BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,463,104	A→C	11.4%	T156P (ACC→CCC)	pmbA →	metalloprotease PmbA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,463,104	0	A	C	11.4%	287.0 / 3.3	139	T156P (ACC→CCC)	pmbA	metalloprotease PmbA
Reads supporting (aligned to +/- strand): ref base A (67/53); new base C (4/15); total (71/68)
Fisher's exact test for biased strand distribution p-value = 6.04e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 140 total aligned reads displayed.

TAGCGCATCATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTC  >  NC_007779/4462869‑4463342

tAGCGCATCATCCACCGATTTAAGCCCGCAGTCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGGGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCAc                                                                                                                                                                                                                                                   <  1:1552321/237‑1 (MQ=255)

 aGCGCATCATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑a                                                                                                                                                                                                                                                <  1:1287274/238‑1 (MQ=255)

  gcgcATCATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATAACTCGCCAGATCCCTGTGCCGGAGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGCTGAAGC‑CATTGA‑AGTGGAGG‑CCCGCCG‑CGGACCGGC‑GGCCA‑TGCCAGGCGG‑‑CAAA‑AGCATCAcccaa                                                                                                                                                                                                                                               >  2:1271207/1‑236 (MQ=255)

        catcCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCCGTACC‑ACTACCCaa                                                                                                                                                                                                                                        >  2:1455253/1‑239 (MQ=255)

         atcCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAg                                                                                                                                                                                                                                       >  1:1629024/1‑239 (MQ=255)

            cACCGATTTAAGCCCGCAGGCCATTGCACGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTg                                                                                                                                                                                                                                    <  1:1980957/239‑1 (MQ=255)

             aCCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACACAGAGCTGCCGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACCGGCGG‑CCCGCGC‑AGTACAGGC‑GG‑CC‑ATGCAGGCGGG‑CAAACCGCA‑CCCC‑AAAACCGAAgcggg                                                                                                                                                                                                                                   >  2:652782/1‑235 (MQ=255)

              gcGATTTAATCCCGCAGGCCCTTGCCCGTCCTTTACAGGCGGCGCTGGATATTGCCCGT‑TATCCCGCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGc                                                                                                                                                                                                                                  <  1:2226805/238‑1 (MQ=255)

                gaattAAGCCCGCCGGCCATTGCCCGTACTGTTTAGGCTGCGCTGGTCATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGGTGCTTGCCTTTGACGCTCCAGATCTCGACTTGTTCCGCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑TCTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAg                                                                                                                                                                                                                                <  2:1683797/236‑1 (MQ=255)

                     aaGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGG‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCCCCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGGACAGGC‑GG‑CA‑TTGCCGGCCGC‑CAAA‑CGCCTCACC‑CATACCGAAAGAGGCAGCTTTa                                                                                                                                                                                                                           >  1:671395/1‑239 (MQ=255)

                         ccGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATCCCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGTCTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑c                                                                                                                                                                                                                        <  1:440483/237‑1 (MQ=255)

                            cAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGGTCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAAAAGGC‑GG‑CA‑TTGCAGGCGGA‑CCAA‑ACCATCCCC‑AAAACCGAAGGAGGCAGCCTTAA‑CAAcc                                                                                                                                                                                                                    >  1:1527743/1‑238 (MQ=255)

                            cAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGcc                                                                                                                                                                                                                    >  1:60278/1‑238 (MQ=255)

                                    tGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CATCCACTAC‑Ggtg                                                                                                                                                                                                          >  1:939188/1‑239 (MQ=255)

                                           aCTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGGGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCCGAAGTTT‑CCCCGGATGAAGC‑CCTTGA‑ACTGGCGG‑CCCGCCC‑AGAACAGGC‑GG‑CA‑TTGGCGGCGGC‑CAAA‑AGCCGCACC‑ACCACCGACAGCGGGAGCTTTAA‑AACCCCCCAC‑GGGGTGaa‑aat                                                                                                                                                                                                  >  2:167961/1‑237 (MQ=255)

                                               tACAGGCGGCGCTTGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACCGGCGG‑CCCCCGC‑CGAACAGGC‑GG‑CC‑TTGCAGGCGGA‑CAAA‑AGCATCACC‑AATACCCAAAGGGGCCGCGTTCA‑CAGCCAATAC‑AGGCGCCA‑AGttttt                                                                                                                                                                                              >  2:324738/1‑239 (MQ=255)

