Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,273,414 G→T 9.8% Q5K (CAA→AAA)  chaA ← sodium‑potassium/proton antiporter ChaA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077791,273,4140GT 9.8% 492.1 / 5.9 151Q5K (CAA→AAA) chaAsodium‑potassium/proton antiporter ChaA
Reads supporting (aligned to +/- strand):  ref base G (13/119);  new base T (14/2);  total (30/121)
Fisher's exact test for biased strand distribution p-value = 1.35e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 151 total aligned reads displayed.

ACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATA  >  NC_007779/1273182‑1273651
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                     
agcACTGAAAGGCGAAGAATACGCGAACCGTAAGGTTCGCCCAGGCGATGGGTTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATGGAGGGCAATGACCACTGGTAGTGTCTGGGTTCTTCCCCGCAGGAACAGCACACCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGAC‑GGGTTTTAACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  2:57497/237‑1 (MQ=255)
aCCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTCCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  1:1011515/239‑1 (MQ=255)
aCCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCGGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  1:1066329/239‑1 (MQ=255)
aCCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGTAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  2:730079/239‑1 (MQ=255)
aCCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  1:311682/239‑1 (MQ=255)
aCCACTAAAAGGCTAAGAAGAAGCGAACCGTAAGGTTCTCCCAGGGGATGAGCTAATACGTCCGCATGACGGACAACATTAAAGTCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACGGGAACAGCACTCCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  2:1490845/239‑1 (MQ=255)
  cACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  1:949848/237‑1 (MQ=255)
       aaagcgtAAAAATAAGCGAACCGTAAGGTTCTCCAGGACGATGGGCTAATCCGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATCCCAATAAGCGCAAGAAGATGGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑tt                                                                                                                                                                                                                                       <  2:1453735/233‑1 (MQ=255)
        aaGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑tt                                                                                                                                                                                                                                       <  1:1423551/238‑1 (MQ=255)
         aGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTGTTAAACCCTCCTGAG‑CATTTT‑CCA‑TTaa                                                                                                                                                                                                                                     >  1:977160/1‑238 (MQ=255)
             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑t                                                                                                                                                                                                                               <  1:1251407/238‑1 (MQ=255)
             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑t                                                                                                                                                                                                                               <  2:690202/238‑1 (MQ=255)
             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACGAAAGGCGCTACTTAAAATACCAAGAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑t                                                                                                                                                                                                                               <  1:640927/238‑1 (MQ=255)
             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCAGGACGGACAACACTAAAGGCGCTCCTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑t                                                                                                                                                                                                                               <  1:288009/238‑1 (MQ=255)
             tAAGAATAAGAGAACCATAAGGTTCTCCCAGGCGATGGGGTAAGACGTCCGCAAGACGAACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCGCTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCGCTGCGAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCGTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑t                                                                                                                                                                                                                               <  2:271208/238‑1 (MQ=255)
             tAAAAATAAGCGAACCATAAGGTGCACGCAGGAGAGGGGCTAAGACGTCCGCCTGACGAAAAACACTAAAGGCGCTACTTAAAATACCAAAAAGCGAAACAAGATTGATGGCAAAAACCACTGGTAGTATATGGCGGCCTCCCCACAGGACCGGCACTACCAGCACAAAACCGGGGAAAACAAGCGAAGTCCCCTTGTGGC‑GGGTTTTCACCGCCTCTTGAG‑AATTTG‑ACA‑TTA‑T‑GG‑t                                                                                                                                                                                                                               <  2:1868344/238‑1 (MQ=255)
                 aaTAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAtt                                                                                                                                                                                                                                                <  1:1560924/222‑1 (MQ=255)
                 aaTAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGGTTTAACCCCCCTTGAG‑CAGTTG‑TCA‑CTA‑T‑TG‑TTTTc                                                                                                                                                                                                                           >  1:1564993/1‑238 (MQ=255)
                   tAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGTTGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCGCAGGAACAGCACTCCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCt                                                                                                                                                                                                                        <  1:389808/239‑1 (MQ=255)
                     aGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTATCGCCCCTTGAG‑CATTTT‑AGA‑TTA‑T‑TG‑TTATCCCttt                                                                                                                                                                                                                      >  1:582385/1‑239 (MQ=255)
                     aGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGGTTTATCGTCCCTTCAG‑AATTAT‑AAT‑TTA‑T‑GG‑TTATGCCttt                                                                                                                                                                                                                      >  2:1779927/1‑239 (MQ=255)
