BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	954,805	C→T	13.6%	T28T (ACG→ACA)	focA ←	formate transporter FocA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	954,805	0	C	T	13.6%	243.9 / 11.0	122	T28T (ACG→ACA)	focA	formate transporter FocA
Reads supporting (aligned to +/- strand): ref base C (63/37); new base T (6/10); total (70/52)
Fisher's exact test for biased strand distribution p-value = 6.13e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 122 total aligned reads displayed.

CCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGA  >  NC_007779/954568‑955027

ccAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  1:95162/239‑1 (MQ=255)

ccAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  2:1561252/239‑1 (MQ=255)

ccAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCAG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  1:1467958/239‑1 (MQ=255)

ccAGGTGATGAGCCCACTCGCCTTAGCAACAACAGTCAACACTGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTGTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  2:878198/239‑1 (MQ=255)

ccAGGAGATGCGCCCAGTCGGCTTAGCAACAACAAACAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCTAACCAGTTTTGCCAGGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGGCG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  2:827076/239‑1 (MQ=255)

 cAGGTGATGCGCCGACTCGCCATCGCAACAACAATCAACATGGTGGAAGTAAAGAGATCGGCTCCGCAGACAGCACAAAGAATCAGCGCAAGAGAGAAGCAAAGGCCGCCAACCAGTTTTGGCATGCTGGAGGACA‑TA‑TTGCCTG‑TGCCA‑GTGGTTGATGTG‑ATATAGAAGACG‑AATGCGATTGAGATTAAAACACC‑GG‑CCGTAAT‑CGGCAGATTGAAAGTC‑TT‑AA‑GCGTAAGTTA‑CGt                                                                                                                                                                                                                              <  2:1787879/239‑1 (MQ=255)

 cAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGt                                                                                                                                                                                                                              <  1:531359/239‑1 (MQ=255)

 cAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGt                                                                                                                                                                                                                              <  2:2098116/239‑1 (MQ=255)

    gTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGtt                                                                                                                                                                                                                             >  1:2182834/1‑237 (MQ=255)

        tGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGGC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTta                                                                                                                                                                                                                       >  1:1545200/1‑239 (MQ=255)

         gcgcCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGAC‑TT‑AA‑ACGGATGTTT‑CGTTGCTTtat                                                                                                                                                                                                                      >  1:1929962/1‑239 (MQ=255)

         gcgcCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGGAAT‑CGCCAGATAGAAAGGC‑TT‑AA‑GCGGATGGTT‑CGTTGCTTtat                                                                                                                                                                                                                      >  1:740222/1‑239 (MQ=255)

            cccACTCGCCTTAGCAACAACAATCAACACGGCGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTT‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAg                                                                                                                                                                                                                    >  1:1654719/1‑238 (MQ=255)

                       tAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CTCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTTTAAACAACCGCctct                                                                                                                                                                                                        >  1:62808/1‑239 (MQ=255)

                       tAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGGC‑CT‑AA‑GCGGGTGGTT‑CGTTGCTTTATAGACACCCGCctct                                                                                                                                                                                                        >  1:415760/1‑239 (MQ=255)

                       tAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGGTAT‑CGCCAAATAGAAAAGC‑TT‑AA‑GAGGATGTTT‑TGGTGCTTTTTAGCAACCCCCccct                                                                                                                                                                                                        >  2:703498/1‑239 (MQ=255)

                         gCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGGAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCtt                                                                                                                                                                                                       >  1:1651132/1‑238 (MQ=255)

                           aacaacaaTCAACACGGTGGAAGTAAAGAGATCGGTTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGGAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGGTGTTT‑CGTTGCTTTATAGACACCCGCCCCTTCg                                                                                                                                                                                                     >  2:501548/1‑238 (MQ=255)

                             caacaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGCAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCCGATGTTT‑CGTTGCTCTATAGACACCCCCccctcccgc                                                                                                                                                                                                   >  1:226257/1‑233 (MQ=255)

                                   tCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  2:253164/204‑1 (MQ=255)

                                   tCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACtttt                                                                                                                                                                                            >  1:1778340/1‑238 (MQ=255)

                                       cacGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  2:339800/200‑1 (MQ=255)

                                       cacGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               >  1:339800/1‑200 (MQ=255)