                                               tACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGttttt                                                                                                                                                                                              >  1:764265/1‑239 (MQ=255)

                                               tACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGCGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGttttt                                                                                                                                                                                              >  1:1252189/1‑239 (MQ=255)

                                                aCAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTTGCCTTTGACGCACCCAATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑AATGGCGG‑CCCGCGC‑AGAAAAGGT‑CG‑CA‑ATGCAGGCGGAGCAAA‑CG‑AGCACC‑AAAACCCAAGGTGGCAGCCTTTA‑CACCCACAAC‑AGTGACAACAGttttg                                                                                                                                                                                              >  2:1583530/1‑238 (MQ=255)

                                                 cAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCCCCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑CGAACAGGC‑GG‑CA‑TTGCAAGCGGG‑CAAA‑CGCACCACC‑AATAACGAAAGGGGCAGCCTTAA‑CCGCCACTAC‑GGGGTCCA‑ACATTTTg                                                                                                                                                                                             >  2:1917684/1‑238 (MQ=255)

                                                    gcggcgCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCAcc                                                                                                                                                                                                                                                  <  2:675476/186‑1 (MQ=255)

                                                    gcggcgCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCa                                                                                                                                                                                          >  1:2121951/1‑238 (MQ=255)

                                                     cggcgCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTCCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCaa                                                                                                                                                                                         <  1:1042343/238‑1 (MQ=255)

                                                     cggcgCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTCCCCCCCTGCGGAAG‑TT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAAc                                                                                                                                                                                        <  1:220099/238‑1 (MQ=255)

                                                         gcTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGGTGGCCTTTGACCCACCAGATCCCGACCTGATCCACCCCGCGGAAGTTT‑CCCCGGATGTAGC‑CAATGA‑ACTTGCGG‑CCCGGGC‑AAGACATGC‑GG‑CACTGGCCGCGGGA‑CAAA‑‑GCAAAAAC‑CCAACCCAAGGGGGGAGGCTTTA‑CAACCAACAC‑GATGTTAA‑AATTTTTGGCaaaaag                                                                                                                                                                                     >  2:1512769/1‑234 (MQ=255)

                                                         gcTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCCCCC‑AGAACCGGC‑GG‑CA‑TTTCAGGCCGA‑CCAA‑CACATCCCCAAATACGAAAGGGGGC‑GCATTAA‑ACGCCACTACGGGGGCCAA‑TGTTTTGGGCaaagc                                                                                                                                                                                      >  2:1004873/1‑235 (MQ=255)

                                                            ggATATGGCCCGT‑TATACCTCGCCAGATCCCGGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTGGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACg                                                                                                                                                                                 <  1:652782/239‑1 (MQ=255)

                                                             gATATTCCCCGT‑TATCCGTCGCCAGATCCGGGTGCGGGCGGGGCAGACAAGGAGCGGGGGGGCTGGGACGCACCAGATCTCGACTTGTTCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACGGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCCCC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACg                                                                                                                                                                                 <  1:215385/238‑1 (MQ=255)

                                                               tatTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGc                                                                                                                                                                               <  1:324738/238‑1 (MQ=255)

                                                                atTGCCCCTGTATCCCCCGCAAGATCCCTGTGCGGGGGGGCCAAAAAAAGAGTGCCGGGCCTTCGCAGCACCAAACCCCGCTTTGTCCCCCCCGGGGGAGTTTC‑CCCCGGAGAAAGC‑CATTGA‑CCGGGCGG‑CCCGCGC‑AGACCAGGC‑GG‑CA‑TTGCAGGCGGA‑AAAC‑CGCAGCACC‑AATCCCGAAGGTGGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGc                                                                                                                                                                               <  2:1252189/238‑1 (MQ=255)

                                                                  tGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGAGGCAGACCAAGCGCTGCCGGCCTTAGACGCAACAGACCTCGACTTGTTCCAACCTCCGGCAGTTT‑CCCCGAATGAACC‑CCTTGA‑ACTTGCGC‑CCCCCGC‑AACCCCAGC‑GG‑CA‑TTGGACGCGGA‑AAAA‑AGCCTTACC‑AATCACACAGGGGGGAGCTTTAA‑AAGGCACCAC‑CGTGCAAA‑CACTCTTTGCAACAGcccacggattt                                                                                                                                                                           >  2:1903784/1‑230 (MQ=255)

