| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 884,611 | A→G | 20.4% | M173V (ATG→GTG) | mdfA → | multidrug efflux MFS transporter MdfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 884,611 | 0 | A | G | 20.4% | 172.1 / 8.4 | 99 | M173V (ATG→GTG) | mdfA | multidrug efflux MFS transporter MdfA |
| Reads supporting (aligned to +/- strand): ref base A (39/30); new base G (17/3); total (57/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.35e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
ACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGC > NC_007779/884377‑884845 | aCCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGGATCAAGATCACCGCGCTGATTGCGAACGTGGAGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGGG‑TGGA‑TCCATGTGCTGCCCTGGGGGGGGAtgtt > 1:962930/1‑239 (MQ=255) ccTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCCAAATTACCGCGCTGATGGCGTACGTGGCGCTGATTTCTCCGCTACTTAGTCCGCTGGTGGGCGCGGCG‑TGGG‑TCCCTGGGCCGGCCCGGGGGGGGagtttt > 2:457407/1‑234 (MQ=255) ccTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCCCCGCTACTTGGTCCGCCGGTGGGCGCGGCG‑GGGG‑TCCCTGTGCTGCCCGGGGGGGGGGtggtt > 2:154171/1‑239 (MQ=255) tCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCCGATTGCTCCGCTACTTGGTCCCCTGGTGGGCGCGGCG‑GGGA‑TTCATGTGCCGCCCTGGGGGGGGATgtttg‑gtt > 1:629859/1‑239 (MQ=255) tCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAACACCGCGCTGAAGGCGAAAGAGGCGCTGATTGCTCCGCTACTTTGTCCCCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCCGGGAGGGGATggttg‑ttt > 1:1553334/1‑239 (MQ=255) cAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTTTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGAGTGCTCCGCTACTTGGTCCGCTGGGGGGGGCGGCG‑TGGT‑TCCATGGGCTGTCCTGGGAGGGGATGGTtg‑ttttgttt > 1:1208165/1‑239 (MQ=255) aaTATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTtg‑ttttgttt > 1:177521/1‑238 (MQ=255) ttGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGGGAACGTGGGGCTGATTGATCCGCTACTTTGTCCCCTGGGGGGCGCGGCG‑GGGG‑TCCCTGTGCTGCCCTGGGAGGGGGGGGTTGTTTTTGTTTGcgc > 2:70984/1‑237 (MQ=255) tGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGGTTGAATCCAAAACACCGCCCTTATGGCGAACGTGGCACCGATTTCTCCGCCATTTGGGGCGGTAGGGGGCGGGGCG‑GGGG‑ACCCTGTACCGCCGTACGAGGGGAGTTTTG‑TTTTTTGTGTCGccgtg > 2:1355802/1‑235 (MQ=255) gcAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGGGGGGGTGTTTG‑TTTTGTTTGCCGCA‑TTGGGAg > 1:204019/1‑239 (MQ=255) aaCATTTAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAt < 2:322490/239‑1 (MQ=255) aCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAtc < 1:1385728/239‑1 (MQ=255) aCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAtc < 1:70984/239‑1 (MQ=255) aCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAtc < 1:1982850/239‑1 (MQ=255) aaCAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGGGGGGCTGTTTG‑TTTTGTTTGCCGCA‑TTGGCTGCGGTCACCttt > 1:1919716/1‑239 (MQ=255) cAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCttttt < 1:1575405/239‑1 (MQ=255) aaTTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTTCCGCA‑TTGGCAGCGATCTCCTTTTTc > 1:193907/1‑239 (MQ=255) ttCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGGGCTGATTGCTCCGCTTATTGGTCCGCTGGGGGGCGGGGCG‑TGGG‑TGCATGGGCGGCCCTGGGAGGGGGTGTTTG‑TTTTTTTTTCCGCA‑CTGGCAGGGATCCCCTTTTTCgg > 2:1335959/1‑239 (MQ=255) ttCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTTCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGG‑TCCATGTGCTGCCCTGGGGGGGGGTGTTTG‑GTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCgg > 1:2102759/1‑239 (MQ=255) ttCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCgg > 1:1664564/1‑239 (MQ=255) tCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGt < 1:756658/239‑1 (MQ=255) cccTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGt < 1:556555/236‑1 (MQ=255) ccTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGGTCTCCTTTTTCGGTC‑TGc > 1:520674/1‑239 (MQ=255) ccTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAtc > 1:521960/1‑223 (MQ=255) ccTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGAGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAtc < 2:521960/223‑1 (MQ=255) tGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCaa < 1:1335959/239‑1 (MQ=255) gTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAAc < 2:177521/239‑1 (MQ=255) tGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTTTATCAAGAACACCGCGCTGATGGCGAACGTGGCGCTGGTTGCTCCGCTACTTGGTCCGCCGGGGGGCGCGGCG‑TGGG‑GCCATGGTCTGCCCGGGGGGGGGGTGTTTG‑TTTTGTTTGCCGCG‑TTGGCAGCGGTCCCCTTTTTCGGTT‑TGCAAGGa > 2:530208/1‑239 (MQ=255) tGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGAGGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGa > 1:652145/1‑239 (MQ=255) tGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑GGGA‑TCCATGTGCTGCCCTGGGGGGGGGTGTTTG‑TTTTGTTTGCCGCC‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGa > 1:1942515/1‑239 (MQ=255) cttcttGCAGGGCATAAGCCTCTGTTTCATTGGCGTTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCCGATTGCTCCGCTACTTTGTCCGCTGGTGGGCGCGGCG‑TGGG‑TCCATGTGCTGGCCTGGGAGGGGGTGTTTG‑TTTTGTTTGCCGCC‑TTGGCAGGCGTCTCCTTTTTCGGGG‑TGCAAagag > 2:556555/1‑236 (MQ=255) cttcttGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑GGGA‑TCCATGTGCTGCCCTGGGCGGGGGTGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGGTCTCCTTTTTCGGGC‑TGCAATGGGCCa > 2:466419/1‑239 (MQ=255) cttGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAtc > 1:65254/1‑211 (MQ=255) cttGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGAtc < 2:65254/211‑1 (MQ=255) gggCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTTTATCAAAGTTACCGCCCTGGTGGCGAACGGGGCGCTGATTGCTCCGCCACTTGGTCCGCTGGTGGGCGCGGCG‑GGGC‑TCCCGTGGCTGCCCTGGGGGGGGGTGTTTG‑TTTTGTTGGGCGCC‑TTGGCAGGGGTCTCCTTTTTCGGGT‑TGCAACGCGCCATGCCTgga > 2:1366392/1‑236 (MQ=255) acccTTTGTTTCATTGGCGCTGTGGGATACCCCGCAATTCAGAAACCCTTCGAAGAGGCGGTTTGTATAAAGTTCCCCGCGCTGAGGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGGGGCG‑TGGT‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTGGGTC‑TGCAACGAGCCATGCCTGAAACCGCCAc < 2:629859/237‑1 (MQ=255) tctGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTTTATCAAGATCACCGCGCTGATGGCGAACGTGGCGGTGATTTCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑GGGA‑TCCATGTGCTGCCCTGGGGGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTTGCAGCGATCTCCTTTTTTGGTC‑TGGAACGCGCCATCGCTGTAACCGCCAcgcgg > 2:1491068/1‑238 (MQ=255) tctGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCC‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGt > 1:850720/1‑239 (MQ=255) tGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACCTGGTCCGCTGGTGGGGGCGGCG‑TGGG‑TCCATGTGCTGCCCCGGGGGGGGATGTTTG‑TTTTGTTTGTCGCA‑TTGGCAGCGATCTCCTTTTTCGGGC‑TGCAACGCGGCATGCCTGAAAACGCCACGCGtac > 2:1861323/1‑238 (MQ=255) tttCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGa < 1:1769728/158‑1 (MQ=255) cATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTTGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCg > 1:1887716/1‑239 (MQ=255) ttgggggtggtgGGATCCCCCCCAATTAGGGAATCCTTCAAGGGGGCGGTTTGTATAAAGATCCCCGGGCGGTGGGGGAACGGGGCCCTGTTTGCTCCGCTACTTGGCCCGCTGTGGGGGGGGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGTTTTTTG‑TTTTGTTTGCCGCA‑TGGGCAGCGATCTCCTTTTTCGGTC‑TGCACCGAGCCATGCCTGAAACCGCCACGCGTATAGGCg < 2:652145/229‑1 (MQ=255) ttGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGGTTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCCTGTGCTGCCCTGGGGGGGGATGTTTG‑TTTTGTTTGCCGCA‑CTGGCAGCGATCTCCTTTTTCGGTC‑TGCAAAGAGCCATTCCTCAAACCCCCACGCGTATAGGCggg > 2:127267/1‑237 (MQ=255) ttGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGGGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCggg > 1:40434/1‑237 (MQ=255) gcTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCCGATGGCGAACGCGGCGCCGATTGCTCCGCTATTTTGTCCGCTGGTGGGCGCCGCG‑TGGA‑TACATTTGCTGCCCTGGGAGGGGGTGGTTG‑TTTTGGTTTGCGCC‑TTGGCACCGGTCCCCTTTTTTGGTC‑TGCAACGAGCCATTCCCGAAACCGCCCCGCGTATACGCGGGAAACt > 2:1375335/1‑239 (MQ=255) gcTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGGATCAAGATCACCGCGCTGGAGGCAAACGTGGCGCTGATTGCTCCGCTAATTGGACCGCTGGTGGGCGCGGCG‑TGGG‑GCCATTTGGTGCCCCGGGAGGGGGTGTTTG‑GTTTGTTTGGCGGA‑TGGGGAGGGATCCGCTGTTGCGGGC‑TTCTAAGTGCCTATCCTGGAACCCACACGCGtcaaagacggaa > 2:617251/1‑225 (MQ=255) gtgGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTc < 1:1491068/239‑1 (MQ=255) tACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGGGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGGC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGaa > 1:29510/1‑239 (MQ=255) gccgcAATTCAGGAATCCTTCGAAGAGGCGGTTTGTCCCAACGTCACCCCGCCGGTGGCGAACGTGGCGCTGGTTGCTCCGCTACTTAGTCCCCCGGTGGGCGCGGCG‑TGGA‑TCCATTTGCGGCCCTGGTAGGGGGTGGTTG‑TTTTGTTTGCCGCA‑TTGGGAGCGTTCTCCTTTTTTGGGC‑TGCAACGAGGCATTCCTGAAACCCCCCCCCGTATATGGGCGCAACTgctcccggaatg > 2:1359628/1‑228 (MQ=255) gcAATTCGGGAATCCTTCGACGAGTCGGGTTGTATCTAGACCCCCGGGCGGGTGGGGAGCGTGCGGCTGATTGCTCGGCTATTGGGTCGGCTGGTGGTTGGGGCG‑GGGA‑TCCGTGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑CTGGCGGCGTTCTATTTTTCCGGGC‑TGCGCTGCGCCATGCCTTAAGCCGCCACGCGTCTAGGCGAGAAACTGTCACTGAAAGAACt < 2:149472/239‑1 (MQ=255) cAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCCCCGCGCCGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑GGGA‑GCCATGTGCTGCCCCGGGGGGGGGTGTTTG‑TTTTGGTTGCCGCA‑TTGGCAGCGGTCTCCTTTTTCGGTC‑TGCAACGAGCCATGGCCGAAACCCCCACCCGCATAAGGGAGAAACCGTTCCTGAAAAAAcc > 2:1585092/1‑237 (MQ=255) ggatcccTACGAGGGGGCGTTTGGTATCAAGATCCCCGCGTGGAGGGGGACGGTGGGGTTGTTTGTTCCGCTGTTTGGTCGTCGGGTGGGCGCGGCG‑TGGA‑GCAATGTGCTTCCCTGGGAGGGGATGTTTT‑TTTTGTTTGCCGCA‑TTGGCGGCGTTCTCCTTTTTCGTTC‑TGCAGCGAGCCATGCCTGAAGCCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGt < 2:1696550/233‑1 (MQ=255) gAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGGTTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGGTGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTg > 1:454363/1‑238 (MQ=255) aaTCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCGGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGt < 1:127267/236‑1 (MQ=255) cTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGGTGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGGCGTGACtata > 1:1511528/1‑239 (MQ=255) cGAAGAGGCGGTTTGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGc < 1:1375335/239‑1 (MQ=255) gCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGGGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGt > 1:843032/1‑236 (MQ=255) gCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGCGGCGCTGATTTCTCCGCTCCTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGGTGGTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTTGGGC‑TGGCACGAGCCATGCCCGAAACCGCCACGCGCGTAGGCGAGAAAATTTCACTGAAAAAAAACGGGTGTGACCGTAAgagggg > 2:2192413/1‑231 (MQ=255) gCGGTTTGTATCAAGATCACCGCGCTGAAGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCCCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGt > 1:720276/1‑153 (MQ=255) aaaaaGCTCGCCGCGCTGAGGGGGACCGGGGGGTGGTTTGCTCCGCTGGTTGGTCGGTTGGGGGGGGGGGGG‑GGGA‑TCCATGTGCTGCCCGGGGGGGGGTGTTTTG‑TTTTTTTGCCCGCT‑TTGGACGCGACCTCTTTTTTCGGTC‑GCCAACGAGCATTGCTGGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACgg < 2:193907/236‑1 (MQ=255) aGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGcc > 1:2178534/1‑237 (MQ=255) aCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGCAGAACGGCCGCTTtgt > 1:1740260/1‑239 (MQ=255) aCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTtgt > 2:1442380/1‑239 (MQ=255) aCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGCGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCCGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGCGACTATAAGCTGGCGCTGAAGACCGGCCGCTTtgt > 1:1833298/1‑239 (MQ=255) cgcgCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGCACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTgg > 2:2187952/1‑239 (MQ=255) cgcgCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTgg > 1:1879584/1‑239 (MQ=255) cgcgCTGATGGCGAACGAGGCGCTGATTGCTCCGCTACTTGGCCCGCTGGTGGGCGCGTCG‑TGGC‑CCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TATTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCATCGTGCCATGCCGGCAACCGCCCCGCGCATAGGCGAGAAACTGTCCCTGAACGAACTCGGTCGTGACTCTAAGCCGGTGCTGAAGACCGCTAGCTTTGCgg > 2:1057855/1‑239 (MQ=255) cgcTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCg > 1:2150039/1‑239 (MQ=255) cgcTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCg > 1:795641/1‑239 (MQ=255) cTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGa > 2:2021727/1‑85 (MQ=255) cTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGa < 1:2021727/85‑1 (MQ=255) cTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGCGACTATAAGCTGGTGCTGAAGAAAGGCCGTCTTGTGGTggg > 2:51946/1‑239 (MQ=255) tGAGGGGGAACGTGGCGCTGATTGCTCCGCTCCTTGGTCCGCTGGTGGGCGCGGCG‑TGGT‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGTTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCggg < 1:154171/238‑1 (MQ=255) aTGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGt > 2:63658/1‑195 (MQ=255) aTGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGt < 1:63658/195‑1 (MQ=255) aaCGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCCTTGTGGCgggggggggggg > 2:1525557/1‑232 (MQ=255) cGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCggggggggctgtg > 2:1046031/1‑230 (MQ=255) tGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCgggggggggggggggg > 2:1779277/1‑228 (MQ=255) tGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCgggggggggggggccg > 1:1109071/1‑228 (MQ=255) cgcTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCAGGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTggg < 1:2192413/238‑1 (MQ=255) tgttggccccGCTATTTGGTCGGTTGGTGGGCGCGGCT‑TGGA‑TCCTTGTGCTGCCCTGGGAGGGGTTGTTTG‑TTTTGTTTGCCGCA‑TTGGCACCGATCTCCTTTTTGGTTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGAtt < 1:466419/230‑1 (MQ=255) tgtctcGCTAGTGGGGCCGCGGGGGGGGGCGGGG‑TGGA‑TCCGGGTGCGGCCTGGGGGGGGGTTGTTTG‑TTTTGTTTGCCGCT‑TTGGCAGCGTTCTCTTTTTGCGGTC‑TGCACGGAGCCATGCGTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTa < 2:204019/234‑1 (MQ=255) cccgtgttgtGGTCCGC‑GGTGGGGGGGGGG‑TGGG‑ACTCAGTGCTGGCCTGGGGGGGGGTGTTTT‑GTTTGTTTGCCGCATTTGGCGGCG‑TCCTCTTTTTCGGGCGTGAAAGGGGCAATGCCTGAACCCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGt < 2:441471/229‑1 (MQ=255) ttggtgggttggtggGGGCGGC‑‑TGGATTCCTTGTGTGGCCTTGGGTGGGGTTGTTTG‑TTTTGTTTCCCGCT‑TTGGCCGCGATCTCTTTTCTCGGGC‑TGCAGCGAGCTATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGAGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTg < 2:520674/230‑1 (MQ=255) ttGTTCCGTTGGTGGGCGGGGCG‑TGGT‑TCCATGTGTGGCCCTGGGAGGGGTTGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTg < 1:126905/239‑1 (MQ=255) ttGGTCCGTTGG‑GGGGGGGGCGTTGGG‑TCAAGGTGCTGCCCTGGGGGGGGTTTTTTG‑TTTTTTTTGCCGCT‑TTGGCAGCGATCTCCTTTTTCGGTC‑GGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTg < 2:1664564/239‑1 (MQ=255) tgggTCCGTTGGTGGGCGCGGCG‑GGGT‑TCCTTGTGCTGCCTTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCTTTTTTCGTTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTg < 1:1793027/237‑1 (MQ=255) tCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTg < 1:1932081/172‑1 (MQ=255) tgaatcctggtgCTGCCCTGGGAGGGGAGTTTTG‑TTTTGTTTGCCGCA‑TGGGCAGCGACCTCTTTTTTCGTTC‑GGTAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGc < 1:1359628/229‑1 (MQ=255) tCCTTGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGGGATCTCTTTTTCCGGTC‑GGCAACGAGCCATGCCTGAACCCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGAtt < 1:1861323/239‑1 (MQ=255) tCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGAtt < 1:1585092/239‑1 (MQ=255) tgtgCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAg > 1:425998/1‑101 (MQ=255) tgcCCTGGGGGGGAATGTTTG‑TTTTGTTTCCCGCA‑TTGGCAGCGATCTCCTTTTTGGGTC‑TGCAACGAGCCATGCTTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATcatcat < 1:1366392/238‑1 (MQ=255) cTGGGGGGGGATTTTTG‑TTTTTTTTGCCGCA‑TTGACAGGGTTCTCCTTTTTCGGTC‑TGCAACGAGCCAGGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCg < 1:523599/239‑1 (MQ=255) cTGGGAGGGGTTGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCg < 1:1668644/239‑1 (MQ=255) ggtggggGTGTTTG‑TTTTTTGTCCCGCT‑TGGGCAGCGATCTCCTTTTCCGGTC‑TGCAAGGGGCCATGCCTGAAACCGCCACGCGTATAGGCGATAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGc < 1:1325146/235‑1 (MQ=255) ggAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCggggggg > 2:354610/1‑164 (MQ=255) ggAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGggcg < 1:354610/166‑1 (MQ=255) ggggggGTTTTTG‑TTTTGTTTGCCGCT‑TTGGCGGGGCTCTCCTTTTTCGGTC‑TGAAACGGGCCAGGACTGAACCCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCg < 2:2178534/236‑1 (MQ=255) gggTTGTTTG‑TTTTTTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCACCGAGCCAGGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGc < 1:617251/238‑1 (MQ=255) | ACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCG‑TGGA‑TCCATGTGCTGCCCTGGGAGGGGATGTTTG‑TTTTGTTTGCCGCA‑TTGGCAGCGATCTCCTTTTTCGGTC‑TGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGC > NC_007779/884377‑884845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |