BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,463,110	A→C	16.0%	T158P (ACC→CCC)	pmbA →	metalloprotease PmbA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,463,110	0	A	C	16.0%	264.9 / 10.3	139	T158P (ACC→CCC)	pmbA	metalloprotease PmbA
Reads supporting (aligned to +/- strand): ref base A (66/45); new base C (3/23); total (69/70)
Fisher's exact test for biased strand distribution p-value = 7.27e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 139 total aligned reads displayed.

CATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTCACC  >  NC_007779/4462877‑4463345

catcCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCCGTACC‑ACTACCCaa                                                                                                                                                                                                                                           >  2:1455253/1‑239 (MQ=255)

    cACCGATTTAAGCCCGCAGGCCATTGCACGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTg                                                                                                                                                                                                                                       <  1:1980957/239‑1 (MQ=255)

     aCCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CACAGAGCTGCCGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACCGGCGGCCCGCGC‑AGTACAGGC‑GGCC‑ATG‑CAGGCGGG‑CAAACC‑GCA‑CCCC‑AAAACCGAAgcggg                                                                                                                                                                                                                                      >  2:652782/1‑235 (MQ=255)

                    cAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGcc                                                                                                                                                                                                                       >  1:60278/1‑238 (MQ=255)

                    cAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGcc                                                                                                                                                                                                                       >  1:940185/1‑238 (MQ=255)

                                 gTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGCCTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑A‑GCATCACC‑AATACCCAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGGGTCaa‑a                                                                                                                                                                                                       >  1:1088312/1‑239 (MQ=255)

                                   aCTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCCAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGGGTCAA‑Agg                                                                                                                                                                                                     >  1:461895/1‑238 (MQ=255)

                                   aCTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGGGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑CGAAGTTT‑CCCCGGATGAAGC‑CCTTGA‑ACTGGCGGCCCGCCC‑AGAACAGGC‑GGCA‑TTG‑GCGGCGGC‑CAAA‑A‑GCCGCACC‑ACCACCGACAGCGGGAGCTTTAA‑AACCCCCCAC‑GGGGTGaa‑aat                                                                                                                                                                                                     >  2:167961/1‑237 (MQ=255)

                                       tACAGGCGGCGCTTGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACCGGCGGCCCCCGC‑CGAACAGGC‑GGCC‑TTG‑CAGGCGGA‑CAAA‑A‑GCATCACC‑AATACCCAAAGGGGCCGCGTTCA‑CAGCCAATAC‑AGGCGCCA‑AGttttt                                                                                                                                                                                                 >  2:324738/1‑239 (MQ=255)

                                       tACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGttttt                                                                                                                                                                                                 >  1:1902952/1‑239 (MQ=255)

                                       tACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGCGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGttttt                                                                                                                                                                                                 >  1:1252189/1‑239 (MQ=255)

                                        aCAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTTGCCTTTGACGCACCCAATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑AATGGCGGCCCGCGC‑AGAAAAGGT‑CGCA‑ATG‑CAGGCGGAGCAAA‑C‑G‑AGCACC‑AAAACCCAAGGTGGCAGCCTTTA‑CACCCACAAC‑AGTGACAACAGttttg                                                                                                                                                                                                 >  2:1583530/1‑238 (MQ=255)

                                         cAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCCCCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑CGAACAGGC‑GGCA‑TTG‑CAAGCGGG‑CAAA‑C‑GCACCACC‑AATAACGAAAGGGGCAGCCTTAA‑CCGCCACTAC‑GGGGTCCA‑ACATTTTg                                                                                                                                                                                                >  2:1917684/1‑238 (MQ=255)

                                            gcggcgCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCa                                                                                                                                                                                             >  1:2121951/1‑238 (MQ=255)

                                             cggcgCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTCCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCaa                                                                                                                                                                                            <  1:1042343/238‑1 (MQ=255)

                                             cggcgCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTCCCCCCCTGC‑GGAAG‑TT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAAc                                                                                                                                                                                           <  1:220099/238‑1 (MQ=255)

                                                 gcTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGGTGGCCTTTGACCCACCAGATCCCGACCTGATCCACCCCGC‑GGAAGTTT‑CCCCGGATGTAGC‑CAATGA‑ACTTGCGGCCCGGGC‑AAGACATGC‑GGCACTGG‑CCGCGGGA‑CAAA‑‑‑GCAAAAAC‑CCAACCCAAGGGGGGAGGCTTTA‑CAACCAACAC‑GATGTTAA‑AATTTTTGGCaaaaag                                                                                                                                                                                        >  2:1512769/1‑234 (MQ=255)

