BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,899,467	T→C	7.3%	E415G (GAA→GGA)	avtA ←	valine‑‑pyruvate transaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,899,467	0	T	C	7.3%	873.5 / 3.3	288	E415G (GAA→GGA)	avtA	valine‑‑pyruvate transaminase
Reads supporting (aligned to +/- strand): ref base T (170/86); new base C (2/26); total (172/116)
Fisher's exact test for biased strand distribution p-value = 7.55e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 292 total aligned reads displayed.

CTGCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAACCATAGCCAGAGGAAAATGGCTCCTTC  >  NC_007779/3899231‑3899705

 tGCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCa                                                                                                                                                                                                                                                 >  2:789877/1‑238 (MQ=255)

 tGCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGAGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CCCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCa                                                                                                                                                                                                                                                 >  1:260731/1‑238 (MQ=255)

 tGCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGGTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACCAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGGAACGCA‑ACAGGCAA‑TTTTTAGTGACTTTCa                                                                                                                                                                                                                                                 >  2:1640389/1‑238 (MQ=255)

   cccGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGATTTTCAGc                                                                                                                                                                                                                                               >  2:1686904/1‑238 (MQ=255)

        cAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAgg                                                                                                                                                                                                                                          <  2:317543/238‑1 (MQ=255)

        cAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAgg                                                                                                                                                                                                                                          <  1:1540909/238‑1 (MQ=255)

        cAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAgg                                                                                                                                                                                                                                          <  1:1270792/238‑1 (MQ=255)

        cAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGc                                                                                                                                                                                                                                         <  1:592038/239‑1 (MQ=255)

        atagggCGTTGCAGTGCATGGATGTCGAGAAATTGCAGCGGCATCGGCTGCGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAgg                                                                                                                                                                                                                                          <  2:1880645/234‑1 (MQ=255)

         aaaGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGc‑t                                                                                                                                                                                                                                       <  1:298843/239‑1 (MQ=255)

                       gCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑tt                                                                                                                                                                                                                        >  1:641272/1‑238 (MQ=255)

                             aTGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCGGCCTGTTTGAAACGTTTTACGGCGTTTCTCAACGCCGGAAAAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CCCCTTATCCGGCCTACAAATTCTTCCCAA‑TTCAATAT‑TTTGCAGAAATCATTTAGGCCTGATAAGCGAAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAg                                                                                                                                                                                                                 >  2:453959/1‑239 (MQ=38)

                              tGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGa                                                                                                                                                                                                                <  2:720019/239‑1 (MQ=255)

                                tCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGaa                                                                                                                                                                                                               >  1:1500257/1‑238 (MQ=255)

                                tCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGaa                                                                                                                                                                                                               >  1:215658/1‑238 (MQ=255)

                                                          cGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCg                                                                                                                                                                                    >  1:1301559/1‑239 (MQ=255)

                                                              cgcagcTTTTTTGAAGCGTTTTCCGGCTTTTCTAAACGCCGGAACGGTGCGTTTTTTTTATGCCAGATG‑CGGCGTAAC‑CGCTTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATTTAGGCCTGATAAGCGTAGCGAC‑TCAGGCAT‑TTTTTAGTGCCTTCCAGCCCGGTC‑TTTTTCTAT‑CTC‑TCCCGCCAAAATCTTCCCCCCCGCCTCAATTTTCTCCGGct                                                                                                                                                                                 <  2:1448955/237‑1 (MQ=255)

                                                                 aggcTGTTTGATACGTTTACCGGCGTTTCACAACGCCGGAACAGTGCGTTTTTTTTATGCCAGATG‑CGTCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCAAAT‑TTCAATAT‑ATTGCAGAAATCTTGTGGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCCGCCCAGGC‑TCTTTCTAT‑CTC‑TCCCGCCAAATTCTCCCCCCCCGCCTCAATTTTCTCCGGCTCTg                                                                                                                                                                              <  2:1588431/235‑1 (MQ=37)

                                                                         agcgcactgttCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGt                                                                                                                                                                     >  1:2069907/10‑239 (MQ=255)