                                                                    cccGT‑TACCCCCCGCCAGACCCCGGGCGCGGGGTGGCAGAAAAAGGGCTGCGGGCTTTGGCCGCCCCAGATCTCGATTTGTCCCCCCCGGGGGAAGTTC‑CCCGGGATGAGGC‑CA‑TGA‑ACCGGGGGCCCCGCGC‑AGAACGGGG‑GG‑CA‑TTGCAGGCGGA‑AAAA‑CGCATCCCC‑AATACGGAGGGTGGCAGCTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTg                                                                                                                                                                         <  2:614317/239‑1 (MQ=255)

                                                                       gT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGCGCTGCTGGTCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACGGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAGGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAg                                                                                                                                                                      <  1:1043564/239‑1 (MQ=255)

                                                                       gT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑TATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAg                                                                                                                                                                      >  1:619124/1‑239 (MQ=255)

                                                                       gT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAg                                                                                                                                                                      >  1:1449861/1‑239 (MQ=255)

                                                                          tataCCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGGTTTTGGCAACAGCCACGGCATGTTGCAggg                                                                                                                                                                    >  1:1430205/1‑239 (MQ=255)

                                                                          tataCCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑AAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAggg                                                                                                                                                                    >  1:260561/1‑239 (MQ=255)

                                                                               cTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGGACCCCC‑AATACCGAAGGGGGGCGGTTTAA‑AAACCCACAC‑GGGGGCAA‑CATTTTTGGCAACAGCCACGGGCTGTTTCAGGGTTaag                                                                                                                                                               >  2:611586/1‑237 (MQ=255)

                                                                                 cGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACCAC‑GGGGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCCGGGTTACTg                                                                                                                                                              >  2:384545/1‑238 (MQ=255)

                                                                                  gCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CACA‑CGCATCACC‑AATACCGAAGGCGGCAGCTTTCA‑CAGACACTAC‑GGTGTCAA‑AATGTTTGGCCAAACACCGGGCCAGTTGCAGGGTTACTGc                                                                                                                                                             >  2:1470981/1‑238 (MQ=255)

                                                                                   ccAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑AGCATCACC‑AATACCCAAAGAGGGAGCTTTAA‑CAGCCACCAA‑GGTGGCAA‑AGTTTTTGGCAAAAACCACGGCATGGTGCAGGGTGACCGcca                                                                                                                                                           >  2:921717/1‑237 (MQ=255)

                                                                                        ccccTGCGCCGGCGGGGCAGAAAAAGCGGTGCTGCCCTTGGACGCCCCAGCTCTCGTTTTGTCCCCCCCTGGGGAAGTTT‑CCCGGGATGAGGC‑CATTGA‑ACGGCCGC‑CCCGCGC‑AGAACAGGG‑GG‑CT‑TTGCGGGCGGA‑CAAA‑CGCACCACC‑AATCCCGAGGGTGGCAGCTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCaa                                                                                                                                                         <  2:432089/235‑1 (MQ=255)

                                                                                         cccTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑CATACCGAAGGGGGCAGCTTTAA‑AAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCAAGGCATGTTGCAGGGGTCACGCTCAAcca                                                                                                                                                      >  2:957417/1‑236 (MQ=255)

                                                                                               gcgggCGTGGGGGACAAGGTGCTGCTGGCCTTGCGCGCACTAAATCGCAGCTTTGCCCCCCCGGCGGCTGTGC‑CCCGGGATGAGCA‑CATGGA‑ACTGGCGG‑CCGGCGC‑AAAGGGGGG‑GG‑TT‑TTGCGGGGGAA‑CAAC‑CGCATCCCC‑ATGCCGGAAGGGGGAGTCTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCAtt                                                                                                                                                <  2:319124/235‑1 (MQ=255)

                                                                                               gCCGGGGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCAtt                                                                                                                                                <  1:921717/238‑1 (MQ=255)

                                                                                                  ggCGTGGCAGACAAATAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACA‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGct                                                                                                                                            <  1:832743/239‑1 (MQ=255)

                                                                                                  ggCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACCAC‑GGGGTCAA‑AGCTTTTGGCAAAAGCCACGGCATGTTGCAGGGTTAATTCTCAACGAGTCATTCgt                                                                                                                                             >  2:1058737/1‑237 (MQ=255)