                                                 gcTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑CGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGGGTCAA‑AGGTTTTGGCAACAGcc                                                                                                                                                                                       >  1:633147/1‑239 (MQ=255)

                                                 gcTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGGCAA‑AGTTTTTGGCAACAGc                                                                                                                                                                                        >  1:1241363/1‑238 (MQ=255)

                                                 gcTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCCCCC‑AGAACCGGC‑GGCA‑TTT‑CAGGCCGA‑CCAA‑C‑ACATCCCCAAATACGAAAGGGGGC‑GCATTAA‑ACGCCACTACGGGGGCCAA‑TGTTTTGGGCaaagc                                                                                                                                                                                         >  2:1004873/1‑235 (MQ=255)

                                                    ggATATGGCCCGT‑TATACCTCGCCAGATCCCGGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTGGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACg                                                                                                                                                                                    <  1:652782/239‑1 (MQ=255)

                                                     gATATTCCCCGT‑TATCCGTCGCCAGATCCGGGTGCGGGCGGGGCAGA‑CAAGGAGCGGGGGGGCTGGGACGCACCAGATCTCGACTTGTTCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACGGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCCCC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACg                                                                                                                                                                                    <  1:215385/238‑1 (MQ=255)

                                                      atatTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCCTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑CCATCACC‑CAAACCCAAAGGGGCAGGTTTAA‑CAAGCACTAA‑GGTGTCAA‑AGTTTTTTGCGAAAGCGACgg                                                                                                                                                                                   >  2:1473938/1‑238 (MQ=255)

                                                       tatTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGc                                                                                                                                                                                  <  1:324738/238‑1 (MQ=255)

                                                        atTGCCCCTGTATCCCCCGCAAGATCCCTGTGCGGGGGGGCCAAA‑AAAAGAGTGCCGGGCCTTCGCAGCACCAAACCCCGCTTTGTCCCCCCCGGG‑GGAGTTTC‑CCCCGGAGAAAGC‑CATTGA‑CCGGGCGGCCCGCGC‑AGACCAGGC‑GGCA‑TTG‑CAGGCGGA‑AAAC‑C‑GCAGCACC‑AATCCCGAAGGTGGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGc                                                                                                                                                                                  <  2:1252189/238‑1 (MQ=255)

                                                          tGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGAGGCAGA‑CCAAGCGCTGCCGGCCTTAGACGCAACAGACCTCGACTTGTTCCAACCTCC‑GGCAGTTT‑CCCCGAATGAACC‑CCTTGA‑ACTTGCGCCCCCCGC‑AACCCCAGC‑GGCA‑TTG‑GACGCGGA‑AAAA‑A‑GCCTTACC‑AATCACACAGGGGGGAGCTTTAA‑AAGGCACCAC‑CGTGCAAA‑CACTCTTTGCAACAGcccacggattt                                                                                                                                                                              >  2:1903784/1‑230 (MQ=255)

                                                            cccTT‑TATCCCTCCCCAGCCCCCGGTG‑CGGGGGGGCCGACCAAAGAGCGGCTGCCCTTTGCCGCCCCAGTTCTCGATTTGTCCCCCCCTGC‑GGACTTTC‑CCCCGGATGAGCC‑CATTAA‑CCGGGGGCCCCGCCC‑GAAACGGGC‑GGCA‑TGG‑CAGGCGGA‑AAAA‑C‑GAACCACC‑AATCCGGAAGGGGGCAGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTg                                                                                                                                                                            <  2:248578/239‑1 (MQ=255)

                                                               gT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGCGCTGCTGGTCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACGGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAGGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAg                                                                                                                                                                         <  1:1043564/239‑1 (MQ=255)

                                                               gT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑TATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAg                                                                                                                                                                         >  1:619124/1‑239 (MQ=255)

                                                               gT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAg                                                                                                                                                                         >  1:1449861/1‑239 (MQ=255)

                                                               gT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAg                                                                                                                                                                         >  1:2110147/1‑239 (MQ=255)

                                                                  tataCCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GGATCACC‑AATACCGAAGGTGGCCGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGGTGCAggg                                                                                                                                                                       >  1:2182903/1‑239 (MQ=255)