                                                                            accGTTTCCAGGCTTTTCTAACCGCCAGCACAGTGGCTTTTTTTTAGGCCAGATG‑GGACTTAAA‑CGCCTTATCCGGCCACCAAATTCTTCCAAA‑TTAAATAT‑TTTGCAGAATTCATGTAGGCTTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTTCCTTGCAGCCCAGGC‑TTTTTCTGT‑CTC‑TGCCGCCAAAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCa                                                                                                                                                                  <  2:1487999/237‑1 (MQ=25)

                                                                            aaCGTTTTCGGGCGTTTCTAAACGCCGGAACAGTGCGTTTTGTTTATGCCAAAGG‑CGGGTTAAA‑CGCTTTACCGGCCCAACAAATTCTCCCAAA‑TAAAATAT‑ATTGCAGAATTCTTGTAGGCTTGAAAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGCCTTCCAGCCCAGGT‑TTTTTCTAT‑CTC‑TCCCGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCa                                                                                                                                                                  <  2:1128852/239‑1 (MQ=255)

                                                                            aaCGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCCCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCa                                                                                                                                                                  <  1:782604/239‑1 (MQ=255)

                                                                             aCGTTCTCGGGGGTGTCTCAACGCCGTAATGTAGCG‑TTTGGTTATGGCAGTAG‑GGGGATAAACCGCTTTTTCCGGTGTACAACTGCTTCCTAC‑TCAAATAT‑ATTGCATAAGTATTGTGGCCCTGATGGTTGTACCTAA‑TC‑GGCAATTTTTTATGGTCTTACAGCCCCGCT‑TTTTTCTAT‑CTC‑TCCTGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCa                                                                                                                                                                  <  2:2024509/238‑1 (MQ=255)

                                                                              cGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTAAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATg                                                                                                                                                                <  1:81772/239‑1 (MQ=255)

                                                                                 tttCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAgg                                                                                                                                                                                                                                          <  1:977405/165‑1 (MQ=255)

                                                                                 tttCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATgcgc                                                                                                                                                             >  1:195174/1‑239 (MQ=255)

                                                                                 ttcctggCTTTTTTAAACGCTGGAACGTGGCGCTTTGTTTATGCCAGTTG‑CGGCGTAAA‑CGCCTTATCCGGCCAACAAATTCTTCCAAT‑TACAAATT‑ATTGCAGAAATCTTTTAGGCCTAAAAGGCGTGCCGCT‑CCGGGCAT‑TTTTTAGTGCCTTCCACCCCAGTT‑TTTTTCTAT‑CTC‑TCCCGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATgcgc                                                                                                                                                             <  2:1740149/234‑1 (MQ=255)

                                                                                        cGTTTCTCAACGCCGGAACAGTGCGTTTTTTTTATGCCAAAGG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGCCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGCCTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCCCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACAt                                                                                                                                                       <  1:1167150/238‑1 (MQ=255)

                                                                                        cGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACAtt                                                                                                                                                      >  1:1829722/1‑239 (MQ=255)

                                                                                         ttttctaacggCCGGACCGGGGCGTTTTTTTTATGCCAGATG‑CGTGGTAAA‑CCCCTTACCCGGCCTAAAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTGGGCCTGATAAGCGTAGCGCA‑TCAGGCAT‑TTTTGAGTGACTTCCAGCCGGGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACAtt                                                                                                                                                      <  2:1301559/228‑1 (MQ=37)

                                                                                                  cGCCGGACCAGGCCGTTTTGTTTATGCCAGATG‑CGGGGTAAA‑CGCTTTTTCCGGCCTACAATTTCTTCCAAA‑TTAAATAT‑ATTTCAGAAATATTGTGGGCCTGATAAGCGTAGCGAT‑TCAGGCAT‑TTTTTGGTGCTTTTCCGCCGGGGC‑TTTTTCTTT‑CTC‑TCCCGCCAGAATCTCCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATg                                                                                                                                            <  2:1618068/239‑1 (MQ=255)

                                                                                                        accgggttcttttgtttgTGCCGGAGG‑CGGCGTAAA‑CGCCTTCTCGGGCTTACAAATTCTTCCAAA‑TTAAATAT‑CTTGCAGAAATCATGTGGGCCTGTGAAGCTTGGCGCA‑TCAGGCAA‑TTTTTAGTGCCTTCCCGCCCAGCC‑TCTTTCTTT‑CTC‑TTCCGCAAGAATCTCCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGcc                                                                                                                                       <  2:1343027/228‑1 (MQ=255)