                                                                                                   gCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGc                                                                                                                                             >  1:1483003/1‑237 (MQ=255)

                                                                                                      tGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGGTACTGCTCAACGCGTCATTCGCtctc                                                                                                                                         >  1:749759/1‑238 (MQ=255)

                                                                                                      gggCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑CCGGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCCCC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCtctc                                                                                                                                         <  1:1046662/237‑1 (MQ=255)

                                                                                                          aGACAAAGCGCTGCTGGCCTTGGACGCCCCAGATCTCGACTTGTTCCCCCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCCCC‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGc                                                                                                                                     <  1:179129/238‑1 (MQ=255)

                                                                                                                agagCTGCTGGCGTTGGACGAACCAGATCTCGACTTGTCCCACCCGGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACGGGC‑GG‑AA‑TTGCAGGCGGA‑CAAA‑GGCATCACC‑AATCCCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTaa                                                                                                                              <  1:1230795/239‑1 (MQ=255)

                                                                                                                       ctgGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCga                                                                                                                       >  1:737300/1‑239 (MQ=255)

                                                                                                                       cggccctcacaCGCCCCAGCTCTCGACTTGTCCCCCCCTGCGGAAGTTC‑CCCCGGATGAAGC‑CATGGA‑ACGGGCGC‑CCCGCGC‑AGACCAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAC‑CGCATCACC‑AATACCGAGGGTGGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCg                                                                                                                        <  2:764265/228‑1 (MQ=255)

                                                                                                                           ccTTTGACGCACCAGACCTCGCTTGGTTCCCCCCGGCGGAGGTTT‑CCCGGGAGGAAGC‑AATTGA‑ACGGGCGG‑CCCGCGC‑AGAACGGGC‑GG‑CA‑TTGAGGGCGGA‑AAAA‑CGCATCACC‑ATTACCGAGGGGGGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCgaagaa                                                                                                                   <  2:694495/239‑1 (MQ=255)

                                                                                                                             ttgcacgccacAGATCTCGACTTGTCCCCCCCGGCGGAAGTTC‑CCCCGGAGGAAGC‑CATGGC‑ACGGGCCG‑CCCGGGA‑AAAGAGGGC‑GG‑GT‑TTGCGGGCGGA‑CAAA‑CGCATCACC‑ACGAGCGAAGGTGGCTGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGaaaa                                                                                                                 <  2:737300/229‑1 (MQ=255)

                                                                                                                                 aCGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAAGGGc                                                                                                             >  1:1700985/1‑239 (MQ=255)

                                                                                                                                  cGCACCAGATATCGACTTGTTCCCCCCGGCGGAAGTTC‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACA‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCg                                                                                                            <  1:2030243/239‑1 (MQ=255)

                                                                                                                                       cAGATCTCGACTTGTCCCACCCTGCGGAAGTTT‑CCCCGGAGGAAGC‑CATTGA‑ACGGGCGG‑CCCGCGC‑AGAACAGGG‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATg                                                                                                       <  1:167961/239‑1 (MQ=255)

                                                                                                                                         gATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTAAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGa                                                                                                     >  1:1348499/1‑239 (MQ=255)

                                                                                                                                            ttctctttGTGCCCCCCTGGAGGAGTTT‑CCCGGGGAGAAGCTCGTTGA‑GCTGCGGC‑CCCGCGG‑AGAAGGGGG‑GG‑TA‑TGGGGGGGGGA‑CAAA‑CCCGTCCCA‑AATCCGGAGGGTGGGATCTTAAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGc                                                                                                   <  2:1756499/233‑1 (MQ=255)

                                                                                                                                               gACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGa                                                                                               >  1:113731/1‑239 (MQ=255)

                                                                                                                                                 ctggtcccccccTCCGGAAGTCC‑CCCCGGAGGAACC‑CATAAA‑CCGGGCGG‑CCCGCGC‑AGAACAGGG‑GG‑AA‑TTGCAGGCGAA‑CAAC‑CGCACCACC‑AATACCGAGGGTGGCATTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGAt                                                                                              <  2:260561/229‑1 (MQ=255)