                                                                  tataCCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGGTTTTGGCAACAGCCACGGCATGTTGCAggg                                                                                                                                                                       >  1:1430205/1‑239 (MQ=255)

                                                                  tataCCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑AAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAggg                                                                                                                                                                       >  1:260561/1‑239 (MQ=255)

                                                                  tataCCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑CCATCACC‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAggg                                                                                                                                                                       >  1:1526028/1‑239 (MQ=255)

                                                                       cTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GGACCCCC‑AATACCGAAGGGGGGCGGTTTAA‑AAACCCACAC‑GGGGGCAA‑CATTTTTGGCAACAGCCACGGGCTGTTTCAGGGTTaag                                                                                                                                                                  >  2:611586/1‑237 (MQ=255)

                                                                           ccAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑A‑GCATCACC‑AATACCCAAAGAGGGAGCTTTAA‑CAGCCACCAA‑GGTGGCAA‑AGTTTTTGGCAAAAACCACGGCATGGTGCAGGGTGACCGcca                                                                                                                                                              >  2:921717/1‑237 (MQ=255)

                                                                                 cccTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑CATACCGAAGGGGGCAGCTTTAA‑AAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCAAGGCATGTTGCAGGGGTCACGCTCAAcca                                                                                                                                                         >  2:957417/1‑236 (MQ=255)

                                                                                    tgtgCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑ACGCCACTAC‑GGCGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGGCa                                                                                                                                                     >  1:1718185/1‑239 (MQ=255)

                                                                                       gcgggCGTGGGGGA‑CAAGGTGCTGCTGGCCTTGCGCGCACTAAATCGCAGCTTTGCCCCCCCGGC‑GGCTGTGC‑CCCGGGATGAGCA‑CATGGA‑ACTGGCGGCCGGCGC‑AAAGGGGGG‑GGTT‑TTG‑CGGGGGAA‑CAAC‑C‑GCATCCCC‑ATGCCGGAAGGGGGAGTCTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCAtt                                                                                                                                                   <  2:319124/235‑1 (MQ=255)

                                                                                       gCCGGGGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCAtt                                                                                                                                                   <  1:921717/238‑1 (MQ=255)

                                                                                          ggCGTGGCAGA‑CAAATAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACA‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGct                                                                                                                                               <  1:832743/239‑1 (MQ=255)

                                                                                          ggCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACCAC‑GGGGTCAA‑AGCTTTTGGCAAAAGCCACGGCATGTTGCAGGGTTAATTCTCAACGAGTCATTCgt                                                                                                                                                >  2:1058737/1‑237 (MQ=255)

                                                                                           gCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGc                                                                                                                                                >  1:1483003/1‑237 (MQ=255)

                                                                                              tgacaca‑CAAAGAGCTGCTGCCCTTTGACCCTCTTTATTCCGACTTGTCCCACCCGCC‑GGATGTTT‑CCCCGGATGACCC‑CTTTCA‑CCTGGCGGCCCGCCC‑AAATCGGGC‑‑GCT‑TTGCCCGGCGCA‑CAAG‑C‑GCTTCACC‑AACACGGTGGGTGGCGGCTTTCA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCACCAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCtctc                                                                                                                                            <  2:1908852/232‑1 (MQ=255)

                                                                                              tGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGGTACTGCTCAACGCGTCATTCGCtctc                                                                                                                                            >  1:749759/1‑238 (MQ=255)

                                                                                              gggCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑CCGGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCCCC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCtctc                                                                                                                                            <  1:1046662/237‑1 (MQ=255)

                                                                                                  aGA‑CAAAGCGCTGCTGGCCTTGGACGCCCCAGATCTCGACTTGTTCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCCCC‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGc                                                                                                                                        <  1:179129/238‑1 (MQ=255)

                                                                                                                ctgGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCga                                                                                                                          >  1:737300/1‑239 (MQ=255)

                                                                                                                cggccctcacaCGCCCCAGCTCTCGACTTGTCCCCCCCTGC‑GGAAGTTC‑CCCCGGATGAAGC‑CATGGA‑ACGGGCGCCCCGCGC‑AGACCAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAC‑C‑GCATCACC‑AATACCGAGGGTGGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCg                                                                                                                           <  2:764265/228‑1 (MQ=255)

