGGCATGGAt                                                                                                                                                                         >  1:150780/1‑239 (MQ=255)

                                                                                  tATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTGGGGGA‑GCCGGGGC‑TTTCCCTTAC‑CGACC‑AACCGTGCCGGTA‑CCCCCC‑TTTTGGCGCGATGGGCGGGGAGGGCGTGGGTGTGCAAAccgcgc                                                                                                                                                            >  2:1808859/1‑239 (MQ=255)

                                                                                  tATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCCTGGCGG‑TCTTGTGC‑GTTCCACTAC‑CGACA‑ACCACTCGCGGAA‑CCACCG‑TTTTGGGAGAGTGCTCGGGCAGGGCAGGGGAGGAAAAAgcgcc                                                                                                                                                             >  2:157139/1‑237 (MQ=255)

                                                                                          ttGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTTGGGG‑GCTGGGTC‑TTTCCTGGAC‑CGACA‑AACAGGCGCGTAA‑ACGCCG‑GGTTGGGCTGATGCTGGGGCCGGGCGTGGACGTGCTAAACGCGCAGGagaag                                                                                                                                                    >  2:2100974/1‑239 (MQ=255)

                                                                                          ttGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTAc                                                                                                                                                                                                                                          <  1:105656/157‑1 (MQ=255)

                                                                                          ttGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTAc                                                                                                                                                                                                                                          >  2:105656/1‑157 (MQ=255)

                                                                                                       gTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGt                                                                                                                                                                                     >  1:2101268/1‑193 (MQ=255)

                                                                                                                 aTCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCGTGGCGA‑TGTGGGGC‑TTACCCGGAA‑CGAAC‑ACCAGGCGCGTAA‑ACGCCGCTTTTGGC‑TGGTGCTCGGGCAGGGGCTGGAGGGTCAAAGCACGCAGGGGAAGATTGGTGAGGGGGGGGTAgcgg                                                                                                                              >  2:212411/1‑235 (MQ=255)

                                                                                                                     tttttGGGGGGAGGGCGCGTGCGGGGCTGTTCCCCGGGGGGCTGGCTGAATTGCGGCGGCTGGGTGCGGGGGGGGGGGCCCACCCGCCCCCTTTTGG‑GGGCATGGCGGGGTGGGGCGT‑TTTGGGTT‑TTCCCTGTCC‑CGACA‑ACCAGGCGCGAAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCg                                                                                                                          <  2:1278809/237‑1 (MQ=255)

                                                                                                                          ggTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTGGGCGC‑TCTTGGGC‑TTTCCTGGTC‑CCCCA‑ACCCGTCGCGGAA‑CCCCCG‑TTTTGGCATGATGCTCGTCCAGGGCAAGGCGGTCGAAAGCGCGCAGGGGAAGAATGGGTAGGGGGAGGGAGGCGACCGCaaaa                                                                                                                     >  2:1878918/1‑236 (MQ=255)

                                                                                                                          ggTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTAGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGGGG‑TGTGGTGC‑TTACCCGTACTCGA‑A‑ACCAGTCCGGTAA‑CCGCCG‑GGTTGGGAGGATGTTCGGGCAGGGGCTGGGAGTACAAAACGCGCGGGAGGAGGTTGGGCAGGGGGGGGGCGGCAACCGCCATAc                                                                                                                    >  2:536953/1‑239 (MQ=255)

                                                                                                                                aaTGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGGGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGGAA‑CCGCCG‑TTTTGGGATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGGCAGGTGGGGGAAGGCTACCGCAATACGAaag‑a                                                                                                             >  1:571114/1‑239 (MQ=255)

                                                                                                                                         agggCGCTGATCCCCCGTGGGCTGTGTGAAGTGCGGCGTTTGGGTGCGGCGGTGGGTGCCGACCCTGCCCCCTTTAC‑GGGCATGGCGGGGCTGGGTGG‑TTTGGTGC‑TTCCCTGCCC‑ACACA‑ACCAGGCGGGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCcgcg                                                                                                     <  2:2203385/236‑1 (MQ=255)