                                        acGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CCCCCGAAAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACAACCGCCTCTTCGGCCACTTTGGCCAt                                                                                                                                                                                       >  1:1550347/1‑239 (MQ=255)

                                          ggTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAATC‑TT‑AA‑GCGGATGTTT‑CGTTGGTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCAtt                                                                                                                                                                                      >  1:921189/1‑238 (MQ=255)

                                            tGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGAAGTTT‑TGTTGCTTTATAGACAACCCCCCCTTCGGGCAACTTGGCCCtttg                                                                                                                                                                                    >  2:230955/1‑236 (MQ=255)

                                               aaGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGAC‑TT‑AA‑GAGGAAGGTT‑CGGTGCTTTATAGACACCCGCCTCTTCGGCCCCTTTGGCCATTgcaaca                                                                                                                                                                                >  1:225662/1‑239 (MQ=255)

                                                        gcgcGGCCCCGCACAAAAAACAAAAAACCGGCCCCAGAGAAAAG‑AAAGGCCCCCAACCCGGTTTTCCAAGGCCGAGGGCATTT‑GTGCCTG‑GGCCA‑GGGGTTGTTGGA‑AAATAAAAAACG‑AATGTGATTGAAAAGAAAACCCC‑GG‑C‑GTAAC‑CCCCAGAAAAAAAATCTTT‑GA‑GGGGATTTTT‑CGTTGCTATAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaa                                                                                                                                                                        <  2:1551781/235‑1 (MQ=255)

                                                         aTCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑TGCCAGATAGAACGTC‑TT‑AA‑GAGGATGTTT‑CGTTGTTTTTTAGACACCCGCCCCCTCGGCCAACTTGGCCATTGCAGCAGGGAGTaaaa                                                                                                                                                                      >  1:342084/1‑239 (MQ=255)

                                                         aTCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                                      >  1:1771233/1‑239 (MQ=255)

                                                         aTCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCCCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                                      >  1:1354176/1‑239 (MQ=255)

                                                         aTCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAAAAAGTC‑TT‑AA‑GCGGAGGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                                      >  1:1086069/1‑239 (MQ=255)

                                                         aTCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑AGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCCCTTCGGCCACTTTGGCCATTGCATCAGGAAGTaaaa                                                                                                                                                                      >  2:1605443/1‑239 (MQ=255)

                                                         aTCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGGAAT‑CGCCAGATAGAAAGGC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                                      >  1:475238/1‑239 (MQ=255)

                                                           cGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAAGC‑TT‑AA‑GCGGATGGTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGa                                                                                                                                                                    >  1:953187/1‑239 (MQ=255)

                                                           cGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CCCCAGGAAGAAAATC‑CT‑TA‑GCGGGTTTTT‑CCTTGCTTTATAGGCACCCGTCCCTTCGCTCACTTTGTCCATTTCCACATGAAGGaaaaaa                                                                                                                                                                    >  2:618718/1‑237 (MQ=255)

                                                            ggCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGAGAGAAAATC‑TT‑AA‑GCGGATGTTT‑TGTTGCTTTATATACACCCCCCTCTCCCGGCACTTTGGCCCTTGCCGCCGGAAGTaaaaaa                                                                                                                                                                    >  2:816349/1‑236 (MQ=255)

                                                                   cAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGGTGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCCGCCACTTTGGCCATTGCAGCAGGAAGTAAAAACTCAAAAgg                                                                                                                                                            >  1:1002559/1‑239 (MQ=255)

                                                                        aacaCAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGGC‑TT‑AA‑GCGGGTGTTT‑CGCTGCTTTATAAAAACCCGCCCCTTCGGCCACCTTGGCCATTGCCGCAGGAAGGAAAAGATCAAAAGGGTTg                                                                                                                                                        >  2:1633250/1‑238 (MQ=255)

                                                                             aaaGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTtat                                                                                                                                                                                                                      <  2:283159/171‑1 (MQ=255)

                                                                             aaaGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTtat                                                                                                                                                                                                                      >  1:283159/1‑171 (MQ=255)