                                                                                                                    ccTTTGACGCACCAGACCTCGCTTGGTTCCCCCCGGC‑GGAGGTTT‑CCCGGGAGGAAGC‑AATTGA‑ACGGGCGGCCCGCGC‑AGAACGGGC‑GGCA‑TTG‑AGGGCGGA‑AAAA‑C‑GCATCACC‑ATTACCGAGGGGGGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCgaagaa                                                                                                                      <  2:694495/239‑1 (MQ=255)

                                                                                                                      ttgcacgccacAGATCTCGACTTGTCCCCCCCGGC‑GGAAGTTC‑CCCCGGAGGAAGC‑CATGGC‑ACGGGCCGCCCGGGA‑AAAGAGGGC‑GGGT‑TTG‑CGGGCGGA‑CAAA‑C‑GCATCACC‑ACGAGCGAAGGTGGCTGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGaaaa                                                                                                                    <  2:737300/229‑1 (MQ=255)

                                                                                                                        tGACGCACCAGATCTCGACTTGTTCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGCCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATg                                                                                                                  <  1:1455253/239‑1 (MQ=255)

                                                                                                                        tGACGCACCAGATCTCGACTTGTCCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACGGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATg                                                                                                                  <  1:1644350/239‑1 (MQ=255)

                                                                                                                          gctgccgaGATCTCGATTTG‑‑CCACCCCGG‑CGAAGTTTCCCCCGGATGACGC‑ATTTAA‑ACGGGCGCCCCGCGC‑AGAACGGGC‑GACA‑TTG‑ACGGCGAA‑AAAA‑C‑CCATCACA‑ATTCCTGAGGGTGCCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGc                                                                                                                <  2:409995/231‑1 (MQ=255)

                                                                                                                           cGCACCAGATATCGACTTGTTCCCCCCGGC‑GGAAGTTC‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACA‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCg                                                                                                               <  1:2030243/239‑1 (MQ=255)

                                                                                                                            cggccacgtctcGACCTGTTCCCCCCCGCAGGAGGTTC‑CGCGGGATCAAGC‑CATAGA‑ACGGGCGGCCCGGGA‑AGAAGGGGG‑GGCT‑TTG‑CAGG‑GAA‑AAAA‑CGGCACCACA‑AATACCGAAGGGGGCA‑CTTTAACCAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGc                                                                                                                <  2:170996/230‑1 (MQ=255)

                                                                                                                              aCCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCCGCTTTAA‑CAGCCACTAC‑GGGGTCAA‑AGGTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCCCCAGCTGTGTAATGGCCGAAGAAAATGGCGaca                                                                                                            >  2:308971/1‑237 (MQ=255)

                                                                                                                                cAGATCTCGACTTGTCCCACCCTGC‑GGAAGTTT‑CCCCGGAGGAAGC‑CATTGA‑ACGGGCGGCCCGCGC‑AGAACAGGG‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATg                                                                                                          <  1:167961/239‑1 (MQ=255)

                                                                                                                                  gATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTAAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGa                                                                                                        >  1:1348499/1‑239 (MQ=255)

                                                                                                                                     ttctctttGTGCCCCCCTGG‑AGGAGTTT‑CCCGGGGAGAAGCTCGTTGA‑GCTGCGGCCCCGCGG‑AGAAGGGGG‑GGTA‑TGG‑GGGGGGGA‑CAAA‑C‑CCGTCCCA‑AATCCGGAGGGTGGGATCTTAAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGc                                                                                                      <  2:1756499/233‑1 (MQ=255)

                                                                                                                                        gACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGa                                                                                                  >  1:113731/1‑239 (MQ=255)

                                                                                                                                          ctggtcccccccTCC‑GGAAGTCC‑CCCCGGAGGAACC‑CATAAA‑CCGGGCGGCCCGCGC‑AGAACAGGG‑GGAA‑TTG‑CAGGCGAA‑CAAC‑C‑GCACCACC‑AATACCGAGGGTGGCATTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGAt                                                                                                 <  2:260561/229‑1 (MQ=255)

                                                                                                                                          cTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGAtt                                                                                                >  1:778269/1‑239 (MQ=255)

                                                                                                                                          cTTGTCCCCCCCTGC‑GGAATTTT‑CCCCGGATGAAGC‑CATTGA‑CCGGGCCGCCCGCGC‑GAAAGGGGG‑GGGT‑TTG‑GAGGCGAA‑CAAC‑C‑GCTTCCCA‑AATCACGAGGGTGGCATGTTAAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGAt                                                                                                 <  2:734746/238‑1 (MQ=255)