                                                                                                                                            ggtctgcccccccGTGGGCGGGCGGTATTGGGGGGTCGGGGGGCGGCGGGGGGTGCGGCCCTTGCCCCTGTGGG‑GGGCGGGGGGGGGTTGGGCGT‑TGTGGTGT‑TTACCGGTCC‑CGCAA‑ACCGGCGGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAAc                                                                                                  <  2:912218/228‑1 (MQ=255)

                                                                                                                                               cTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTTCCTGTAC‑CCACA‑ACCAGTGCCGTAA‑CCCCCG‑TTTTGGGATGATGTTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTTGTGAGGGGGGGGGAGGCTAACGCAAAAAGAAAG‑AAGGCCGCGGAATggg                                                                                              >  2:424273/1‑238 (MQ=255)

                                                                                                                                                            ggctggctGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCCTGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGGCAGGGGGTGGGAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGc                                                                                 >  1:1353095/1‑239 (MQ=255)

                                                                                                                                                                 gctgAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGGGG‑TCTGGTGC‑CTACCCGTTA‑CCACA‑ACCCGGCGCGTTA‑ACGCCG‑GTTTGGCATGATTCTCGGGCAGGGGAAGGGGGTAAAAAACCGCCCGGGGGAGAATGGGCAGGGGGGGGGAGGGTACCCCAAAAAGAAAA‑AAAACCGCGAACTCGCGCGTCGCCTTGGCGGTGa                                                                            >  2:770565/1‑239 (MQ=255)

                                                                                                                                                                           cgcgTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGGGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGGGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGGTGAAATGCCAATa                                                                  >  1:1987547/1‑239 (MQ=255)

                                                                                                                                                                           cgcgTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCCTGGGGG‑TCTGGGGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGTCATGATGGTCCGTCCGGGCCTGGGTGTACAAAGCGCGGCGGAGAAGATTTGTCAGGCGGGGGGAGGCTCCCGCAATACGAAAG‑AAAGCTCCGGACCTGGGCCGCGCCTCGGCCTGGCAATGCCAATa                                                                  >  2:1058441/1‑239 (MQ=255)

                                                                                                                                                                           cgcgTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCCCGGGGA‑TCCTGTGC‑CTTCCTGTAC‑CGACA‑ACCCGGCGCGTCA‑CCGCCG‑GTTTGGCAGTGTGCCCGGGCCGGGCAAGGACGTGCAAAAGCCGCAGGGGAAAATTGGGCGGGGGGGGGAAAGTTACCGCAAAACGGAAGCAAGCCCCCGACCGGGGGC‑TCGCTTTGGGGGTGAAAtcgcaaaa                                                                  >  2:1824449/1‑232 (MQ=255)

                                                                                                                                                                               tCTTGGTGCGGCGCTGGGAGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCGTGGGGA‑AGAGGTGG‑TTAACTCTAT‑CCGCA‑ACCAGCCGCGTAA‑ACCGCG‑GTTTGGCATGAAGCTCGGTCAGGGCATGAGTGACGAAAGAGCGCAAGGGAAGGTTGGGCAGGGGGGGGAAGGCTACAGCCAAACAAAAG‑AAGAACCACAAATGGGGAATCGCTCCGGCGCTGAAAAGTCAAAAAACg                                                              >  2:1361465/1‑239 (MQ=255)

                                                                                                                                                                                  gggTGCGGCGGTGGGGCCCGTCCCCGCCTCTTTTAG‑GGGCATGGGGGGGCTGGGGGA‑TGTGGTGC‑TTACC‑GCAC‑CCAAACACCATGGGGGAAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑g                                                           <  1:842275/237‑1 (MQ=255)

                                                                                                                                                                                         gcgcTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGGTTGGCGG‑TCTCGTGC‑CTACCTGTAA‑CCACA‑ACCAGTCGCGGAA‑CCGCCG‑GTTTGGCATTATGCTCGGGCCGGGGAAGGGTGGACAAAGCCCGCCGGGGAAGAATGGTCAAGTGGGGGGAGGCTAACCCAACACGGAAG‑GAGACCGCGGACCGGCGCATAGGCTCGGCGGTGAAAATGCAAAAACAGA‑AGA‑AAtttt                                                  >  2:855282/1‑238 (MQ=255)

