Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,442,107 T→G 14.2% Q131P (CAG→CCG)  nifJ ← pyruvate:ferredoxin (flavodoxin) oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077791,442,1070TG14.2% 323.6 / 4.9 121Q131P (CAG→CCG) nifJpyruvate:ferredoxin (flavodoxin) oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (81/16);  new base G (4/18);  total (86/35)
Fisher's exact test for biased strand distribution p-value = 9.02e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 121 total aligned reads displayed.

CCGGATGTTCCGGGTTGAGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGT  >  NC_007779/1441871‑1442343
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                              
    tggTTCGGGTTTGGGTGCCGGGGCGCGATGGCCCTCAATTTCGACCTGCGGCTGGGAATCAAGATTCTT‑GTCACCGGCCAGCGGAACAATTTTATTG‑TTTCGTTGGGCCGGCCGGAAACCATCAAAAAAATAAATAAGTGGCCC‑GCGGCTTTTCAGCGTCGCAATTTGCAAAATGAGAGCAAATTTTGG‑CCCTTCCTGGACGTTTGCTGCACACAACATCCCGCACCCCGTCG‑Ggcg‑c                                                                                                                                                                                                                                         <  2:24647/236‑1 (MQ=255)
      gTTCCGGGTTGAGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCCAAGAAATGAATAAATGGCAC‑GCGGCCTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CACTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCG‑GGCG‑CAcc                                                                                                                                                                                                                                      >  2:244872/1‑239 (MQ=255)
        tCCGGGTTGAGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCCTCAAATAAATGAATAAAAGGCAC‑GCGGATTTTCAGCGTCGCGATTTGCGAAATGAAAGAAAAGGCATG‑GGTGTCTCCAACGTTTGCTGCACACAAACTAGCGCAACCCGTCT‑gcggccccc                                                                                                                                                                                                                                      >  2:1254145/1‑230 (MQ=255)
        tCCGGGTTGAGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCg                                                                                                                                                                                                                                     >  1:1408576/1‑238 (MQ=255)
          ggggTGGAGTGCCCGGGCGCGATGAGCATCAATTTCGCCCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCCC‑GCGGCTTTTCAGCGTCGCTATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCa                                                                                                                                                                                                                                  <  1:2026511/238‑1 (MQ=255)
                 aGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATTGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACAGCCCTacagcc                                                                                                                                                                                                                           >  2:1987287/1‑234 (MQ=255)
                 aGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTc                                                                                                                                                                                                                           >  1:23130/1‑239 (MQ=255)
                 aGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGGCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGTCGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTc                                                                                                                                                                                                                           >  1:367016/1‑239 (MQ=255)
                      ccGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAAt                                                                                                                                                                                                                      >  1:914149/1‑239 (MQ=255)
                           ggcgtaggccATCAATTCCGACTGGCGGCATGAGATAAAGAATCGT‑GCAACCGGCAAGCGGAAAATTTTTATTGATTTCG‑TGGGAGGTGCGAAACCAATAAAAAAAATGAAAAAAGGGCCC‑GCGGTTTTTCGGCGTCGCGATTTGAGAAAGGAGAGCAAAGTTTTG‑CCCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCG‑GGCG‑CACCGCCATAACGTCGGAATGATc                                                                                                                                                                                                                  <  2:2168465/229‑1 (MQ=255)
                           cgggATCAGCATCAATTTCGCCCTGCGGAATGAGAACAAGAACCGT‑GCCACCGGCCAGCGGGAAAATTTTATTGATTTCG‑TGGGACGTGCGGAACCCATCAAAGAAATGAAAAAAGGGCAC‑GCGCCTTTTCAGCGGCGCGTTTTGCTAAAGGAGAGCAAAGTCTTG‑CGCTCCCTGGACTTTGGCTGCACAAAACACCGCGAAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATc                                                                                                                                                                                                                  <  2:1527467/235‑1 (MQ=255)
                           cgcgtgtggCATCAATTTCGACCGGGGGCATGAATACAAGGA‑CGTGGTCAACGGCCAGGGGGACAATTTTATTGATTGCG‑GGGGACGTGCGGAAACCAGCAAAGAAATAAATAAAGGGCCC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTCCCTGGACTTTTGCTGCACAAAACATCCCGAACCCCGTCG‑GGCG‑GACCGCCATAACGTCGGAATGATc                                                                                                                                                                                                                  <  2:253189/230‑1 (MQ=255)
                             cgATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGGGGAAACCATCAAAGAAATGAATAAATGGCCC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACTTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCC‑CACCGCCATAACGTCGGAATGATCGc                                                                                                                                                                                                                <  1:551327/238‑1 (MQ=255)
                               ttGAGCATCAATTTCGACCTGGGGCATGAGATAAAGAATCGT‑GCCACCGGCAAGCGGGACAATTTTATTGATTTCG‑GGGGACGGGGGGAAACCATCAAAGAAATGAAAAAAGGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGAGAAAGGAGAGCAAAGTCTTG‑CGCTCCCGGGACGTTTGCTGCAAACAACATCCCGAAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCa                                                                                                                                                                                                              <  2:1122848/237‑1 (MQ=255)
                               aTGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACCATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTC‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCaa                                                                                                                                                                                                             >  1:1122848/1‑239 (MQ=255)
                               aTGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGACTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCaa                                                                                                                                                                                                             >  1:1305383/1‑239 (MQ=255)
                                   gCATCAATTTCGACCTGCAGCAGGAGATCAAGAATCGT‑GTCATCGCCCGGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAACCCATCAAAGAAATGAATAAATGGCCC‑GGGGCTTTTCAGCGTCGCGTTTTGCAAAATGAGAGCAAAGTCTGG‑CGCTCCCTGGACGTTTGCTGCAAAAACCACCCCAAAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCaaaaa                                                                                                                                                                                                          <  2:1066849/238‑1 (MQ=255)
                                    cATCAATTTCGACCTGTGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGCCGTGCGGAAACCATCAAAGAAATGAATAAATGGCAA‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGCATGATCGCCAAAAATa                                                                                                                                                                                                        >  1:1008832/1‑239 (MQ=255)
                                        aaTTTCAACCGGCGCAAGGAGATAAAGAACGGT‑TTCCCGGCCCAGGGGGAAATTTTTTTTGATTGGG‑GGGGACGTGGGGAACCAATAAAAAAAAGAAAAAAAGGGCAC‑GGGTTTTTCCGGGGGCGCAGTTTGCGAAATGAGAGCAAAGTCTTG‑CGCTCCCTGGCCGTTTGCGGCAAAAAACCCCGCGAAACCCGGCG‑GGCG‑CCCCGCCATAACGTCGGAATGATCGCCAAAAATagaga                                                                                                                                                                                                    <  2:143355/239‑1 (MQ=255)
                                            tCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGc                                                                                                                                                                                                >  1:658130/1‑239 (MQ=255)
                                              gtcttggggCTTGAGATAAGGAATCGT‑GCACTCGCCAGGCGGGACAATTTTATTGTTTGGG‑TGGGACGTGGGGAAACAATCAAAGAAAAAAAAAAAGGGCCC‑GCGTCTTTTCAGCGTCGCGATTTGCAAAAGGAGAGCAAAGGCTTG‑CGCTCCCTGGAGGTTTGCGGAAAAAAACATCGCGAAACCCGTCG‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCa                                                                                                                                                                                               <  2:407174/231‑1 (MQ=255)
                                               aCCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTAG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCCTCT‑GGCG‑CACCGCCCTAACGTCGGAATGATCGCCCAAAATAGAGAGGCCAtg                                                                                                                                                                                             >  2:184526/1‑239 (MQ=255)
                                                    cGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCAtgtgtg                                                                                                                                                                                         >  1:99396/1‑238 (MQ=255)
                                                     ggtaTGAGATCAAGAATCGT‑GTCAGCGCCCAGCGGGAAAATTTTATTGATTTCG‑TGGGAGGTGCGGAACCCATAAAAGAAATGAAAAAATGGCCC‑GCGGCTTTTCAGCGTCGCGTTTTGCAAAATGAGAGCAAAGTCTTG‑CGTTTCCTGGCCGTTTGCTGCACAAAACATCGCGCAACCCGTCG‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTgg                                                                                                                                                                                        <  2:1743315/235‑1 (MQ=255)
                                                      gCATGAGAACAAGAATGTG‑GTCATCGGCCAGCGGGAAAATTTTTTTGATTTCG‑GGGGCCGGGCGAAAACCAACAAAGAAAGAAAAAAATGGCCC‑GCGGTTTTTCAGCGTCGCGTTTGGCGAAATGAGAGAAAAGTCTGG‑CGCTTCCTGGGCTTTTGCGGCACACAACACCGCACAACCCGGCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGc                                                                                                                                                                                       <  2:1301061/238‑1 (MQ=255)
                                                             aTCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCC‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCCAAAATAGAGAGTGCCTGTGTGGCAACGGTAc                                                                                                                                                                               >  2:40702/1‑239 (MQ=255)
                                                               cAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CTCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGt                                                                                                                                                                             >  1:1018496/1‑239 (MQ=255)
                                                                aaGAATCGG‑GTCAACGGCCAGGGTGAAATTTTTATTGATTGCG‑TGGGAAGGCCGAAAACCATCAAAAAAATGAAAAATTGGCAC‑GCGGCTTTTCAGCGTCGCAATTGGCAAAAGGAGGGCAAAGTCTTG‑CGTTTCCTGGAGGTTGGCTACACACAACAACGGACCACCGGTGA‑GCCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTg                                                                                                                                                                            <  2:2076669/239‑1 (MQ=255)
                                                                 aGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGACTGATCGCCAAAAATAGAGAGTGCATGTGGGGCAACGGTAAGtc                                                                                                                                                                            >  2:168744/1‑237 (MQ=255)
                                                                 aGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTg                                                                                                                                                                            >  2:1624305/1‑238 (MQ=255)
                                                                   aaTCGT‑GTCAGCGGCCAGCGGGACAATTTTATTGATTGCG‑TGGGCCGTGCGGAACCCATAAAAGAAATAAATAAATGGCAC‑CCGGCTTTTCAGCGCCGCGATTTGCGAAATGAGAGCAAAGTCTGG‑CGCCGCCGGTACGTTTGCTGCACACAACATCGCGCAACCCTGTG‑GGCG‑CACCGCCATAACGTCGGAATGATCGc                                                                                                                                                                                                                <  1:1186843/200‑1 (MQ=255)
                                                                     tCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCt                                                                                                                                                                       >  1:645282/1‑239 (MQ=255)
                                                                     tCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCt                                                                                                                                                                       >  1:1802088/1‑239 (MQ=255)
                                                                       gt‑gtCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTAc                                                                                                                                                                     >  1:102162/1‑239 (MQ=255)
                                                                           tCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACAt                                                                                                                                                                   >  1:2018125/1‑238 (MQ=255)
                                                                           tCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGGCG‑GCCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGGCCATGTGTGGCAACGGGACGAGCCGCTACAt                                                                                                                                                                   >  2:1434047/1‑238 (MQ=255)