                                                                                                        accAGGGCGCTTTTTTTATGCCAGATG‑CGGCGTAAG‑CGCTTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGTTAGGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGATTCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGcc                                                                                                                                       <  2:195174/236‑1 (MQ=255)

                                                                                                         cccagtggtcttGTTTATTCCCGCTG‑GGGAGTTAA‑CCCCTTATACGGGCCATAAAATTGTCCAAATTTAAATAA‑ATTGCGAAAATTATGTTGCCCTGTTAAGCGTACCGGA‑TCAGGCAA‑TTTTTAGGCACTTTCAGCCGGGGT‑TTTTTCTTC‑CTC‑TTCCGCGAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGcc                                                                                                                                       <  2:197663/228‑1 (MQ=255)

                                                                                                             tgcttttttttAATGCC‑GATGCCGGCGTAAC‑CGCTTTTCCCGGCCTACAAATCCTTCAAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCTTAGCGCA‑TCAGCCAA‑TTTTTAGTGCCTTCCACCCCAGTC‑TCTTTCTAC‑CTC‑TCCCGCAAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTg                                                                                                                                                                              <  2:1783881/189‑1 (MQ=255)

                                                                                                             tGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGtt                                                                                                                                 >  2:1547569/1‑239 (MQ=255)

                                                                                                             tGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGtt                                                                                                                                 >  1:2003334/1‑239 (MQ=255)

                                                                                                             tGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGtt                                                                                                                                 >  1:1345346/1‑239 (MQ=255)

                                                                                                                      tttATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGc                                                                                                                         >  2:1262747/1‑238 (MQ=255)

                                                                                                                       ttATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCGTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TCCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGcc                                                                                                                        <  1:16224/238‑1 (MQ=255)

                                                                                                                       ttATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGc                                                                                                                         >  2:755048/1‑237 (MQ=255)

                                                                                                                           gCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTggg                                                                                                                   >  2:1080574/1‑239 (MQ=255)

                                                                                                                                aTG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAC‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCAAGCTCTggaacgac                                                                                                              >  2:1523460/1‑233 (MQ=255)

                                                                                                                                aTG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCATCCCTGGgaagaa                                                                                                              >  2:835861/1‑239 (MQ=255)

                                                                                                                                aTG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTAAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGgaagca                                                                                                              >  2:604459/1‑237 (MQ=255)

                                                                                                                                     ggcgTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCCCA‑TCAGGCAA‑TTTTTAGTGCCTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTtg                                                                                                          <  1:1898408/239‑1 (MQ=255)

                                                                                                                                      gcgTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATCCATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTtgt                                                                                                         >  2:433414/1‑239 (MQ=255)

                                                                                                                                       cgTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTtgt                                                                                                         >  1:1436295/1‑238 (MQ=255)

                                                                                                                                         tAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGc                                                                                                       >  1:2182593/1‑238 (MQ=255)

                                                                                                                                           taaaccttgttCCGGGCCACAAATTTTTTCAAATTTCATTTT‑ATTGCAAAATTCATTTGGGCGTGATACGCGTAGCCAC‑TCGGGAAA‑TTTTTATTCCCTTACCCCCCAGGT‑TTTTTCTAT‑CTC‑TTCCGCAAAATTCTCCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGcc                                                                                                      <  2:1434888/229‑1 (MQ=255)

                                                                                                                                              cGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCTCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCgg                                                                                                  <  1:113185/239‑1 (MQ=255)

                                                                                                                                               gCCTTATCCGTGCTAAAAATTCTTCAAAA‑TTCAATAT‑TTTGCAGAAATCATGTAGGCCTGATAAGGTTAGCTCA‑TCAGCCAT‑TTTTTTGTTCCTTTCAGCCCGGGT‑TTTTTCTAT‑CTC‑TTCCGCAAGATTCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGc                                                                                                 <  2:1500257/239‑1 (MQ=255)

                                                                                                                                                    aTCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATg                                                                                                                                            <  1:569760/191‑1 (MQ=255)