                                                                                                                                                                                           gttGGGTGCGGCCTCGGCCCCTTTTTT‑GGGATTGGGGGGGTTGGGCGATTGTGGT‑C‑TTCCCTGTAC‑CAAAA‑ACCGTGCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:2123265/237‑1 (MQ=255)

                                                                                                                                                                                           ggggggTGCCGACCCTGCCACTTTTAG‑GGGCATGGGGGGGCTTGGGGT‑TGTGGTGC‑TACCCGGTCC‑CGACA‑CCCGGTGGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:424273/236‑1 (MQ=255)

                                                                                                                                                                                           gcgggggGCCGCCCCTGCCGCCTTTAT‑GGGCTTGGGGGGGCTTGGCGC‑TCTGGTGC‑TTCCCTGTCC‑CGACA‑GCGGGTCGGGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:1257160/236‑1 (MQ=255)

                                                                                                                                                                                           gcgggggGCCGACCCTGCCCCCTTTAG‑GGGCATGGCGGGGTGTGGCGA‑TCTGGTGC‑TTACCTGCAC‑CGACA‑ACCGGTGGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:1878918/236‑1 (MQ=255)

                                                                                                                                                                                            ttgggccccGCCCCTCCCCCCTGTAT‑GGGCATGGGGGGTTTGGGCGT‑TTTGGTGC‑TTACTTGTAC‑CGACA‑ACCAGTCGGGTAC‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:198174/231‑1 (MQ=255)

                                                                                                                                                                                            gtGGGTGCCGCCCCTCCCCCGTTTGT‑GGGGATGGGGGGTTTTGGCGT‑TGTGGTGC‑TTCCTTGTAC‑CGACA‑CCGAGCGGGGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:577196/237‑1 (MQ=255)

                                                                                                                                                                                            gggggTGCCGCCCCTCCCACCTTTGT‑GGCGATGGGGGGGCTTGGCGA‑TTTGGGGT‑TTCCCTGTCC‑CGACA‑ACTAGTCGTGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:1374355/236‑1 (MQ=255)

                                                                                                                                                                                            gggggTGCCGACCCGCCCCCTTTTGT‑GGCGAGGGCGGGTCTGGGCTT‑GGTGGTTT‑TTCCCGGTAC‑GGACA‑ACCGGGCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  2:658078/236‑1 (MQ=255)

                                                                                                                                                                                            cggggTGCCGCCCCTGCCACTTTTAG‑GGGCGTGGCGGGGCTGGGCGT‑TTTGGTGC‑TTCCCTGTCC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:1858453/236‑1 (MQ=255)

                                                                                                                                                                                            cTGGGTGCCGCCCCTGCCACTTTTAG‑GGGCAGGGCGGGGTTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:297912/238‑1 (MQ=255)

                                                                                                                                                                                            cTGGGTGCCCCCCCTCCCCCCTTTAT‑GGGCAGGGGGGGGCTTGGCGT‑GTTGGTGC‑TTCCTTGTAC‑CGACA‑CCCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:1225641/238‑1 (MQ=255)

                                                                                                                                                                                             ctggTGCCCCCCCTTGCCCCTTTTTGGGGAATGGGGGGGTTTGGCGA‑TTTGGTGT‑TTACGTGTGC‑GGACA‑ACCAGGCGCGTAG‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:1145026/236‑1 (MQ=255)

                                                                                                                                                                                              ggttgccaccccTGCCCCTTTTAT‑GGCCAGGGGGGGGTTGGGCGG‑TTTGGTGT‑TTCCTTGTAC‑CAACA‑CCCAGTCGCTTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCaa                                              <  1:943396/229‑1 (MQ=255)