                                                                                 aaTCAGCCCAAGAGAGAAGAAAATGCCGCCAACCATTTTTGCCATGCCGAGGTGTG‑TT‑GTGCCTG‑TGCCA‑TTGGTTGCTGTA‑ATATAGAAGACG‑AAGGCGATTGAAATAAAACCCCC‑GG‑CGGTAAT‑CGCAAAATAAAAAGTT‑TA‑AG‑GCGGTTGTTT‑CTTTGCTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTca                                                                                                                                              <  1:230955/239‑1 (MQ=255)

                                                                                  aTCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               >  1:569787/1‑157 (MQ=255)

                                                                                  aTCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTcac                                                                                                                                             >  1:401259/1‑239 (MQ=255)

                                                                                  aTCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGAAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑Cg                                                                                                                                                                                                                               <  2:569787/157‑1 (MQ=255)

                                                                                      gCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAAAAAGTC‑TT‑AA‑GCGGGAGATT‑CGTTGCTTTATAGACAACCGCCTCTTCGGCCACTTTGGGCATTGCAGCCGGAAGTGAAAAATCAAAAAGGGTGTCAGCTTTCACACTa                                                                                                                                         >  1:2163977/1‑239 (MQ=255)

                                                                                           agagagAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGGAAAAGATCAAAAGGGGTGTCAGCTTTCACACTAActc                                                                                                                                     >  1:1469938/1‑238 (MQ=255)

                                                                                           agagagAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTA‑TT‑AA‑GCGGATGTTT‑AGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTACAGCAGGAAGAAAAAGATCAAAAGGGTTGTAAGCTTTCACAATAActc                                                                                                                                     >  1:1270059/1‑238 (MQ=255)

                                                                                             ggagaAACAACTCCCGCCACCCATTTTGGCCATGCGGAGGGGCT‑TT‑GTGCCGG‑TGCCG‑GTGGTTGTTGTG‑TTAAAGAAGACG‑AAGGCATTGGAGATAAAACCACG‑GG‑CGGTACC‑CGCAAGATAGAAAGTT‑TA‑AA‑GGGGGTTTTT‑CGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAActctc                                                                                                                                   <  2:614333/237‑1 (MQ=255)

                                                                                             agagaAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGGC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAActctc                                                                                                                                   >  1:1315914/1‑238 (MQ=255)

                                                                                              gagaAGCAAATGCCCCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTA‑ATATAGAAGACG‑AATGCGATTGAGATAAAACCCCC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAActctc                                                                                                                                   <  1:961928/237‑1 (MQ=255)

                                                                                               agaAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTTACACTAActctctct                                                                                                                                >  1:1487393/1‑239 (MQ=255)

                                                                                                gaAGCAAAGGCCCCCAACCAGTTTTGCCAGGCCGAAGGGAA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGTTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACCCC‑GG‑CGGTAAT‑CGCCAGATAGAAATTC‑TT‑AA‑GCGGTTGTTT‑CGTTGCTTTATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTgcag                                                                                                                                                                                  <  1:1225478/188‑1 (MQ=255)

                                                                                                 aaGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAACATCAAAAGGGTTGTCAGCTTTCACACTAACTCCATCttt                                                                                                                              >  1:1126407/1‑239 (MQ=255)

                                                                                                 aaGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGGC‑TT‑AA‑GCGGATGTTT‑TGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACAATAACCTTCTCttt                                                                                                                              >  1:123795/1‑239 (MQ=255)

                                                                                                 aaGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGGC‑TT‑AA‑GCGGATGTTT‑CGGTGCTTTATAGACACCCGCCTCTTCGGCCACCTTGGGCATTGCAGCAGGAAGTAAAAGAACAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCttt                                                                                                                              >  1:1077850/1‑239 (MQ=255)

                                                                                                    cAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGAC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTTTAGACACCCGCCCCTTCGGCCACTTTGGCCCTTGCAGCAGGAAGTAAAAAAACAAAAGGGTTGTCAGCTTTCAACCTTACCCTCTCTttatt                                                                                                                           >  1:581271/1‑239 (MQ=255)

                                                                                                     aaaGGCCACCAACCAGTTTTGCCATGCGGAAGGTCA‑TT‑GTGCCTG‑TGCCG‑GTGGTTGGTTTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAGGTC‑TT‑AA‑GCGGTTGTTT‑CTTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTttatta                                                                                                                          <  1:816349/239‑1 (MQ=255)