                     aGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAACACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTATCTCCCCTTTAGAAATTTG‑AAA‑TT‑‑T‑GG‑ttttatcttt                                                                                                                                                                                                                      >  2:497442/1‑231 (MQ=255)
                       gaacaagTAAGGTTCTCCCAGGCGATGGGCAAATACGTCCGCAGGACGGAAAACACTAAAGGCGCTACTTAAAATACCAATACGCACAAGAAGATTGCTGGCATTGCCCACGGGTAGTGTCTGGCTGCTTCCCCACAGAACCAGCTCTACCAGCGCCAGAACCGGGAAAATAAACGAGGTCTCGTTGGGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTg                                                                                                                                                                                                                     <  2:1291828/232‑1 (MQ=255)
                           ccGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCTGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTTCTACCCCTTTTG‑CATTTT‑TCA‑TTT‑T‑TG‑TTATTCCTTTgtgtat                                                                                                                                                                                                                >  2:541135/1‑234 (MQ=255)
                              tAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAAAAGCACTACCAGCGCCAGAACCGGGAAAATAACCGAAGTCTCCTTGTGGC‑GGGGGTTTATTCCCCCGTGTG‑CACCTT‑ACC‑TTA‑T‑GG‑TGATCCCTCTgtactcgat                                                                                                                                                                                                             >  2:131724/1‑231 (MQ=255)
                                             cGATGGGCTAATACGTCCGCAGGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTTGGGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAAt                                                                                                                                                                                                 <  1:1894011/236‑1 (MQ=255)
                                                tGGGCTAATACGTCCGCATGACGGACAACCCTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGAGGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑aaa                                                                                                                                                                                           <  2:649802/238‑1 (MQ=255)
                                                tGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGGTTTTTTGCCCCTTTTG‑CGTCTG‑ACA‑TTT‑T‑GGTTTTTCCCTTTTC‑TATGAAATTTTTTAAAATGT‑aaaa                                                                                                                                                                                          >  2:1072854/1‑239 (MQ=255)
                                                      aaTACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTTCCGCCCCTTTAG‑GAATTG‑TCA‑ATATT‑GG‑TTTTCCTTTTG‑TTATGATTTTTTTGTAAAAGT‑AAAAAAt‑agg                                                                                                                                                                                   >  1:1168317/1‑239 (MQ=255)
                                                          cGTCCGCATGACGGACAACACTAAAGGCGCTCCGTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAAAAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAt‑aggtagg                                                                                                                                                                               <  1:1462981/239‑1 (MQ=255)
                                                                  tGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATaa                                                                                                                                                                       <  1:453923/239‑1 (MQ=255)
                                                                      ggACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGa                                                                                                                                                                   <  2:2015791/239‑1 (MQ=255)
                                                                      ggAAAACACTAAAGGCGCTACTTAAAATCCCAATAAGCGCAAGAAGATTGATGGCAATGACCACGGGTAGTGTCTGGCTGCTTCCCCACAGAAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGa                                                                                                                                                                   <  1:1878135/239‑1 (MQ=255)
                                                                           acacTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGGTTTTCCCCCCCCTTAG‑GCTTTT‑ATA‑TTA‑T‑GG‑TTTTTCCTTTTTAGAATAATTTTTTTAAAAAATAAAAAAAA‑AGGAAGGAAAAAAAAAAAAAAgg                                                                                                                                                               >  1:311142/1‑238 (MQ=255)
                                                                            cacTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGa                                                                                                                                                                   <  1:1735411/233‑1 (MQ=255)
                                                                            cacTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAgtgt                                                                                                                                                             <  1:1701722/239‑1 (MQ=255)
                                                                            aacTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGCCCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAgtgt                                                                                                                                                             <  2:844386/238‑1 (MQ=255)
                                                                             acTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTTCCCCCCCTTGAG‑CGATTT‑ACA‑TTC‑T‑TG‑TTTTTCCTTTTCTGGTAGATTTTTCGAAAATAT‑AAAAAAA‑AAGGAGGaaaaaaaaaaaaaaaaa                                                                                                                                                              >  1:288164/1‑234 (MQ=255)
                                                                               tAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTATCTCCCCTTTAA‑GATTTGAAAA‑TTC‑T‑GG‑TT‑TTCCTTTTTATAAGTATTTATTTAAAATTG‑AAAAAAA‑AAGTAAGAAAAATaaaaaaaaagag                                                                                                                                                             >  2:1064503/1‑232 (MQ=255)
                                                                                aaaGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATGGATGCCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTgg                                                                                                                                                         <  1:887281/239‑1 (MQ=255)