                                                                                                                                            tGTCCCCCCCTGG‑GGAATTTT‑CCCCGGAGGAAGC‑CTTTGA‑ACGGGCGGCCCCCGA‑AGAACGGGC‑GGCA‑TTG‑CAGGCGAA‑AAAA‑C‑GATTCCCC‑AATACCGAAGGGGGCAGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTAc                                                                                              <  1:1309455/239‑1 (MQ=255)

                                                                                                                                            tGTCCCCCCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAGGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTAc                                                                                              <  1:1426457/239‑1 (MQ=255)

                                                                                                                                             gTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCAtt                                                                                                                                                   <  1:789189/185‑1 (MQ=255)

                                                                                                                                               tCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCCTGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAg                                                                                                                                         >  1:1909020/1‑193 (MQ=255)

                                                                                                                                                ccgccgtGC‑GGCAGTTC‑CCCCGGATGAAGC‑AATAGA‑CCGGGCGGCCCGCGC‑AGAACGGGC‑GGCA‑TGG‑CAGGCGGA‑CAAG‑C‑GCATCACA‑AATCCCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCt                                                                                          <  2:60278/233‑1 (MQ=255)

                                                                                                                                                 cccccgggaggAAGTGC‑CCCCGGAGGACGA‑CATTGA‑GCTGGCGGCCCGCGC‑AGAGCAGGG‑GGCA‑TTG‑AAGGCGGA‑CAAA‑C‑GCATCACA‑AATACGGAGGGGGGCAGTTTAAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCt                                                                                          <  2:819345/230‑1 (MQ=255)

                                                                                                                                                 cACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑CCTGGCGCCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTa                                                                                         <  1:237160/239‑1 (MQ=255)

                                                                                                                                                 cACCCTGC‑AGAATTTG‑CCCGGGATGACGA‑CATTAA‑ACGGGCGGCCGCCGA‑GGAACGGGC‑GGCA‑TTA‑CAGGCGGA‑CACA‑C‑GCATCACC‑AATACCGAAGTGGACGGCTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTa                                                                                         <  2:633147/239‑1 (MQ=255)

                                                                                                                                                   cccTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTCC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTGGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTatcacgaa                                                                                        >  2:1182841/1‑231 (MQ=255)

                                                                                                                                                   cccTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCaa‑a                                                                                                                                                                                                       >  1:1735214/1‑127 (MQ=255)

                                                                                                                                                   cccTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTac                                                                                        >  1:901125/1‑238 (MQ=255)

                                                                                                                                                      tGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGCGTCAA‑AGTTTTTGGCAACAGCCACGGCAAGTTGCAGGGTTACTGCTCAACCCCTCTTTCGCTCTCCCGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGCTTACGCCCACCCCa                                                                                    >  2:22615/1‑239 (MQ=255)

                                                                                                                                                       gC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCAt                                                                                   >  1:416977/1‑239 (MQ=255)

                                                                                                                                                        c‑GGAAGTTT‑CCCCGGATGAAGC‑CATGGA‑ACGGGCGGCCCGCGA‑AGAACGGGC‑GGCA‑TCG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AAGCCCGAGGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCAt                                                                                   <  1:1182841/238‑1 (MQ=255)

                                                                                                                                                          cagaGTTTCCCCCGGAGGAGGC‑CATGGA‑CCGGGCGGCCCGCGA‑AGAACGGGC‑GGAT‑TGG‑CGGGCGAA‑AAAA‑C‑GCATCCCA‑ATTACGGAAGGGGGCAGCTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCAt                                                                                   <  2:2110147/235‑1 (MQ=255)

                                                                                                                                                             aGTTT‑‑CCCGGGTGGAGG‑CATTGACACGGGCGGCCCGCGG‑AGAGCGGGG‑GGAA‑TGG‑AAGGGGGC‑AAAA‑G‑CCATCACC‑ATCCCCGAAGGAGGGATCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGt                                                                               <  2:961941/238‑1 (MQ=255)

                                                                                                                                                                  cccccGGAGAAACC‑CATGAA‑ACGGGCGGCCCGCGA‑AGAACAGGC‑GGCA‑TTG‑CAGCGGGA‑AAAA‑C‑GCATCACC‑AATACGGAAGGGGGCAGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGc                                                                          <  1:1095624/238‑1 (MQ=255)