                                                                                                                                                 cTTGTCCCCCCCTGCGGAATTTT‑CCCCGGATGAAGC‑CATTGA‑CCGGGCCG‑CCCGCGC‑GAAAGGGGG‑GG‑GT‑TTGGAGGCGAA‑CAAC‑CGCTTCCCA‑AATCACGAGGGTGGCATGTTAAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGAt                                                                                              <  2:734746/238‑1 (MQ=255)

                                                                                                                                                   tGTCCCCCCCTGGGGAATTTT‑CCCCGGAGGAAGC‑CTTTGA‑ACGGGCGG‑CCCCCGA‑AGAACGGGC‑GG‑CA‑TTGCAGGCGAA‑AAAA‑CGATTCCCC‑AATACCGAAGGGGGCAGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTAc                                                                                           <  1:1309455/239‑1 (MQ=255)

                                                                                                                                                    gTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCAtt                                                                                                                                                <  1:789189/185‑1 (MQ=255)

                                                                                                                                                     ttCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGACGAAAATGGCGATATGGAGCGGGATTACg                                                                                          >  1:1481688/1‑238 (MQ=255)

                                                                                                                                                      tCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCCTGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAg                                                                                                                                      >  1:1909020/1‑193 (MQ=255)

                                                                                                                                                       ccgccgtGCGGCAGTTC‑CCCCGGATGAAGC‑AATAGA‑CCGGGCGG‑CCCGCGC‑AGAACGGGC‑GG‑CA‑TGGCAGGCGGA‑CAAG‑CGCATCACA‑AATCCCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCt                                                                                       <  2:60278/233‑1 (MQ=255)

                                                                                                                                                       cccccgggaggAAGTGC‑CCCCGGAGGACGA‑CATTGA‑GCTGGCGG‑CCCGCGC‑AGAGCAGGG‑GG‑CA‑TTGAAGGCGGA‑CAAA‑CGCATCACA‑AATACGGAGGGGGGCAGTTTAAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCt                                                                                       <  2:819345/230‑1 (MQ=255)

                                                                                                                                                         ccccGGCGGAATTTC‑CCCGGGGAGAGGC‑CATGGA‑ACGGGCGC‑CCCGGCC‑AGAACGGGG‑GC‑CA‑TTGCAGGCGGA‑CAAC‑GGCACCACC‑AATCCCGAAGGGGGCTGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTac                                                                                     <  2:2176512/238‑1 (MQ=255)

                                                                                                                                                          cccTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTCC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTGGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTatcacgaa                                                                                     >  2:1182841/1‑231 (MQ=255)

                                                                                                                                                          cccTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCaa‑a                                                                                                                                                                                                    >  1:1735214/1‑127 (MQ=255)

                                                                                                                                                          cccTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTac                                                                                     >  1:901125/1‑238 (MQ=255)

                                                                                                                                                           ccTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTa                                                                                                                                                                                                                >  1:2018695/1‑116 (MQ=255)

                                                                                                                                                             tGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGCGTCAA‑AGTTTTTGGCAACAGCCACGGCAAGTTGCAGGGTTACTGCTCAACCCCTCTTTCGCTCTCCCGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGCTTACGCCCACCCCa                                                                                 >  2:22615/1‑239 (MQ=255)

                                                                                                                                                              gCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCAt                                                                                >  1:416977/1‑239 (MQ=255)

                                                                                                                                                               cGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCAtt                                                                               >  1:270044/1‑239 (MQ=255)

                                                                                                                                                               cGGAAGTTT‑CCCCGGATGAAGC‑CATGGA‑ACGGGCGG‑CCCGCGA‑AGAACGGGC‑GG‑CA‑TCGCAGGCGGA‑CAAA‑CGCATCACC‑AAGCCCGAGGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCAt                                                                                <  1:1182841/238‑1 (MQ=255)

                                                                                                                                                                cagaGTTTCCCCCGGAGGAGGC‑CATGGA‑CCGGGCGG‑CCCGCGA‑AGAACGGGC‑GG‑AT‑TGGCGGGCGAA‑AAAA‑CGCATCCCA‑ATTACGGAAGGGGGCAGCTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCAt                                                                                <  2:2110147/235‑1 (MQ=255)

                                                                                                                                                                   aGTTT‑‑CCCGGGTGGAGG‑CATTGACACGGGCGG‑CCCGCGG‑AGAGCGGGG‑GG‑AA‑TGGAAGGGGGC‑AAAA‑GCCATCACC‑ATCCCCGAAGGAGGGATCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGt                                                                            <  2:961941/238‑1 (MQ=255)

