BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,618,471	T→A	9.0%	V332E (GTA→GAA)	yneK →	putative protein YneK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,618,471	0	T	A	9.0%	480.2 / 4.3	148	V332E (GTA→GAA)	yneK	putative protein YneK
Reads supporting (aligned to +/- strand): ref base T (89/44); new base A (2/13); total (91/57)
Fisher's exact test for biased strand distribution p-value = 8.18e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 149 total aligned reads displayed.

TCATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTAACCGTTTTAAGATCATT  >  NC_007779/1618233‑1618706

tCATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGt                                                                                                                                                                                                                                              >  2:1005414/1‑239 (MQ=255)

 cATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTa                                                                                                                                                                                                                                             <  1:844961/239‑1 (MQ=255)

 cATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATGTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTa                                                                                                                                                                                                                                             <  2:1269120/239‑1 (MQ=255)

        ttCTAACAAACATGTACTACCCTAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATg                                                                                                                                                                                                                                      >  1:1430357/1‑239 (MQ=255)

         tCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGACTCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATCCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGCACCCTCAAACTGTTTGTAAAACATGa                                                                                                                                                                                                                                     >  2:204477/1‑239 (MQ=255)

         tCTAACAAAAATGCACTACCGAAAGCCTGCTTCAGCTTTTTATCCCTTTTAGCAGAACAAAAACCTCCTCATTTTAAGAACTTGTTTTTATTTTTCGCAAATATGTTATTGCACTATCACCAATTTATGAATCCAAATGAAAGTGATTTG‑AATGACGTGTTGATACAGCCATAATTATGTGATGAAAAAATTATCAAACATACGGCGCGCAGGACCCTCAACCTGTTTGAAAAAAATGa                                                                                                                                                                                                                                     >  2:1007007/1‑239 (MQ=255)

            aacaaacaTGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAac                                                                                                                                                                                                                                  >  1:1347483/1‑239 (MQ=255)

            aacaaacaTGTACTACCCGAAGCCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCATCATTTTCAGCACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAac                                                                                                                                                                                                                                  >  1:1281808/1‑239 (MQ=255)

                 acaTGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATATCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCg                                                                                                                                                                                                                              >  1:438316/1‑238 (MQ=255)

                  caTGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGcc                                                                                                                                                                                                                            >  2:87092/1‑239 (MQ=255)

                  caTGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGcc                                                                                                                                                                                                                            >  1:768716/1‑239 (MQ=255)

                           cccGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑Gtt                                                                                                                                                                                                                    >  1:51643/1‑237 (MQ=255)

                             cGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGAAAAAAATGAAACACCGCCAAAA‑GTTACt                                                                                                                                                                                                                 >  2:1248409/1‑238 (MQ=255)

                                aGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACg                                                                                                                                                                                                             <  1:2093088/239‑1 (MQ=255)

                                    tGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATAACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAg                                                                                                                                                                                                          >  1:1340617/1‑238 (MQ=255)

                                     gCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGa                                                                                                                                                                                                         >  2:691698/1‑238 (MQ=255)

                                       aTCTGCTTTTTATCCTTTTTAGCAGAACAAGATTTTCGTCATTTTCAGAATTTGTTTTTATTTTTGGCCTAGATGTTATTGCGTTTTCATCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCAGCAAGTGAGGATAAAATGATCAAACATATGGCGCGCGGGGCCCCCAAACTCTTTGTAAGACATGATTTTCCGCCAACA‑GTTCCGCACGAAGAcc                                                                                                                                                                                                       <  2:487603/238‑1 (MQ=255)

                                       aTCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGAcc                                                                                                                                                                                                       <  2:51643/238‑1 (MQ=255)

                                       aTCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGAcc                                                                                                                                                                                                       <  1:691698/238‑1 (MQ=255)

                                                      cTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAgg                                                                                                                                                                                         >  2:180452/1‑237 (MQ=255)

                                                      cTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGc                                                                                                                                                                                        >  2:1078735/1‑238 (MQ=255)

                                                      cTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTCGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAAACCTGGTGAAAAACAgga                                                                                                                                                                                        >  2:405260/1‑237 (MQ=255)

                                                        tttAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTc                                                                                                                                                                                     <  1:1248409/239‑1 (MQ=255)

                                                        tttAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTc                                                                                                                                                                                     <  2:743011/239‑1 (MQ=255)

                                                                aaCAAGAATCTCCTCCTTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAACA‑GTTACTCACGAACACCTGGTGAAAAACAGGCCTCGCTcc                                                                                                                                                                                >  2:1458791/1‑236 (MQ=255)

                                                                aaCAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTc                                                                                                                                                                                     <  1:670170/231‑1 (MQ=255)

                                                                aaCAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGCCCTCGCTcc                                                                                                                                                                                >  2:930053/1‑236 (MQ=255)

                                                                       aTCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGac                                                                                                                                                                      <  1:2148867/239‑1 (MQ=255)

                                                                          tcctcATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGTCCTCGCTCCCCTGTCAGacca                                                                                                                                                                    >  1:644745/1‑238 (MQ=255)

                                                                          tcctcATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGacca                                                                                                                                                                    >  1:2029939/1‑238 (MQ=255)

                                                                          tcctcATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGacca                                                                                                                                                                    >  1:293388/1‑238 (MQ=255)

                                                                            ctcATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAaca                                                                                                                                                                                                                                 <  1:190742/176‑1 (MQ=255)

                                                                                           tGTTTTTATTTGTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAACGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAACAATGACACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACATGCCTCACTCCCATGTCAGACCACCTATACCCGCAACCGcc                                                                                                                                                  >  2:2012818/1‑239 (MQ=255)

                                                                                                 tATTTTTCGCAAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACg                                                                                                                                            <  1:738718/239‑1 (MQ=255)

                                                                                                       tCGCAAATATGTTATTGCACTATCCCCAATTTAAGAATCCCAATAAAAGTGATTTG‑AATGACGTGTTGAGGCCAGCATCATTAAGTGATAATAAAATTATCAAACATATGGCGCGCAGGACCCCCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGAc                                                                                                                                      <  2:2143863/239‑1 (MQ=255)

                                                                                                              tatGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCaaa                                                                                                                                               >  1:1970513/1‑223 (MQ=255)

                                                                                                                       gCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGCCCCTCAAACTGTTTGTAAAAAATGAAACCCCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCCCCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCAtt                                                                                                                      <  1:204477/239‑1 (MQ=255)

                                                                                                                        cACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTa                                                                                                                     >  2:639114/1‑239 (MQ=255)

                                                                                                                          cTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAGACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTaa                                                                                                                    >  1:1938523/1‑238 (MQ=255)

                                                                                                                          cTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAg                                                                                                                                                                        <  1:871098/186‑1 (MQ=255)

                                                                                                                          cTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTaa                                                                                                                    >  2:743022/1‑238 (MQ=255)

                                                                                                                          cTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGATCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTaa                                                                                                                    >  1:1503138/1‑238 (MQ=255)

                                                                                                                            aTCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGaa                                                                                                                             >  1:361484/1‑227 (MQ=255)

                                                                                                                             tCACCCATTTATGAATCCCAATGAAAGAGAATTG‑AATGCCGTGTTGATGCCAGCATAATCAAGTGATGATAAAATTATCAAACATCTGGCGAGCAGGACTCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGCCCTGGTGAAAAACAGGCCTCGCTCCTCTGCCAGACCACCTATACCCGCAACCGCCAAAACTCCACACCTCCCTGACCGTCATTAAAcgg                                                                                                                >  2:1121614/1‑237 (MQ=255)

                                                                                                                             tCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGa                                                                                                                                                                       >  2:1117351/1‑184 (MQ=255)

                                                                                                                             tCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGa                                                                                                                                                                       <  1:1117351/184‑1 (MQ=255)

                                                                                                                             tCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTaaa                                                                                                                   >  1:1487576/1‑236 (MQ=255)

                                                                                                                             tCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGACCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCg                                                                                                                >  1:1063757/1‑239 (MQ=255)

                                                                                                                               aCCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACCCCGCCAAAA‑GTTCCTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTg                                                                                                              <  1:1005414/239‑1 (MQ=255)

                                                                                                                                   aTTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGt                                                                                                          >  1:759742/1‑239 (MQ=255)

                                                                                                                                            tCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGAc                                                                                                   >  1:1483831/1‑237 (MQ=255)

                                                                                                                                              ccAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCCTTAAACCGCGATGTTACCGAccct                                                                                                >  2:1453064/1‑238 (MQ=255)