                                                                                      gcTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTATCCCCCCTTGAG‑CATTTT‑AAA‑TTA‑T‑TG‑TTTTCCCTTTTCGGCTGAATTTTTTGTAAAAGT‑AAAAAAA‑AAGAAGGGAAAAAAAAAAAAAAAGTATGGagatag                                                                                                                                                   >  1:992921/1‑237 (MQ=255)
                                                                                       cTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTTTCGCCCCTTGAG‑CATTAT‑TAA‑TTT‑T‑GG‑TGATTTCTTTGCTGATGAATTTTTTTGAAATGT‑ATAAAAT‑AAGTATGAAAAAAAAAAAAAAAAGTGTGGagaatgg                                                                                                                                                  >  2:377279/1‑233 (MQ=255)
                                                                                          cTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGaaa                                                                                                                                                                 <  1:1817639/221‑1 (MQ=255)
                                                                                                   ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTCCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACg                                                                                                                                      <  1:497442/239‑1 (MQ=255)
                                                                                                   ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACg                                                                                                                                      <  1:125316/239‑1 (MQ=255)
                                                                                                   ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACg                                                                                                                                      <  1:846869/239‑1 (MQ=255)
                                                                                                   ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACg                                                                                                                                      <  1:1903405/239‑1 (MQ=255)
                                                                                                   caaaaaaGCGCAAGAAGATTGATGGCAATGACCACTGGTGGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACg                                                                                                                                      <  2:1924616/234‑1 (MQ=255)
                                                                                                     aaTAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTTTCACCCCTTTAG‑AATATG‑ACA‑TTT‑T‑TG‑TTTTTCCTTTTTCTATTAATGTATTGTAAAAGT‑AAAAAAA‑AAATAAGAAAAAAAAAAAAAAAAGTATGGAGAACGGTaaaaaattatgaa                                                                                                                                    >  2:1675160/1‑228 (MQ=255)
                                                                                                              aagaagATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGATTTTTCCGCCCCTTTAG‑CATTTT‑ACA‑TTA‑T‑GG‑GTATCCCTTTGCTGATGGAATTATTTGAAATGT‑AAAAAAA‑AAGTAAGGAAAAAAACAAAAAGAGGCTGGGAGTTGGGTACATTTTTATAATTTTTatt                                                                                                                            >  1:509603/1‑236 (MQ=255)
                                                                                                                     ttGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTTTCCCCTCCTTAG‑CAATTT‑ACA‑TTA‑T‑TG‑TTTTTCCCTTTCCGATGAATTTATTGAAAAAGT‑AAAAAAA‑AAGTAGGAAAAAAAAAAAAAAATGTCTGGATATTGGTAACATTTTATGAAATTTTAcacccccttc                                                                                                                    >  1:420296/1‑233 (MQ=255)
                                                                                                                     ttGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGt                                                                                                                     <  1:1357057/238‑1 (MQ=255)
                                                                                                                      tGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTTCCGCCCCCTTAA‑AATTTG‑GCA‑TTT‑TGGG‑TTTTCCCTTTG‑TGATGAATTTTTTCAAAAAGT‑AAAAAATAAGGAAGGAAAAA‑AAAAAAAAAAGTTTTGATAACGGTAAAATTTTAAGAATATTTACACCGCTGTCg                                                                                                                   >  1:1154079/1‑239 (MQ=255)
                                                                                                                              aTGACCCCTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTa                                                                                                           <  1:2003753/239‑1 (MQ=255)
                                                                                                                                   cACTGGTAGTGTCTGGCTGCTTCCCCACAGGACCAGCACTGCCAGCGCCAGACCCGGGAAAATAAGCTAAGTCTCCTTTTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGTTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTTCCCCGCTGTCGATTTTTTACTCAt                                                                                                      <  1:1162652/239‑1 (MQ=255)
                                                                                                                                     cTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTg                                                                                                    <  1:1456533/239‑1 (MQ=255)
                                                                                                                                         tAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CAttt                                                                                                                                                                                                                                               <  1:1897836/103‑1 (MQ=255)
                                                                                                                                          aGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCa                                                                                               <  2:1746135/239‑1 (MQ=255)
                                                                                                                                             gtCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCGTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATa                                                                                             <  1:100662/238‑1 (MQ=255)
                                                                                                                                                tGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTTCAGCCCCTTTTA‑GACTTT‑AAA‑TTT‑T‑TG‑TTTTCCCTTTTCAGATGAAATTTTTGAAAATAG‑AAAAAAA‑AAAGAGGGAAAAAAAAAAAAAAAGTCTGGGTATCTGTAAAATTTTTTGAATTTTTTCCCCGCCGTCTATTTTTTTTTCATTTTGGGATcaaaa                                                                                         >  1:1860837/1‑239 (MQ=255)
