Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,062,421	T→G	13.9%	R67R (CGT→CGG)	torD →	molecular chaperone TorD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,062,421	0	T	G	13.9%	224.2 / 2.2	99	R67R (CGT→CGG)	torD	molecular chaperone TorD
Reads supporting (aligned to +/- strand):  ref base T (33/47);  new base G (17/2);  total (50/49)
Fisher's exact test for biased strand distribution p-value = 1.96e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGAC  >  NC_007779/1062183‑1062651                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                            gcgcAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGt                                                                                                                                                                                                                                             >  1:1682034/1‑239 (MQ=255)   gcAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGGGAACGGGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTg                                                                                                                                                                                                                                            >  1:1671460/1‑238 (MQ=255)       tGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGGTGTTCTCCCGTGAGCTGGACGATGAACACCTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGTCGCTCACTGCGGCGGTGAACGAGT‑TGGAACACCGTCTTACCCCGCATATA‑GTACGTGACGac                                                                                                                                                                                                                                       >  2:2064221/1‑238 (MQ=255)         cGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGCGGACCGGCGGGGAAAACCG‑AATGCCACGCCGACA‑CGTCGGGACGAtt                                                                                                                                                                                                                                      >  2:811590/1‑237 (MQ=255)           aaTATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGGAAAACGTATTGCCACGCTGACA‑GGACCTGACGATGcc                                                                                                                                                                                                                                    >  2:1005812/1‑238 (MQ=255)             tatGTCCCGGCGTCGACGGTAAAATCATCCCCCGGCGGACAGCACAACAGTTTGCGGGTGTTCACGCTTGGCTAGCGCGGTTGTTTCCCGGGGGGGTGGATGGTAAACAATGGACAAAAACCGCAAGGGCGCAGATGGCTGAGTGTTTTTGGTTGCAAAA‑AAGCAAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGt                                                                                                                                                                                                                                 <  2:540159/239‑1 (MQ=255)                 ttCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGGATTGCCACGCTGACA‑GTACCTGACGATGccccggag                                                                                                                                                                                                                              >  1:913323/1‑233 (MQ=255)                 ttCCCGCGTCGCAGGATAAACCGTGACCACGCTGCCAGCACAACAGCTTGCCTGTGTTTACGCCTGGCTCCCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACCCAAACCGCCCGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCTCTCACTGCGGCGGGGAACCAAC‑GGGCAAACCGGAGTGCCACCCGGACG‑GCAACTGAAGAAGCCCggccgg                                                                                                                                                                                                                             >  2:635051/1‑234 (MQ=255)                  tCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAAAGCGC‑TGGGAAAACGTATTGCCACGCTGACA‑GGACGGGACGGGTGCCGTCTGGa                                                                                                                                                                                                                            >  2:604590/1‑239 (MQ=255)                       cgTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑g                                                                                                                                                                                                                       >  1:1465354/1‑238 (MQ=255)                       cgTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GGACGTGACGATGCCCGTCTGGAACT‑g                                                                                                                                                                                                                       >  1:1407901/1‑238 (MQ=255)                                    aTCATGACCACGCTTACAGCACAACAGATTGCCTGCGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGCGAGCTGGACGATGACCCACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACCGCGGCGGTGAACGCGC‑CGGAGAACCCGATTGCCACGC‑GTCACGAACGGGACGATGTCCCGCTGGCACT‑GGCTGCGG‑CCtttt                                                                                                                                                                                                         >  2:1566102/1‑238 (MQ=255)                                    aTCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCGGCCC‑GGACGGGCGGCTGCCCGTCGGGAACT‑GGGCGCGG‑AACTTTg                                                                                                                                                                                                        >  1:967844/1‑239 (MQ=255)                                         gACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGGGACGATGCCCGGCTGGAACT‑GGCCCCGG‑GCTTTTTCggg                                                                                                                                                                                                    >  2:596845/1‑237 (MQ=255)                                          aCCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGGACGAGC‑TGGAAAAACGTATTGCCACGCTGCCA‑GTACGTGACGAAGCCCGTCTGGAACG‑GGCCGCGG‑ACTTTTGCgg                                                                                                                                                                                                     >  1:1125279/1‑236 (MQ=255)                                              cGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAAAGAGC‑TGGAACAACGGATTGCCCACCTGACA‑GGACATGGCGAAACCCGGCGCGGACA‑GGCCCCGG‑ACTCTTTCGGCCtatgt                                                                                                                                                                                              >  2:1196903/1‑235 (MQ=255)                                              cGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGGGAAAGAGC‑TGGAAAAACGTATTTCCACGCTGACC‑GTGCGGGACGAAGCCCGGCTGGAACT‑GGGCGCGG‑ACCCTTGCGGCCTGtg                                                                                                                                                                                               >  2:1720306/1‑237 (MQ=255)                                               gCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGGGACGATGCCCGTCTGGAAAT‑GGCCGCGG‑ACTTTTTCGGCCTGtt                                                                                                                                                                                               >  1:2095876/1‑237 (MQ=255)                                                    cacccaaaaataTTGACTGGTTTTACGCCTGGCAGGCGCGGTGTTTCCCCGGTGGCGTGGACGTTGAACAACGGACACAACCCCCCGGGCCGAAGTGGGTTAAGTGTTTTTCTTTGCAAAA‑AAGCGACCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCtgatg                                                                                                                                                                                        <  2:1671460/228‑1 (MQ=255)                                                                 tGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGacaaacaa                                                                                                                                                                            >  1:226060/1‑238 (MQ=255)                                                                      gttttcaCGCCGGGCGCGCGCTGTTTTTCCCCCGGGAGCGGAACGTTAAACAACGGCCAAAAAGCCCCGGTGCGCAGGGGGCGGAGTGTTTTTGGTTGCAAAA‑AGGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcggcg                                                                                                                                                                      <  2:618634/233‑1 (MQ=255)                                                                      gtgtTTCCGCCTGGCATGACGTGTTGTCCTCCGGGGGGCTGGTGTATAAACAACTGAAGCAAGCGGCCGGGGCGCGGATGGCGGAGTTGTTTGGGTTGCTAAA‑AAGCGACCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcggcg                                                                                                                                                                      <  2:806941/239‑1 (MQ=255)                                                                       tgtTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGGGC‑TGGAAAACCGTATTGCCCCGCCGACA‑GTACGGGACGATTCCAGTCTGGAACTGGGCCGC‑G‑ACTTTTGCGGCCTGGTTCTGATGTCCGACAAAAAAgcgggg                                                                                                                                                                      >  2:1802690/1‑236 (MQ=255)                                                                           tACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAAACGTATTGCCACGCTGACA‑GTACGGGACGATGCCCCGCTGGAACT‑GGCCGCGG‑ACCTTTGCGGCCTGTTTCTCAAGACCGCCCAACAAGCGGCgccgcc                                                                                                                                                                 >  2:1928789/1‑239 (MQ=255)                                                                            aCGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAAACGTATTGCCACGCCGACC‑GTGCCGGACGGTGCCCGTCTGGGACT‑GGCCGGGGCCCTTTTGC‑GCCTGTGTCCGACGACCGCCACACAAacgtcccctcc                                                                                                                                                                 >  2:1193690/1‑230 (MQ=255)                                                                             cGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAAACGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGaa                                                                                                                                                                                                                           >  1:549190/1‑181 (MQ=255)                                                                                 tGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGGGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCGGTTTCTGATGACCGACAAACAAGCGGCGCCGCCGTAT‑Gc                                                                                                                                                          >  1:570229/1‑239 (MQ=255)                                                                                  ggCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGGGAACGAGC‑CGGGAAAACGGATTGCCCCGCTGACA‑GTACGGGACGATGCCCGGCTGGGACT‑TGCCGCGG‑ACCTTTTCGGCCCGCTTCTTATGAACTACAAAAAAACAGGCCTGCCggttcga                                                                                                                                                          >  2:736626/1‑233 (MQ=255)                                                                                   gCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGGACGAGC‑TGGAAAAACGTATTGCCACGCTGACA‑GTAAGGGACGAGGCCCGGCCGGGACT‑GGCCGCGG‑GCCTTTTCGGCGCGGGTTTGATGGTCGGCAAAAAAGCGGCGGCGCCGTaggac                                                                                                                                                          >  2:127664/1‑234 (MQ=255)                                                                                   gCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGGCGCCggaagcc                                                                                                                                                          >  2:1952209/1‑232 (MQ=255)                                                                                   gCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCCTATCACCGACAAAAAAGCGGCGCCGCCGGAT‑GCa                                                                                                                                                         >  1:1406882/1‑238 (MQ=255)                                                                                   gCTAGCGCAGTCGTTCTCCCGTGAGCTGGACGATGTACACCTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGACCCGCCGCTCACTGCGGCGGTGAACGCGA‑TTGGAAACCGTAATGCCACCCTGACC‑TGACGGGGCCGTTCCCGGCTGGGACT‑GGCCGCGG‑GCCTTTGCGGCCCGTTTTTTAGTACCGCCAAACAAACGgggcgcaccgcgtgc                                                                                                                                                          >  2:488813/1‑227 (MQ=255)                                                                                        cgcgtttgttCCCCCGGGGGCTGGAGGATGAAAAACTGACGCAAACCGCCGGGGCGAGGGTGGGTGAATGGTTTTCGTGGAAAAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGa                                                                                                                                                                                                                                           <  2:272422/149‑1 (MQ=255)                                                                                        cgcAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGGAAACCGTATTTCCACGCTGACA‑GTACGTGACGAAGCCCGCCTGGGACT‑GGCCGCGG‑GCCTTTGCCGCCTGGTTCTGTAGAACGGCAAAACAGGGGCGCCGCCGtgcggcctggg                                                                                                                                                     >  2:264782/1‑228 (MQ=255)                                                                                         gcgtttgttCCCCGGGGAGCGGGACGTTGAACAACGGACGAAAAGCGCCGGGGCGCAGATGGGTGATTGGTTTTCGTTGATGAA‑AAGCCAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGcc                                                                                                                                                   <  2:1554757/234‑1 (MQ=255)                                                                                                  ctcCCGTGGGCGGGACGATGAACAACTGAGGCATAGCGCCTGGGCGCAGAGGGCTGATTGGTTTTCTTTGCTGAA‑AAGCTATCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑gg                                                                                                                                        <  1:203920/239‑1 (MQ=255)                                                                                                  ctcCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGt                                                                                                                                                                                                                                 >  1:272422/1‑154 (MQ=255)                                                                                                       gTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGa                                                                                                                                    >  1:958544/1‑238 (MQ=255)                                                                                                       gTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGGGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCCGTTTCTGATGACCGGCAAAGAAGCGGGGCCGCCGTAT‑GCATCGGCCTCCAAACA‑GGACGAg                                                                                                                                   >  1:895577/1‑239 (MQ=255)                                                                                                       gTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGGGACGATGCCCGTCTGGAACT‑CGCCGCGG‑GCTTTTGCGGCCTGTTTCTGAGTACCGAACAAAAAACGGCGCTGCCGGAT‑GCACTGGCCTACAAACA‑gagagag                                                                                                                                   >  2:2076391/1‑233 (MQ=255)                                                                                                          aGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCaa                                                                                                                                >  1:1345067/1‑239 (MQ=255)                                                                                                           ggtGGAGGATAAAAAGCAGACACAAATGCCCAGGGCGAGGAGGGCTGAGTGGTGTTGGTGGAAAAA‑AAGGAAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCaa                                                                                                                                <  2:1061418/236‑1 (MQ=255)                                                                                                               gaggataaatcacTGACGTAACGCGCGCGGGCGCAGATGTCTG‑ATGTGTTTTGTTGGTGAACAAGCCTCCCGCCGCTCACTGCGGCGGTGAACGGGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAgaga                                                                                                                            <  2:1827977/227‑1 (MQ=255)                                                                                                               gACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑CGGGAAAACGTATTTCCACGCTGACA‑GCACCGGACGATGCCCGTCTGGAACC‑CGCCGCGG‑ACCTTTTCGGCCCCGTTCTTAGGCCCGACAAAAAAACGGCGCCGCCGCATGGCTTCGGCCTA‑AAACA‑AGACgcagaagagca                                                                                                                           >  2:2178714/1‑229 (MQ=255)                                                                                                               gACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGGGAACGAGC‑TGGAAAACCGGATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATTGCCGCCAAACAAGCGGCGCTGCCGTAT‑GGATCGGCCTACAAACC‑AGACGCGCAACAGAt                                                                                                                           >  2:1272139/1‑239 (MQ=255)                                                                                                                 gaagaaccaacTGCAGAAAACCGCCGGGGCGCAGTTGGCTGAATGTTTTTGGTGGCTAAA‑AACGGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGAtt                                                                                                                          <  1:596845/231‑1 (MQ=255)                                                                                                                  gATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTaa                                                                                                                        >  1:702772/1‑239 (MQ=255)                                                                                                                   aTGAACAACTAACGCAAAGCGCCAGTGCGCAGATGGCTGAAGGTTTTTCGTTGCAAAA‑AAGCGAGCCGCAGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTaaa                                                                                                                       <  1:1250463/239‑1 (MQ=255)                                                                                                                         aacTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGGTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCCTCGGCCCACAAACA‑GGACCAAGAAAAGATTAAACGCTTg                                                                                                                 >  2:71430/1‑239 (MQ=255)                                                                                                                         aacTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAAAGAGC‑TGGGAAAACGGATTGCCACGCTGACA‑GGACGGGACGAAGCCCGTCTGGAACC‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAACCGGGGGCGCCGTCT‑GCCTCAGCCTAAAAATACGAACGAG‑ACGAGATTACACGCATg                                                                                                                 >  2:1036980/1‑239 (MQ=255)                                                                                                                                         ccggcggctgATGGCTTAGTGTTTTTGGTTGATAAA‑AAGCACACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAag                                                                                                                               <  2:1069714/200‑1 (MQ=255)                                                                                                                                                   aTGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACg                                                                                                                     >  1:1069714/1‑209 (MQ=255)                                                                                                                                                        tGAATGTTTTTCGTTGCAGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGc                                                                                  <  1:71430/238‑1 (MQ=255)                                                                                                                                                        tGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCa                                                                                 >  1:1558036/1‑239 (MQ=255)                                                                                                                                                                 ttCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGG‑TGGAAAAACGTATTGCCACGCTGACA‑GTACGTGACGGTGCCCGTCTGGAACT‑GGGCGCGG‑ACTTTTGCGGCGTGTTTTTGAGGACCGACAAAACAGAGGGGCCGGCGTAT‑GGCTTGGCCCACAAACC‑GGACGCGACAGAGAGTAAACGCTTGTTTATTTATGCAGGGGTGCGAAAACTGCGGAATTTTaaaa                                                                         >  2:853910/1‑238 (MQ=255)                                                                                                                                                                  actgtGCTAAA‑GAGCGCACCGCCGCTCACTGCGGCGGTGAACGGGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGa                                                                       <  1:811590/235‑1 (MQ=255)                                                                                                                                                                    tttgcaaaa‑aaGCGACCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAAc                                                                     <  1:1720306/232‑1 (MQ=255)                                                                                                                                                                      tGCGGAA‑AGGCGACCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAAcc                                                                    <  1:465706/238‑1 (MQ=255)                                                                                                                                                                         