                                                                                                                                                                                               ggTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGGCTGGGGG‑TCTGGGGG‑CTACCTGTAC‑CGACC‑ACCAGTCGCGGCA‑CCCCCG‑GTTTGGGCTGATGCTCCGTCCGGGCAAGGATGTACAAAACGCGCAGGAGAAGATTGGGTCGGTGGGGGGCGGCTAACGCAAAACGAAAG‑AAGACCGCGAACAGGCGCCTCGCTTCGGCGGTTAAATGCCAATAACCGAGGGA‑AATTTAACacg                                             >  2:1598454/1‑237 (MQ=255)

                                                                                                                                                                                                 tggagccccTGCCACTTTTTT‑GGGAGTGGGGGGGCGTGCGGA‑GTTGGTGG‑TTACCTGTAC‑AGACA‑ACCGGGCG‑GTAACCCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGta                                           <  2:1737445/232‑1 (MQ=255)

                                                                                                                                                                                                   ccGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGG‑TCTGGTGC‑CTTCCTGTAC‑CCACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCCGGAGAAGATTGGTCAGGTGGGGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGG‑GGA‑AATTTTTCAAGtgtta                                        >  2:860138/1‑239 (MQ=255)

                                                                                                                                                                                                    cGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCCTGGCGG‑GCTGGGGC‑TTTCCTGTGC‑CGTCA‑ACCCGTCGCGTAA‑CCGCCG‑CTTTGGGCTTGTGCCCCGTCCGGGCATGGATGTACAAAGCCCACCGGAGAAGATTGGGCAGGTGGGGGGAGGCGACCGCAAAACGAAAG‑AAGTCCGCGGACAGGCGCATCGCCTCGGCGTTGAAATGACAAGAACCGA‑GGA‑AAATTATCAAGaattat                                       >  2:281045/1‑239 (MQ=255)

                                                                                                                                                                                                         cTGCCACCTTTAT‑GGGCATGGCGGGGCCTGGCGC‑TCTGGTGC‑TTACCTGTAT‑CCACC‑ACCAGTCGCGTAA‑ACGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGGTGGACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGGGACCGCAATACGAAAA‑AAAACAACCAACTGGCGCCTCGCGTCGGGGGTGAAATGCCAAAAAACGG‑GGACAATTTA‑CAAGTATtatacttg                                  >  2:690493/1‑235 (MQ=255)

                                                                                                                                                                                                          tGCCACCTTTGG‑GGGCAGGGGGGGGCTTGGCGA‑TCGGGTGC‑TTACCTGTCC‑CGACA‑ACCAGGCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCa                                                                                                                                                                              <  1:1477547/101‑1 (MQ=255)

                                                                                                                                                                                                          tGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGG‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGGGGAAgg                                                                                                                                >  1:1199365/1‑147 (MQ=255)

                                                                                                                                                                                                           gCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGGACAAAGCGCGCAGGAGAAGATTGGTCAGGGGGGGGAAGGCTACCGCAATACGAAAG‑AAGGCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTTCgg                                >  1:1451837/1‑239 (MQ=255)

                                                                                                                                                                                                                ttttAG‑GGGCGTGGCGGGGCTGGGGGA‑TCTGGTGC‑TTACCTGTCC‑CGAAA‑CCCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATc                                                <  1:350091/217‑1 (MQ=255)

                                                                                                                                                                                                                cTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CCACC‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCCCGGTCCGGGCATGGGTGTACAAAACCCGCCGGGGAAGATTGGTCAGGGGGGGGGAGGCCACCGCAAAACGAAAG‑CAGACCGCGAACAGGCGCATCGCTTCGGCGGTGAAATGCCCAAAAACGA‑GGA‑AAATTATCAAGAATTATATTTCGGaaaaa                           >  2:707216/1‑239 (MQ=255)

                                                                                                                                                                                                                   ttgggggCATGGGGGGGCTTGGCTA‑TCTGGTGC‑TTCCCTGTAC‑CGACA‑ACCGGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAAc                         <  1:264018/235‑1 (MQ=255)

                                                                                                                                                                                                                   ttgggggCAGGGCGGGGTTTGGCGA‑TTTGGTGC‑TTCCCTTTAC‑CGACA‑ACCAGTGGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAgcgcg                                                                                                                                                             <  1:1910871/106‑1 (MQ=255)