                                                                                                                                                 ggatgctTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAAt                                                                                        <  1:1064503/236‑1 (MQ=255)
                                                                                                                                                 ggCTGCTTCCCCACAGGAACAGCACTTCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAAt                                                                                        <  1:919713/239‑1 (MQ=255)
                                                                                                                                                 ggCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAAt                                                                                        <  1:1779927/239‑1 (MQ=255)
                                                                                                                                                 ggCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAAt                                                                                        <  1:541135/239‑1 (MQ=255)
                                                                                                                                                       ttCCCCCCAGGAACAGCCATACCAGCGCCAGAACCGGGAAAATAAGGGAAGTTTCCTTTTGGC‑GGGTTTTTACCGCCTCTTTAG‑CATTTG‑ACA‑TTA‑T‑GG‑GTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATTACAGAAAGTGTCTGGATTTCGGTAACATTTTACGAATTTTTACCCCGCTTTCGATTTTTTACTCATTGGGGCATAAAAATAAGTAt                                                                                  <  1:647722/239‑1 (MQ=255)
                                                                                                                                                       ttCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTAt                                                                                  <  2:1874973/239‑1 (MQ=255)
                                                                                                                                                       ttCCCAACAGGACAGGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTAt                                                                                  <  2:2095621/239‑1 (MQ=255)
                                                                                                                                                       tcccccACCGGCACAGCCCTACCAGCGCCAGAACCGGTAAAAAAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTAt                                                                                  <  2:455773/237‑1 (MQ=255)
                                                                                                                                                       ctcccaccaGGAACAGCAATACCAGCGCCAGAACCGGTAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTAt                                                                                  <  2:2151392/232‑1 (MQ=255)
                                                                                                                                                        tCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAGGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTAtt                                                                                 <  1:725227/239‑1 (MQ=255)
                                                                                                                                                        tCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCCTT‑AG‑CAATTT‑ACA‑TTA‑T‑GG‑TTTTTCCTTTTCAGATGAAATTTTCGAAAAAAT‑AAAAAAA‑AAGGAGGAAAAATAAAAAAAAGAGTCTGGGTATCGGGAAAATTTTTAGAATTTTTAACCCCCCGTCGCTTTTTTTTTCATTTGGGGATAAAAATAAATAtt                                                                                 >  1:1237236/1‑239 (MQ=255)
                                                                                                                                                             acaGGAACAGCAGTTCCAGATCAGGAACCGGAAAAATATGTGAAGTTTACTTGTGGC‑GTGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTATCAGTTTACGAATTTTTACCCCGCTGTCGATTATTTACTCATTGGGGCATAAAAATAAGTATTTCGtt                                                                            <  2:521372/239‑1 (MQ=255)
                                                                                                                                                                  aaCAGCATTTCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGa                                                                        <  1:1080438/238‑1 (MQ=255)
                                                                                                                                                                   aCAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTTTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACa                                                                      <  1:654274/239‑1 (MQ=255)
                                                                                                                                                                        aCTACCGCCGCTATAACCGGGAAAAATAGAGAGGTCACCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTA‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAAtgt                                                                  <  2:874230/238‑1 (MQ=255)
                                                                                                                                                                        aCTACCATCACCAGAACCGGGAAAATAAGCGAAGTCTCCTTTTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑ATGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAAtgt                                                                  <  1:1642196/238‑1 (MQ=255)
                                                                                                                                                                            ccAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGaaaa                                                                                                                                                                           <  1:2156047/129‑1 (MQ=255)
                                                                                                                                                                                 gcCAGAACCGGGAAAATAAGCGAATTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTTACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGc                                                        <  1:1819553/239‑1 (MQ=255)
                                                                                                                                                                                 gcCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGc                                                        <  1:1927581/239‑1 (MQ=255)
                                                                                                                                                                                   cAGAACCTGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                      <  2:1790501/239‑1 (MQ=255)