                                                                                                       cttcccccAACAGGTTTGGCCGTGCCGAGGGTTA‑GT‑GAGCCTG‑TGCTG‑GGTGTGGCGTTT‑ATATAGAAGATG‑AATGAGGATGAGA‑GAAAACCCC‑GGTCGGAAAT‑CACCATGTAGAATCTT‑GA‑AA‑GGTTTTTTTT‑TGTTTTTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTACCTCTCTCTTTATTAAg                                                                                                                        <  2:2059780/233‑1 (MQ=255)

                                                                                                       aTGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGAAACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGGAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAg                                                                                                                        >  1:464319/1‑239 (MQ=255)

                                                                                                         gccgccAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGAC‑TT‑AA‑GCGGGTGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCCGCCACTTTGGACATTGCAGCCGGAAGGAAAAGATCAAAAGGGATGTCAGCTTTCACCCTAACTCCCTCTCTATTAAGTc                                                                                                                      >  1:1882603/1‑239 (MQ=255)

                                                                                                               accattttttGCGATGCCG‑AGGGGA‑TT‑GTGCCTG‑GGCCAGGTGGTTGGTGTA‑ATATAGAAGAGA‑AGTGCGATTGAGATAAAACCACC‑GG‑GGTTACT‑CGCAAGATAAAAAGTT‑AT‑AA‑GCGTATTTTT‑TGTTTTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGcgac                                                                                                                <  2:2182834/233‑1 (MQ=255)

                                                                                                                          ccATGCCGAAGGGTA‑‑T‑GTGGCTGCTGCGT‑GGGGTTGGTGTG‑ATATAGAAGACA‑AATGCGATTGAGAAGAAACCACC‑GG‑CGGTACT‑CGCAAAATAGAAGGTC‑TA‑AG‑GCGGATGTTT‑CGTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTaa                                                                                                      <  2:1061978/238‑1 (MQ=255)

                                                                                                                           aaTGCCGAAGGGCA‑TG‑GTGCCTG‑GGCCA‑GTGTTTGCTGTA‑ATATAAAAGACA‑AATGGAATTGAGAAAAAAACCCC‑GG‑CGTTAAT‑CGCCAGAAAGAAAGTC‑TA‑AA‑GGGGTTGTTT‑CGTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa                                                                                                    <  1:1605443/238‑1 (MQ=255)

                                                                                                                            caggcggaGGGCA‑TTGGTGCTGG‑TG‑CA‑GGGGTTGCTGGGAATAAAGAAGAGA‑ATTGGGTTGGTGATAAAACCGCC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTT‑TT‑AG‑GGGGTTTTTT‑TTTTGTTTTATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa                                                                                                    <  2:740222/232‑1 (MQ=255)

                                                                                                                               cggAAGGGAA‑TT‑GTGCCTG‑TGCCA‑GGGGTTGCTGTG‑ATATAGAAGACA‑AATGCGATTGAGATAAAACCCCC‑GG‑CGTTAAC‑CGCAAGAAAGAAATTC‑TT‑AA‑GCGGTTGTTT‑CGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAg                                                                                                 <  1:703498/236‑1 (MQ=255)

                                                                                                                                        a‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CCCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGGTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATAAAAAGGGGTGTCAGCTTTCACACTAACTCTCTCCTTATTAAGTCGGCGGCGAGAAACTAACAAAACATTATAGAt                                                                                       >  2:852943/1‑239 (MQ=255)

                                                                                                                                               gcctg‑tgcaA‑GTGGTTGCTGTG‑AAAGAGAAGACG‑AATGCGTTGGAGATAAAAGCCCC‑GG‑CGGTAAT‑CGCAAGATAGAAAGTT‑TT‑AG‑GGGGATGTTT‑GGTTTCTTTAAAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATgaga                                                                                   <  1:501548/238‑1 (MQ=255)

                                                                                                                                                 ctg‑tggcA‑GGTGTTGTTTGG‑ATAAAGAAGACG‑AATGATATTGAGATGAAACCCCC‑GG‑GGTTAAT‑CGCCAGAAAAAAATTC‑TT‑AA‑GTGTTTTTTT‑CGTTGCTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa                                                                                 <  2:464319/238‑1 (MQ=255)

                                                                                                                                                 ctg‑tgcaA‑GTGTTTGCTGGG‑ATAAAGAAGACG‑AATGCTATTGAGATGAAACCCCC‑GG‑CGGTAAT‑CCCCAGAAAGAATGTC‑TT‑AG‑GCGGTTGTTT‑CGTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa                                                                                 <  1:1576396/238‑1 (MQ=255)

                                                                                                                                                  tg‑tggcA‑GTGGTGTCTGTG‑AAATAAAAGGAC‑AATGCGATTGAATGGAAACCACC‑GG‑AGTAATT‑CGCTAGAAAGACAGTG‑AT‑AA‑GCGATTGTTT‑TGTCGCTATACAGCCCTCCGCCTCTTCGGCCACTTTGGCAATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAAt                                                                                <  2:441526/238‑1 (MQ=255)

                                                                                                                                                   tggtgcggggggTTTCTGAG‑AAAAAGAAGGCG‑AATGCGATTGGGAGAAATACCCC‑GG‑TGATAAC‑CGCAAAATACAGAGTC‑TG‑AA‑GGGTGTGTTT‑CTTGTTTTTAGAGCCTCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa                                                                                 <  2:1917039/228‑1 (MQ=255)

                                                                                                                                                   g‑tgccA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGAAAGAAAGGC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTTCAGCAGGAAGGAAAAAATAAACAAGGTTGTCAGCTTTCACACTAACTCTCTCCTTATTAAGTCGGCGACGCGATACTAACAAAACATTATACATGAGAAATTg                                                                              >  1:1905052/1‑239 (MQ=255)

                                                                                                                                                     tgccA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCCGGGAGTAAAAGATCCAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTTATTCGGCGACGTGATACTAACAACACATTATAGCTGAGCAATTGa                                                                             >  1:1156136/1‑239 (MQ=255)

                                                                                                                                                       ccA‑GTGTTTGGTGTG‑ATATA‑AAAACGAAAGGAGTTTGAAATAAAAACCCC‑GG‑CGGTAAC‑CGCCAGATA‑AAAGTT‑TT‑AAGGGGGTTGTTT‑GTTTGCTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGat                                                                            <  1:306231/238‑1 (MQ=255)

                                                                                                                                                         gtgTGGTTGCTGTA‑AAATAGGAGAGT‑AATGTGATTGAGA‑ACAACCACC‑GG‑ACGTAATCCCCCAGAT‑TAAAGTT‑TTGAA‑GCTGTTTTTT‑TGTTTCTTTAAAGACCACCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                           <  2:415760/236‑1 (MQ=255)

                                                                                                                                                         cattggttggtGGA‑ATAAAAAAGACA‑AGTGAGA‑TGAGAAGAAAACCCCGGG‑GGGTAAT‑CCCAAAATAAAAAGTT‑TA‑AG‑GCGGTTTTTT‑GTTATTTTTAAACAACCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                           <  2:2139549/235‑1 (MQ=255)

                                                                                                                                                         a‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGAtata                                                                         >  1:1917039/1‑239 (MQ=255)

                                                                                                                                                            tGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGa                                                                       >  1:263906/1‑239 (MQ=255)

                                                                                                                                                               ttggttgaaataaAGAAAACG‑AATGATATTGAGATAAAACCCCC‑GG‑GGTAAAC‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGTTTGTTT‑CGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGAt                                                                      <  1:306429/229‑1 (MQ=255)

                                                                                                                                                                tGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGGTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCCGCTTTCACACTAACTCTCTCTTTATTAAATCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCat                                                                   >  1:1085517/1‑239 (MQ=255)

                                                                                                                                                                         taaagaagcCA‑AATGCAATTGATA‑GAAAACCCC‑GGTCTTTAAC‑CCCAAAATAAAAAGTC‑TA‑AA‑GCGGTTTTTT‑TTTTTTTTAAAACAACCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGcc                                                           <  1:852943/236‑1 (MQ=255)