                                                                            caacGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATAAAAAAAATGAATAAATGGCGC‑GCGGCTTTCCAGCTTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGCCGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGc                                                                                                                                                                 <  1:851916/236‑1 (MQ=255)
                                                                            cATCCGCTAGCGGGACAATTTTATTGTTGTGG‑TGGCTCGGGGGAACACCATCAAAAAAATAAATAAATGCCAC‑GCGGTTTTTCAGCGTCGCGTTTGGCGAAATGAGGGCATGGTTTTG‑CCTTTCCTGGACGTTTGCTCCCCACAACACCGCGCACCCCGTCG‑GGCC‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGc                                                                                                                                                                 <  2:761130/239‑1 (MQ=255)
                                                                             aTCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGTCGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CCCCGCCATAACGTCGGAATGATCGCCAAAAATAGCGAGTGCATGTGTGGCCACGGTACGTGCCGCTCCATGCa                                                                                                                                                                >  2:512795/1‑239 (MQ=255)
                                                                              tCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCG‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATaga                                                                                                                                                                                                      >  2:1186843/1‑200 (MQ=255)
                                                                                gcccAGCGGAAAATTTTTATTGATTTCG‑GGGGTGGTGCGGAAACAATCAAAGAAATGAATAAATGGCAC‑GCGTTTTTTCAGCGTCGCGATTTGCGAAAGGAGAGAAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGAAACCCGTCG‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGa                                                                                                                                                             <  2:322223/237‑1 (MQ=255)
                                                                                   caacagaaaatttttttTGATTCCG‑TGGGAGTGGCGAAAACAATAAAAGAAATAAAAAAATGGCAC‑GCGGTTTTTCAGCGTGGTGTTTGGAGAAATGAGAGCAAAGTCTTG‑CGTTTCGTGGACGTTTGCCGAACAAAAAACCGCG‑AACCCTGCTGGGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACaa                                                                                                                                                          <  2:1419880/228‑1 (MQ=255)
                                                                                       gggACAATTTTATTGATTTCG‑GGGGACGTGCGGAAACCATAAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACaaa                                                                                                                                                         <  1:1343196/236‑1 (MQ=255)
                                                                                         gACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACACACGgtg                                                                                                                                                    >  2:162077/1‑239 (MQ=255)
                                                                                                     gtgtacG‑TGGGACGGGAGAAAACCATAAAAAAAATGAA‑AATAGGCGCGGCTTCTTCGCGGCGTGGCTTTTTGAGAAA‑GAGGACCAAGTTTTGCCCCTTCCGGGCCTTTGGCCCCACACACCACCCCACAACCCGGGT‑GGCG‑CCCCGCCATACCGTCGGAATGATCGCCAAAAATGGAGAGTGCTTGTGTGGCAACGGTACGTGCCGCTACATGCAGGAAAAACGGTGTTAGTGCGCCTg                                                                                                                                        <  2:950698/234‑1 (MQ=255)
                                                                                                        ttCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCa                                                                                                                                     >  1:2139257/1‑239 (MQ=255)
                                                                                                        ttCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCa                                                                                                                                     >  1:1231716/1‑239 (MQ=255)
                                                                                                        ttCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCa                                                                                                                                     >  1:387134/1‑239 (MQ=255)
                                                                                                        ttCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCa                                                                                                                                     >  1:1219856/1‑239 (MQ=255)
                                                                                                        ttCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCa                                                                                                                                     >  1:1455166/1‑239 (MQ=255)
                                                                                                        ttCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCa                                                                                                                                     >  1:46277/1‑239 (MQ=255)
                                                                                                                 aCGTGCGGAAACCATCAAAGAAATGAATAAATGGCTC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTAc                                                                                                                             >  2:488208/1‑239 (MQ=255)
                                                                                                                 aCGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAACTGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCG‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGGGCATGCGTGGCAACGGTACGTTGCGCTACATGCAAGCCCAACGGCGGTAGTCCGCCTGCCAGGTTGTAc                                                                                                                             >  2:260764/1‑239 (MQ=255)
                                                                                                                           aCCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGa                                                                                                                   >  2:610449/1‑239 (MQ=255)
                                                                                                                               tCAAAGAAATGAATAAATGGCAC‑GCGTCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGAACGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCAACACGCAGGACAAACGGTGTTAGTTGTCCTGCAAGTTTGTACAGCGTCggagaca                                                                                                                >  2:1967419/1‑233 (MQ=255)
                                                                                                                               tCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGatca                                                                                                                >  2:1937831/1‑238 (MQ=255)
                                                                                                                               tCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGatca                                                                                                                >  1:1305192/1‑238 (MQ=255)