                                                                                                                                                                                   cAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGTTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                      <  1:888273/239‑1 (MQ=255)
                                                                                                                                                                                   cAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAGTAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                      <  2:582385/239‑1 (MQ=255)
                                                                                                                                                                                   cAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                      <  1:131267/239‑1 (MQ=255)
                                                                                                                                                                                      aaCCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGGTTTTTCCCCCTCTTTTG‑CATTTT‑ACATTTT‑T‑GG‑TTTTCCCTTT‑TAGATGAATTTATTGAAAAATT‑AAAAAAA‑AAGGAGGAAAAAAAACAGAAAATGTCTGGGTATCGGTAAAAATTTACGAATTTTTTACCCGCTGTCGATTTTTTTTTTATTTGGGGATAAAAATAAATATTACGTTTTGACAATGTTTGTTTTTGCGtt                                                     >  1:1258480/1‑236 (MQ=255)
                                                                                                                                                                                       aCCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTctct                                                  <  1:1631513/239‑1 (MQ=255)
                                                                                                                                                                                          gggAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCAt                                                                                              <  1:790701/192‑1 (MQ=255)
                                                                                                                                                                                             aaaaTAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTaaga                                             <  1:1785261/238‑1 (MQ=255)
                                                                                                                                                                                             aaaaTAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTaaga                                             <  1:1203000/238‑1 (MQ=255)
                                                                                                                                                                                                                            ttaaCCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTgg              <  2:311142/236‑1 (MQ=255)
                                                                                                                                                                                                                             ttACCGCCTGTTGAG‑CATTTG‑AAA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAAGTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTATGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGc             <  2:653656/239‑1 (MQ=255)
                                                                                                                                                                                                                             ttACCGCCTCTTTAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGc             <  2:1734538/239‑1 (MQ=255)
                                                                                                                                                                                                                                ccGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAag          <  2:1385897/239‑1 (MQ=255)
                                                                                                                                                                                                                                 cGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAaga         <  1:131724/239‑1 (MQ=255)
                                                                                                                                                                                                                                 cGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCATTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTTGATATCGGTAACATTATACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAaga         <  1:1172421/239‑1 (MQ=255)
                                                                                                                                                                                                                                   ccTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTAt                                                                                  <  2:1424982/164‑1 (MQ=255)
                                                                                                                                                                                                                                   ccTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGt       >  1:380859/1‑239 (MQ=255)
                                                                                                                                                                                                                                      ctTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGa    <  2:288164/239‑1 (MQ=255)
                                                                                                                                                                                                                                      ctTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGa    <  2:172021/239‑1 (MQ=255)
                                                                                                                                                                                                                                       ttGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGat   >  2:947064/1‑239 (MQ=255)
                                                                                                                                                                                                                                        tGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTTGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGata  <  1:546325/239‑1 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                     
ACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGC‑GGGTTTTTACCGCCTCTTGAG‑CATTTG‑ACA‑TTA‑T‑GG‑TTATCCCTTTGCAGATGAATTTATCGAAAATGT‑AAAAAAT‑AGGTAGGAAAAATAACAGAAAGTGTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGCATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATA  >  NC_007779/1273182‑1273651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