                                                                                                                                                                                gaCG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGGAGTTT‑TGTTGCCTTATAAACACCCGCCCCTTCGGCCAATTTTGCCATTGCAGCAGGAAGTAAAAAATCAAAAAGGGTGTCAGCTTTCACACTAACTCTCTCTTTTTTAAGTCCGCGACGAGATACTAACAAAACATTATAAATGAGAAATTTATATAGAACATTTCTCTCCTGGGTta                                                    >  2:1388847/1‑239 (MQ=255)

                                                                                                                                                                                gaCG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAATTTGatat                                                                          >  1:1127563/1‑217 (MQ=255)

                                                                                                                                                                                   g‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAActctctct                                                                                                                                >  1:832973/1‑160 (MQ=255)

                                                                                                                                                                                   aaaacgcttttGAGAAGAAACCCCC‑GG‑CGGTAAG‑CCCAATTTAGAACTTC‑TA‑AA‑GCGGTTGTCT‑CTTTTCTTTAAAGACTCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTtata                                                  <  1:108216/230‑1 (MQ=255)

                                                                                                                                                                                     aaTGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGGTGTTT‑CGTTGCTTTATAGACACCCCCCTCTTCGGCCACTTTTGCCATTTCAGCAGGAAGTAAAAAATCAAAAGGGGTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACCAGACACTAACAAAACATTAAAGATGAGAAAATGATAAAGATCATAACTCGCCTTGCCTTTAgg                                                >  2:1690827/1‑239 (MQ=255)

                                                                                                                                                                                      aTGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCCGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAAATCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAACATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAg                                                 >  1:1300261/1‑237 (MQ=255)

                                                                                                                                                                                           aTTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCgg                                                                                                                                                                                                    >  1:370741/1‑85 (MQ=255)

                                                                                                                                                                                               aaaaaaaaccccc‑GG‑CGATAAT‑CGCAAGATAGAAATTC‑TG‑AG‑GTGTTTTTTT‑CTTGGCTTAAAAACCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACt                                       <  2:263906/227‑1 (MQ=255)

                                                                                                                                                                                                                    caT‑CGCAGGATAGAATTTC‑AG‑AA‑GCGTTTGTTT‑AGTTTCTTTACGGCCCCCCGCCTCTTCGGCCACTTTTGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGATAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAAt                   <  2:1151984/238‑1 (MQ=255)

                                                                                                                                                                                                                     aT‑CGCCAGATAGAAATTC‑TT‑AA‑GCGTTTTTTT‑CGTTGTTTAAAAGACAACCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATa                  <  1:736017/239‑1 (MQ=255)

                                                                                                                                                                                                                      agcGCCAGATA‑AAAATG‑TT‑AA‑GCGGGTGTTTCCTTTGCTTTAGAGTCAACCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATa                  <  1:1421079/237‑1 (MQ=255)

                                                                                                                                                                                                                        cGCCAGATAGAATGTC‑TT‑AA‑GCGGTTTTTT‑TTTTTTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGACACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACg                <  1:1690827/239‑1 (MQ=255)

                                                                                                                                                                                                                          ccAGAGAGAAAGTT‑TT‑AA‑GCGTTTGTTT‑TGTTGATTTAGAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGa              <  1:746082/239‑1 (MQ=255)

                                                                                                                                                                                                                           cAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAg             >  1:979501/1‑239 (MQ=255)

                                                                                                                                                                                                                            agaaagaaCGTC‑TA‑AA‑GCGTATGTTT‑GGTTTCTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt            <  1:618718/239‑1 (MQ=255)

                                                                                                                                                                                                                            aGATAAAAATTT‑TT‑AC‑GCGGTTTTTT‑CGTTTATCTAAAAACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt            <  1:1388847/239‑1 (MQ=255)

                                                                                                                                                                                                                                          t‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGa  >  1:849456/1‑236 (MQ=255)

                                                                                                                                                                                                                                                   aTGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTaa                                                                                                                         >  1:915217/1‑110 (MQ=255)

CCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTGCCATGCCGAAGGGCA‑TT‑GTGCCTG‑TGCCA‑GTGGTTGCTGTG‑ATATAGAAGACG‑AATGCGATTGAGATGAAAACACC‑GG‑CGGTAAT‑CGCCAGATAGAAAGTC‑TT‑AA‑GCGGATGTTT‑CGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGA  >  NC_007779/954568‑955027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`