tGAA‑AAGCGAGCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCGCGCTGACA‑GTGCGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGc                                                                 <  1:229620/238‑1 (MQ=255)                                                                                                                                                                         aaaa‑agGCGACCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGc                                                                 <  2:251828/236‑1 (MQ=255)                                                                                                                                                                                gCGACCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGatcat                                                          <  1:488813/239‑1 (MQ=255)                                                                                                                                                                                   acccgccgCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTg                                                       <  1:912531/237‑1 (MQ=255)                                                                                                                                                                                    aCCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTg                                                       <  1:264782/238‑1 (MQ=255)                                                                                                                                                                                         tggtcgcTGCGGCGGTGAACGAGC‑TGGAAATCCGTGTTGGCACGCGGACG‑GTTCGGGTGGATGCCGGTCTGTAGCT‑GGCAGCGT‑ACTTTTTGGGCCTGTTTCCGCTTACCGCCAAACAAGCGGTTACGCCGTAT‑GCATCGGGCTACAAAGA‑GGGCGAGCAAGAGATTAAACGCTTGCTAGTTGCGGCAGGGATG‑GAAACCGGCGGGAATTTCAACGAACCGGCAGATCATCTGGCGag                                                  <  2:2021855/232‑2 (MQ=255)                                                                                                                                                                                         cgcTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCGACGAACCGGCAGATCATCTGGCGat                                                  <  1:1577664/238‑1 (MQ=255)                                                                                                                                                                                         cgcTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGat                                                  <  2:1262359/238‑1 (MQ=255)                                                                                                                                                                                         cgcTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGat                                                  <  2:1125279/238‑1 (MQ=255)                                                                                                                                                                                         cgcTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGat                                                  <  2:1081498/238‑1 (MQ=255)                                                                                                                                                                                         cgcTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGat                                                  <  1:1196903/238‑1 (MQ=255)                                                                                                                                                                                            acACTGCGAGGGTGAACGAGC‑TGGATAACGGTATTGCCAAGCTGCCA‑GTACGTGACGATGTCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACTACCCGGCAGATCATCTGGCGatctat                                              <  2:1722369/238‑1 (MQ=255)                                                                                                                                                                                                tGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCg                                          <  1:823084/239‑1 (MQ=255)                                                                                                                                                                                                tGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCg                                          <  2:958544/239‑1 (MQ=255)                                                                                                                                                                                                   ggcggTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGaa                                        <  1:40810/238‑1 (MQ=255)                                                                                                                                                                                                        tGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCTGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCaa                                                                          <  2:1060735/199‑1 (MQ=255)                                                                                                                                                                                                        tGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCTGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCaa                                                                          >  1:1060735/1‑199 (MQ=255)                                                                                                                                                                                                        tGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCTATCTATCTCGAATTGCt                                   <  1:2086220/238‑1 (MQ=255)                                                                                                                                                                                                        tGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGcgc                                  >  1:743321/1‑237 (MQ=255)                                                                                                                                                                                                         gAACGAGC‑TGGAAAACCGTATTGCCGCGCTGACA‑GTACGTGACGATGCCCGTCTGGAGCT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCa                                 <  1:85680/239‑1 (MQ=255)                                                                                                                                                                                                             gAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTTCGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTGTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAGCCAGCGGCAATTTCAACGAACCGGCAGATCAGCTGGCGATCTATCTCGAATTTCTCAGcc                              <  1:1411817/238‑1 (MQ=255)                                                                                                                                                                                                               gC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGatctatc                                             <  1:517578/221‑1 (MQ=255)                                                                                                                                                                                                               