                                                                                                                               tCAAAGAAATGAATAAAGGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAAGGAGAGCAAAGTCTTG‑CGCTTCCGGGACGTTTGCTGCACACAACATCGCGAAACCGGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGatcat                                                                                                               <  1:376316/239‑1 (MQ=255)
                                                                                                                                        tGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCaa                                                                                                      >  1:828728/1‑239 (MQ=255)
                                                                                                                                               aTGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACaaa                                                                                                                                                         >  2:1272034/1‑181 (MQ=255)
                                                                                                                                               aTGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGc                                                                                               >  1:811640/1‑239 (MQ=255)
                                                                                                                                               aTGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCAAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACTTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACaaa                                                                                                                                                         <  1:1272034/181‑1 (MQ=255)
                                                                                                                                                    aC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGCACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATg                                                                                           >  2:1522044/1‑238 (MQ=255)
                                                                                                                                                            tttgCAGCGGCGTGTTTGGCGAAAGGGAAGAAAGGTCTGG‑CCCTCCCTGGGCTTTTGCTCCACACAACACCCCGAACCCCGTCG‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAAc                                                                                   <  1:463252/239‑1 (MQ=255)
                                                                                                                                                                   cGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTg                                                                            >  1:1346951/1‑239 (MQ=255)
                                                                                                                                                                     tCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGaa                                                                          >  1:1827674/1‑239 (MQ=255)
                                                                                                                                                                     tCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGAAAACCCTGCGATGACGTAAACGATGTTGaa                                                                          >  1:1518202/1‑239 (MQ=255)
                                                                                                                                                                            ttGCGAGATGAGGAGAAAGTTTTG‑CCCCTCCTGGGCGTTAGCCACCACCAACCTCGCACCACCCGTGG‑GGCGCCCCCGCCAAAACGACGGAAGGATCGCAAAAAATAGAGGGTGCATGTGGGGCAACGGTACGTGCCGCTACAGGCGGGACAAGCGGTGTTATTGCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCa                                                                    <  2:2157938/239‑1 (MQ=255)
                                                                                                                                                                                          cAAAGTCGTG‑CCCCCCCGGGACGTTGTCCACAAAAACCACCGCGCCACCCGTGG‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATGGAGAGTGCATGTGTGGCAACGTTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAgcg                                                     <  1:2020247/239‑1 (MQ=255)
                                                                                                                                                                                            aattCTTG‑CCCTTCCGGCAGTTTCGCTGCCCACAACGCCGCCAACCCCTTCG‑GGCG‑CCCCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGcc                                                   <  1:244872/236‑1 (MQ=255)
                                                                                                                                                                                               tCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGAGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTAGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGcc                                                          >  1:1930945/1‑228 (MQ=255)
                                                                                                                                                                                                          ccTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTa                                         >  1:712958/1‑236 (MQ=255)
                                                                                                                                                                                                          ccTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCg                                      >  1:829787/1‑239 (MQ=255)
                                                                                                                                                                                                          ccTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATACAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAACCGATGTTGAAACGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCg                                      >  1:1747645/1‑239 (MQ=255)
                                                                                                                                                                                                                    tgctgcACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCAtgtg                                                                                                                                                                                           >  2:862194/1‑80 (MQ=255)
                                                                                                                                                                                                                    tgctgcACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACg                                                                                  >  1:79815/1‑185 (MQ=255)
                                                                                                                                                                                                                        gcACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCtt                         >  2:772294/1‑238 (MQ=255)
                                                                                                                                                                                                                        gcACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGAGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCCTGCACGGTACCGATAGCACCAGcct                         >  2:2128075/1‑236 (MQ=255)