                                                                                                                                                                                                                    aT‑GGGCATGGCGGGGCCTGGCGA‑TCTGGGGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGGAA‑ACGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGAATGGTCAGGTGGTGGAAGGCGACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCCCTTCGGCGGTGAAATGCGCACAACCTA‑GGA‑AAGTTATCAAGTATTATATTGCGGTAAAAAcg                        >  2:1400069/1‑238 (MQ=255)

                                                                                                                                                                                                                          gcggggggggGTTGGGGA‑TTTGGGGCTTTCCCTGTAC‑GGAAA‑CCCAGGCGCTTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAAcgcgcg                    <  1:1601315/232‑1 (MQ=255)

                                                                                                                                                                                                                           aTGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGGCA‑ACCAGTCGCGCAA‑CCCCCG‑CTTTGGCATGATGCTCGGTCACGGCATGGGTGTACAAAGCGCGCAGGAGAAGATTGGTCACGTGGGGGAAGGCTACCGCAATACGAaag‑aa                                                                                                            >  1:1310371/1‑150 (MQ=255)

                                                                                                                                                                                                                           aTGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATtata                                      >  1:1587286/1‑218 (MQ=255)

                                                                                                                                                                                                                            tGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGGCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATtata                                      >  1:2048097/1‑217 (MQ=255)

                                                                                                                                                                                                                              ggggggtgtGGTGA‑TCTGGGGA‑TTACTTGTAC‑CGACA‑CCCAGTCGGGAAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAgg               <  1:2090125/230‑1 (MQ=255)

                                                                                                                                                                                                                              gCGGGGTTTGGCGT‑TTTGGTCC‑TTCCCTGTAC‑CGAAA‑CCCATCCACGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAgg               <  1:1706373/238‑1 (MQ=255)

                                                                                                                                                                                                                                   gttgggCGA‑TTGGGTTC‑TTCCCTGTAC‑CGACA‑ACCAGTCGCGTAC‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGgcagca          <  1:384873/234‑1 (MQ=255)

                                                                                                                                                                                                                                     ttGGCGC‑TCTGGTGC‑TTACCTGTAC‑GGAAA‑GCCAGGCGGGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCAtt        <  1:1058441/238‑1 (MQ=255)

                                                                                                                                                                                                                                     tgggCGT‑TGTGGTTC‑TTACCTGTAC‑CGACA‑ACCAGCCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCAtt        <  1:1458060/236‑1 (MQ=255)

                                                                                                                                                                                                                                      tGGGGA‑TCTGGGTC‑ATACCGGTAC‑CGAAA‑GCGAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa      <  1:1008069/239‑1 (MQ=255)

                                                                                                                                                                                                                                      tGGCGT‑TGTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa      <  1:605020/239‑1 (MQ=255)

                                                                                                                                                                                                                                      tGGCGT‑TCTGGTGC‑TTCCCTGTAC‑CGACA‑CCCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa      <  1:711137/239‑1 (MQ=255)

                                                                                                                                                                                                                                      tGGCGA‑TCTGGTGC‑TTACCTGTCC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa      <  1:157139/239‑1 (MQ=255)

                                                                                                                                                                                                                                      gggCGT‑TTTGGTGC‑TTCCCGGGAC‑CAACA‑CCCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa      <  1:341884/238‑1 (MQ=255)

                                                                                                                                                                                                                                      gggCGA‑TCTGGTGC‑TTACCTGTCC‑CGAAA‑CCAAGTGGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa      <  1:1735107/238‑1 (MQ=255)

                                                                                                                                                                                                                                           a‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACttt  >  1:686666/1‑238 (MQ=255)

TGCTGCACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTAT‑GGGCATGGCGGGGCTTGGCGA‑TCTGGTGC‑TTACCTGTAC‑CGACA‑ACCAGTCGCGTAA‑CCGCCG‑TTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAG‑AAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGA‑GGA‑AATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTT  >  NC_007779/3857262‑3857733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`