                                                                                                                                                    aTCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATg                                                                                                                                            >  2:569760/1‑191 (MQ=255)

                                                                                                                                                         gCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCAt                                                                                            >  1:1594859/1‑234 (MQ=255)

                                                                                                                                                         gCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGc                                                                                        >  1:551534/1‑238 (MQ=255)

                                                                                                                                                          ccTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAATTCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCa                                                                                       >  2:489941/1‑238 (MQ=255)

                                                                                                                                                          ccTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCAc                                                                                      >  1:109608/1‑239 (MQ=255)

                                                                                                                                                              cAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACg                                                                                                                                                                         <  1:482350/152‑1 (MQ=255)

                                                                                                                                                               aattttttcCAAA‑TTAAATAT‑TTTGCAGAAATCATATGGGCCTGTTAAGCTGTCCGCT‑TATGGAAA‑TTTTTGGTGTCTGCCCGCCCAGTC‑TTTTTCTTC‑CTT‑TCCCGCAAGAATTTCCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCATCATCAGCAcgccgc                                                                                 <  2:2120017/233‑1 (MQ=255)

                                                                                                                                                                aaTTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGCTAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCcgcg                                                                                <  1:1779573/239‑1 (MQ=255)

                                                                                                                                                                      tcCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATg                                                                                                                                                  >  1:1378818/1‑167 (MQ=255)

                                                                                                                                                                      tcCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCtt                                                                           >  1:1554411/1‑238 (MQ=255)

                                                                                                                                                                       ccAAA‑TTCAATATGTTTGCAGCAATACGGTGTGCCTGATAGGCGTCACTCA‑CACGCCAA‑TTTTTCTTG‑CCTTCCGCCCAGTCTTTTTTCTAT‑CTC‑TTCCGCAGGATTCTCCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCttt                                                                          <  2:66853/239‑1 (MQ=255)

                                                                                                                                                                          aa‑TTCAATAT‑ATTGCAAAAATCATGTAGGCCTGATAGGCGTAGCCCA‑TCAGGCAT‑TTTTTAGTGCCTTTCAGCCCAGGC‑TTTTTCTAT‑CTC‑TCCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGct                                                                                                                                                                                 <  2:1940234/132‑1 (MQ=255)

                                                                                                                                                                           a‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGgc                                                                     <  1:1249575/239‑1 (MQ=255)

                                                                                                                                                                              taaaatt‑atGGCAAAAATCTTTTGGGCCTGATAAG‑GTTTCGCACTCAGGCAA‑TTTTTATGGCCTTCCCCCCCAGCC‑T‑TTTTTTT‑CTCTTTCCGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGgcgc                                                                   <  2:109608/233‑1 (MQ=255)

                                                                                                                                                                                    t‑atTGAAGAAATAATTTGGCCTTGATAGGTGTCTCGCC‑TCGGGCAT‑TTTTTAGTACCTTCCCGCCCGGCC‑TTTTTTTTT‑CTC‑TTCCCCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATag                                                             <  2:1829722/239‑1 (MQ=255)

                                                                                                                                                                                      atTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTa                                                                                                                                                                       >  1:1940234/1‑132 (MQ=255)

                                                                                                                                                                                        tGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATc                                                                                                                             >  1:368336/1‑172 (MQ=255)

                                                                                                                                                                                        tGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATaga                                                            >  2:2163823/1‑237 (MQ=255)

                                                                                                                                                                                        tGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATaga                                                            >  1:1061260/1‑237 (MQ=255)

                                                                                                                                                                                        tGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATaga                                                            >  1:865212/1‑237 (MQ=255)

                                                                                                                                                                                        tGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATaga                                                            >  1:745406/1‑237 (MQ=255)

                                                                                                                                                                                        tGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATCGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATagag                                                           >  2:962803/1‑238 (MQ=255)

                                                                                                                                                                                         gCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATaga                                                            >  1:1116149/1‑236 (MQ=255)

                                                                                                                                                                                          cAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAgct                                                         >  1:634162/1‑238 (MQ=255)

                                                                                                                                                                                               aTCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTgg                                                   >  2:1190230/1‑239 (MQ=255)

                                                                                                                                                                                               aTCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTgg                                                   >  1:1790947/1‑239 (MQ=255)