                                                                                                                                                                                                                            acaacaTCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCg                      >  1:318257/1‑237 (MQ=255)
                                                                                                                                                                                                                              aacaTCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGGTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACt                   >  1:1829524/1‑238 (MQ=255)
                                                                                                                                                                                                                              aacaTCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACt                   >  1:1355658/1‑238 (MQ=255)
                                                                                                                                                                                                                              aacaTCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACt                   >  1:1399871/1‑238 (MQ=255)
                                                                                                                                                                                                                              aacaTCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACt                   >  1:1399887/1‑238 (MQ=255)
                                                                                                                                                                                                                                   cgcgCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCAtt              >  1:326242/1‑238 (MQ=255)
                                                                                                                                                                                                                                   cgcgCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCAtt              >  1:621473/1‑238 (MQ=255)
                                                                                                                                                                                                                                     cgcAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCa           >  2:2071680/1‑239 (MQ=255)
                                                                                                                                                                                                                                     cgcAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCa           >  1:1442469/1‑239 (MQ=255)
                                                                                                                                                                                                                                     cgcAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGAACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCa           >  1:1066950/1‑239 (MQ=255)
                                                                                                                                                                                                                                        aaCCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAAcc        >  1:121550/1‑239 (MQ=255)
                                                                                                                                                                                                                                        aaCCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAAcc        >  1:566917/1‑239 (MQ=255)
                                                                                                                                                                                                                                        aaCCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAAcc        >  1:1619032/1‑239 (MQ=255)
                                                                                                                                                                                                                                        aaCCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAAc         >  1:2219131/1‑238 (MQ=255)
                                                                                                                                                                                                                                        aaCCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAAc         >  1:374108/1‑238 (MQ=255)
                                                                                                                                                                                                                                          cccGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGCTGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGAACCCGCTTCCGACTGCATTTCAACCa       >  1:1022214/1‑238 (MQ=255)
                                                                                                                                                                                                                                          cccGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTg                                                            >  1:517230/1‑185 (MQ=255)
                                                                                                                                                                                                                                          cccGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAc      >  2:1689019/1‑239 (MQ=255)
                                                                                                                                                                                                                                          cccGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAc      >  1:2063513/1‑239 (MQ=255)
                                                                                                                                                                                                                                          cccGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAc      >  1:694590/1‑239 (MQ=255)
                                                                                                                                                                                                                                              tCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCgt  >  1:1341273/1‑239 (MQ=255)
                                                                                                                                                                                                                                              tCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCCTCCGACTGCCTTTCCACCACGCgt  >  2:1014919/1‑239 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                              
CCGGATGTTCCGGGTTGAGTGCCCGGGCGCGATGAGCATCAATTTCGACCTGCGGCATGAGATCAAGAATCGT‑GTCATCGGCCAGCGGGACAATTTTATTGATTTCG‑TGGGACGTGCGGAAACCATCAAAGAAATGAATAAATGGCAC‑GCGGCTTTTCAGCGTCGCGATTTGCGAAATGAGAGCAAAGTCTTG‑CGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCT‑GGCG‑CACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGT  >  NC_007779/1441871‑1442343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