                                                                                                                                                                      tt‑CCCCGGAAGAAGC‑CATTGA‑ACGGGCGC‑CCGGCGC‑GAACCAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACA‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGt                                                                         <  1:1975777/238‑1 (MQ=255)

                                                                                                                                                                        cccccGGAGAAACC‑CATGAA‑ACGGGCGG‑CCCGCGA‑AGAACAGGC‑GG‑CA‑TTGCAGCGGGA‑AAAA‑CGCATCACC‑AATACGGAAGGGGGCAGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGc                                                                       <  1:1095624/238‑1 (MQ=255)

                                                                                                                                                                                        aTTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCa                                                        <  1:611586/239‑1 (MQ=255)

                                                                                                                                                                                           taaacctgggg‑cCCGGGA‑AGAACAGGC‑GG‑CA‑GTGCAGGCGCA‑CAAC‑GGCAACAGC‑AAGACCGAGGGGGCCAGTTTTAC‑CAGCCTCTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCaaa                                                      <  2:416977/230‑1 (MQ=255)

                                                                                                                                                                                              ccTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATCCCGAGGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGc                                                   <  1:2153/238‑1 (MQ=255)

                                                                                                                                                                                               cgggcgg‑gCCGCGCGAGAGGGGGC‑AG‑CA‑TGGCAGGGGAA‑CAAA‑CGAATCACC‑AATACGGAAGGAGGCAGTTTACA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACg                                                    <  2:778269/236‑1 (MQ=255)

                                                                                                                                                                                                  gcgg‑cCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCt                                                                                       >  2:1558106/1‑199 (MQ=255)

                                                                                                                                                                                                   cgg‑cCCGCGC‑A‑AACCGGCGGG‑CA‑TTGCGGGGGAA‑CAAC‑CTCATCACA‑AATCCGGAAGTTGG‑ACTTTTAACCAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCaga                                               <  2:901125/238‑1 (MQ=255)

                                                                                                                                                                                                        ccGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTggg                                          >  1:1199351/1‑239 (MQ=255)

                                                                                                                                                                                                        ccGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTggg                                          >  1:1883802/1‑239 (MQ=255)

                                                                                                                                                                                                        ccGCGC‑AAAACGGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTAAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTggg                                          <  1:1760415/239‑1 (MQ=255)

                                                                                                                                                                                                               aGAACAGGC‑GG‑CT‑TTGCAGGGGGA‑CAAA‑CGCATCCCC‑AATACCAAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTggg                                     <  1:1583530/238‑1 (MQ=255)

                                                                                                                                                                                                                   cgggc‑gg‑cA‑TTGCAGGCGGA‑CAAA‑CGCACCACA‑AATCCCGAAGGGGGCAGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGa                                <  1:141568/237‑1 (MQ=255)

                                                                                                                                                                                                                             a‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGGCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTc                        >  2:1810270/1‑239 (MQ=255)

                                                                                                                                                                                                                             a‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGGGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGGAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTc                        >  2:1987131/1‑239 (MQ=255)

                                                                                                                                                                                                                             a‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGCGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCCGTGTAATTGCCGAAGAAAATGGCGATATGGCGCGTGATTACGCCTACACCATTGGTCGTGCAATGATCGAACTTGAAACCGCAGAGCGGGCTGGGGCCGACGGTGcc                         >  2:266142/1‑237 (MQ=255)

                                                                                                                                                                                                                              tttGCAGGCGGA‑CAAA‑CGCATCACA‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCt                         <  1:1473938/237‑1 (MQ=255)

                                                                                                                                                                                                                              tttGCAGGCGAA‑AAAA‑CGCATCCCC‑AATACGGAGGTTGGCAGCTTTCC‑CAGCCCCTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCt                         <  1:1894234/237‑1 (MQ=255)

                                                                                                                                                                                                                               tggCAGGCGAA‑CAAA‑CGCACCACA‑AATACCGAGGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCg                       <  1:159224/237‑1 (MQ=255)

TAGCGCATCATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGG‑CCCGCGC‑AGAACAGGC‑GG‑CA‑TTGCAGGCGGA‑CAAA‑CGCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTC  >  NC_007779/4462869‑4463342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`