                                                                                                                                                                                               aTCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTgg                                                   >  2:24026/1‑239 (MQ=255)

                                                                                                                                                                                                        gCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATgg                                          >  2:1210938/1‑239 (MQ=255)

                                                                                                                                                                                                          cTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATggg                                         >  1:1485833/1‑238 (MQ=255)

                                                                                                                                                                                                           tGATAAGCGTCGCGCC‑TCCGGCAT‑TTTTTAGTGTCTTCCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCCCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCa                                       <  1:1414122/239‑1 (MQ=255)

                                                                                                                                                                                                            gaaaaGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGATTTTCAGCCCAGCC‑TTTTTCTAT‑CTC‑TTCCGCCAGAATCTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCaa                                      <  1:1686904/236‑1 (MQ=255)

                                                                                                                                                                                                             aTAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCg                                                                                                                                                                                    <  1:1495337/96‑1 (MQ=255)

                                                                                                                                                                                                                  cGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCtt                                >  2:910024/1‑239 (MQ=255)

                                                                                                                                                                                                                  cGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCtt                                >  1:996098/1‑239 (MQ=255)

                                                                                                                                                                                                                  cGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCtt                                >  1:1202165/1‑239 (MQ=255)

                                                                                                                                                                                                                  cGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTATCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCtt                                >  2:225469/1‑239 (MQ=255)

                                                                                                                                                                                                                   gTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTa                               >  2:2007209/1‑239 (MQ=255)

                                                                                                                                                                                                                    tAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTaa                              >  1:1234377/1‑239 (MQ=255)

                                                                                                                                                                                                                       cgcA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTggg                                                                                                                   >  1:2099047/1‑151 (MQ=255)

                                                                                                                                                                                                                       cgcA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAAcc                           >  1:237448/1‑239 (MQ=255)

                                                                                                                                                                                                                       cgcA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAAcc                           >  2:1918022/1‑239 (MQ=255)

                                                                                                                                                                                                                       cgcA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAAcc                           >  1:1849317/1‑239 (MQ=255)

                                                                                                                                                                                                                        gcA‑CCAGGAAA‑TTTTTAGTGATTTTCGGCCCTTGC‑TCTTTCTAT‑CTC‑TTCCGCCAAAATCTGCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAAcc                           <  1:408345/238‑1 (MQ=255)

                                                                                                                                                                                                                             cAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAACCATAg                       >  2:428390/1‑238 (MQ=255)

                                                                                                                                                                                                                                   cttttttAGTTCCTTCCCGCCC‑GGC‑TCTTTGTATCCTC‑TTCCGCAGGATTGTTCCCCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAACCATAGCCagag                 <  2:136046/237‑1 (MQ=255)

                                                                                                                                                                                                                                   attttttAGTGCCTTTCAGCCCAGGC‑CTTTTTTTT‑GTC‑TCCCCCCAGAACCTCCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGAGGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAACCATAGCCagag                 <  2:2050396/237‑1 (MQ=255)

                                                                                                                                                                                                                                                  tCACCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATTTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAACCATAGCCAGAGGAAAATGGCTCCTTc  <  1:1039919/239‑1 (MQ=255)

CTGCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGAAACGTTTTCCGGCGTTTCTCAACGCCGGAACAGTGCGCTTTGTTTATGCCAGATG‑CGGCGTAAA‑CGCCTTATCCGGCCTACAAATTCTTCCAAA‑TTCAATAT‑ATTGCAGAAATCATGTAGGCCTGATAAGCGTAGCGCA‑TCAGGCAA‑TTTTTAGTGACTTTCAGCCCAGGC‑TCTTTCTAT‑CTC‑TTCCGCCAGAATCTTCACCCCCGCCTCAATTTTCTCCGGCTCTGGTACGTAGTTCATGCGCATACATTGATGCGTATGCGGCCACGGTTTATCCAGCCCTGGGAAGAAGTTGTGCCCCGGCACCATCAGCACGCCGCGTGCTTTCAGGCGCTGATAGAGCTGCTTGGTCGTAATGGGCAAATCCTTAAACCATAGCCAGAGGAAAATGGCTCCTTC  >  NC_007779/3899231‑3899705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`