                                                                                                                                                                                     taaacctggggcCCGGGA‑AGAACAGGC‑GGCA‑GTG‑CAGGCGCA‑CAAC‑G‑GCAACAGC‑AAGACCGAGGGGGCCAGTTTTAC‑CAGCCTCTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCaaa                                                         <  2:416977/230‑1 (MQ=255)

                                                                                                                                                                                         cgggcgggCCGCGCGAGAGGGGGC‑AGCA‑TGG‑CAGGGGAA‑CAAA‑C‑GAATCACC‑AATACGGAAGGAGGCAGTTTACA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACg                                                       <  2:778269/236‑1 (MQ=255)

                                                                                                                                                                                         cTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAAcccc                                                     >  2:1998489/1‑239 (MQ=255)

                                                                                                                                                                                            gcggcCCGCGC‑AGAACAGGC‑GACA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCt                                                                                          <  1:1558106/199‑1 (MQ=255)

                                                                                                                                                                                            gcggcCCGCCA‑AGACGAGGC‑GGAT‑TTG‑CAGGCGAA‑CAAC‑C‑CAATCCAC‑AATACCGAAGGTGGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCag                                                   <  2:1629024/238‑1 (MQ=255)

                                                                                                                                                                                             cggcCCGCGC‑A‑AACCGGCGGGCA‑TTG‑CGGGGGAA‑CAAC‑C‑TCATCACA‑AATCCGGAAGTTGG‑ACTTTTAACCAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCaga                                                  <  2:901125/238‑1 (MQ=255)

                                                                                                                                                                                              gccccGCGC‑AGAACGGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATCCCGAGGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCagag                                                 <  1:384545/236‑1 (MQ=255)

                                                                                                                                                                                              gccccGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCCCC‑AATACCGAAGGTTGCAGTTTTAC‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCagag                                                 <  1:1815833/236‑1 (MQ=255)

                                                                                                                                                                                                 ccGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTggg                                             >  1:1199351/1‑239 (MQ=255)

                                                                                                                                                                                                        aGAACAGGC‑GGCT‑TTG‑CAGGGGGA‑CAAA‑C‑GCATCCCC‑AATACCAAAGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTggg                                        <  1:1583530/238‑1 (MQ=255)

                                                                                                                                                                                                                      tttG‑CAGGCGGA‑CAAA‑C‑GCATCACA‑AATCCCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCt                            <  1:1473938/237‑1 (MQ=255)

                                                                                                                                                                                                                      tttG‑CAGGCGAA‑AAAA‑C‑GCATCCCC‑AATACGGAGGTTGGCAGCTTTCC‑CAGCCCCTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCt                            <  1:1894234/237‑1 (MQ=255)

                                                                                                                                                                                                                       tgg‑CAGGCGAA‑CAAA‑C‑GCACCACA‑AATACCGAGGGGGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCg                          <  1:159224/237‑1 (MQ=255)

                                                                                                                                                                                                                                ggA‑CAAA‑C‑GCATCACC‑AATACCGCAGGTGGCAGCTCTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACtt                  >  2:557336/1‑239 (MQ=255)

                                                                                                                                                                                                                                ggA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGc                         >  1:2011261/1‑232 (MQ=255)

                                                                                                                                                                                                                                       aaacgatgcccc‑AATTCCGACGGTGGCAGCTTGCA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATTAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATc              <  1:1711271/229‑1 (MQ=255)

                                                                                                                                                                                                                                                cac‑AATACCGAAGGTGGACTTTTTAA‑CAGCCGCTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTc     <  1:1271207/237‑1 (MQ=255)

                                                                                                                                                                                                                                                 acaaaTACCGAGGGGGGCAGTTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTc     <  1:1512769/236‑1 (MQ=255)

CATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGT‑TATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGA‑CAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGC‑GGAAGTTT‑CCCCGGATGAAGC‑CATTGA‑ACTGGCGGCCCGCGC‑AGAACAGGC‑GGCA‑TTG‑CAGGCGGA‑CAAA‑C‑GCATCACC‑AATACCGAAGGTGGCAGCTTTAA‑CAGCCACTAC‑GGTGTCAA‑AGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTCACC  >  NC_007779/4462877‑4463345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`