gC‑TGGAAAACCGGATTTCCACGCTGACA‑GTATGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGCCCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTCCAAACA‑CGACTGGCAAGAGAGTAAACGCTTGTTAGTTGAGGGAGGGAGG‑GAAACCAGCGGCAATCTCCAAGAACCGGCACATCATCTCGCGATGTCTCTCAAACTGCTCCGccc                             >  2:1485309/1‑236 (MQ=255)                                                                                                                                                                                                                  tGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTACACGAACCGGCAGATCATCTGGCGATCTATCCCGAATTGCCCAGCCATCt                          >  2:533602/1‑238 (MQ=255)                                                                                                                                                                                                                       aaCCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCAttt                    <  1:1952209/239‑1 (MQ=255)                                                                                                                                                                                                                       aaCCGGTTTGCGCCGCTGACA‑GTACGTGACGATGCCCGTCTGGACCT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCAttt                    <  2:467244/239‑1 (MQ=255)                                                                                                                                                                                                                          cGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCTGCCTGTTTCTGATGACCGACCAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGCGATTAACCGCTTTTTAGCTGAGGAAGGGACG‑GCAAACAGCGTCAATTCTCACGACCCCGCAGATCATCGTGCGCACCATCTCGATATGCTCCGCCCTCTGCAttttt                  >  2:1233494/1‑238 (MQ=255)                                                                                                                                                                                                                              ttGCCCCCCTGACA‑GTACTTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTg             <  1:853910/239‑1 (MQ=255)                                                                                                                                                                                                                              ttGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGGAG‑GAAACCAAAGGCAATTTCAACGAACCTGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATATGTATTTTTccgtg             >  2:1608716/1‑235 (MQ=255)                                                                                                                                                                                                                              ttGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTg             <  1:604590/239‑1 (MQ=255)                                                                                                                                                                                                                              ttGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTg             <  1:1040969/239‑1 (MQ=255)                                                                                                                                                                                                                               tGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTgg            <  2:249574/239‑1 (MQ=255)                                                                                                                                                                                                                                   aCGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑AAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGgaga        <  2:1407901/239‑1 (MQ=255)                                                                                                                                                                                                                                      cTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCTGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCCGATCATCTGGCGATCTTTCTCGAATTGCCCAGCCCTATGCATTTTTCGCCGGGGGCggg     >  2:542155/1‑239 (MQ=255)                                                                                                                                                                                                                                      cTGACA‑GTACGTGACGATCCCCGTCTGGAACT‑GGCCGCGG‑CCTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAAAA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGGTG‑GAAAACAGCGGCAATTACAACGAACAGGCAGATCATCTGGCGATCTATCCCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGGGAggg     >  2:1676755/1‑239 (MQ=255)                                                                                                                                                                                                                                       tGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGAGCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAATCGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACTAACCTGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAggg     <  1:1898792/238‑1 (MQ=255)                                                                                                                                                                                                                                        gACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGa   <  1:2076391/239‑1 (MQ=255)                                                                                                                                                                                                                                        gACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCGACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTGTCGCTGGGAGAGGGGa   <  2:457636/239‑1 (MQ=255)                                                                                                                                                                                                                                               aCGGGACGATGCCCGTCTGGAACT‑GGCCGCGG‑GCTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGAc  <  2:646278/234‑1 (MQ=255)                                                                                                                                                                                                                                                cGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTg             <  1:1183321/222‑1 (MQ=255)                                                                                                                                                                                                                                                 gTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGat                                                  <  1:744003/184‑1 (MQ=255)                                                                                                                                                                                                                                                 gTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGat                                                  >  2:744003/1‑184 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                            GCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAA‑AAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGC‑TGGAAAACCGTATTGCCACGCTGACA‑GTACGTGACGATGCCCGTCTGGAACT‑GGCCGCGG‑ACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAT‑GCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATG‑GAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGAC  >  NC_007779/1062183‑1062651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