                                                                                                                                               aaaTGAAAGT‑ATTTGAAATGACGTTTGAATGCCGAAATTATAAAGTGATGAAAAAATTATAAAAAATATGGCGCGCAGGACCCCAAACCTTTTTTAAAAAAATAAACCCCCGCCAAAA‑GTTACCCACAAAGACCTGGTAAAAAACAGCCCCCGCTCCCCTGTCAGCCCCCCTATCCCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGActctct                                                                                              <  2:674788/238‑1 (MQ=255)

                                                                                                                                                 aTGAAAGTGATTTG‑AATGACGTGTAGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGCCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTg                                                                                             >  1:1895886/1‑238 (MQ=255)

                                                                                                                                                      aGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTGACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGt                                                                                       >  1:1625608/1‑239 (MQ=255)

                                                                                                                                                           tttG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTaaa                                                                                                                   >  1:642596/1‑206 (MQ=255)

                                                                                                                                                                  tGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTGCTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATCCCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAg                                                                            <  1:1078735/239‑1 (MQ=255)

                                                                                                                                                                  caaggttttGATGCCACCACTATTAATGGATGAAAAAATTAAAAAACATAGGGCGCGCAGGCCCCTAAAACGTTTTTAAAAAAAGGAACCCCCGCCAAAA‑TTAACCCACAAAGCCCTGGGAAAAAACGGCCCCCGCTCCCCTTTCAGACCCCCTATCCCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAg                                                                            <  2:1319539/232‑1 (MQ=255)

                                                                                                                                                                     cGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGCCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCg                                                                          >  1:924222/1‑238 (MQ=255)

                                                                                                                                                                                 aaaatcttTAAGTGATAAAAAAATTATAAAACAATTGGCGCGCGAGACCCTAAACCGGTTGAAAAAAAATGAACCCCCGCAAAAA‑TTTACTCACAAAGCCCGGGAGAAAACCAGCCCCCGCCCCCCTGACAGACCACCTATCCCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGa                                                             <  2:2029939/236‑1 (MQ=255)

                                                                                                                                                                                   catcatTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGAc                                                                                           >  1:1110680/1‑207 (MQ=255)

                                                                                                                                                                                   catcatTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAAt                                                                               >  1:546437/1‑219 (MQ=255)

                                                                                                                                                                                   catcatTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGCGAAAGAATCAGCGTCAGAGAAACGGaaa                                                           >  2:2013423/1‑239 (MQ=255)

                                                                                                                                                                                        ttAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAAcgcg                                                      >  1:2128124/1‑239 (MQ=255)

                                                                                                                                                                                        ttAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAAcgcg                                                      >  1:472144/1‑239 (MQ=255)

                                                                                                                                                                                           aGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGAt                                                    >  1:1531609/1‑238 (MQ=255)

                                                                                                                                                                                             tgatgaTAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGActctct                                                                                              >  2:54618/1‑194 (MQ=255)

                                                                                                                                                                                             tgatgaTAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCa                                                 >  2:307121/1‑239 (MQ=255)

                                                                                                                                                                                             tgatgaTAAAATAATCAAACATAGGGACCCCGGGACCATCAACTGGTGTGAAAAAAAGGAAACCCCGCCAAAA‑TTTACCCACAAACACCTGGTGAAAACCAGGCCCCGCCCCCCTGTCAGCCCCCCTATCCCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATcc                                                  <  2:793439/238‑1 (MQ=255)

                                                                                                                                                                                              gatgatAAAATTATAAAAATTTGGGCGGGCAGGCCCCAAAAACTGTTTGAAAAAAATAAACCCCCGCCAAAA‑GTTACCCACGAAGCCCTGGTGAAAAACAGCCCTCGCTCCCCGTTCAACCCACCTATCCCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCa                                                 <  2:924222/238‑1 (MQ=255)

                                                                                                                                                                                               atgatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGGGAAACGGAAAACGCGATCCAg                                                >  2:1315665/1‑238 (MQ=255)

                                                                                                                                                                                               atgatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGGGAAACGGAAAACGCGATCCAg                                                <  1:1315665/238‑1 (MQ=255)

                                                                                                                                                                                               atgatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGa                                               >  1:190959/1‑239 (MQ=255)

                                                                                                                                                                                                tgatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGa                                               >  1:1088227/1‑238 (MQ=255)

                                                                                                                                                                                                tgatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGCGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAACCGCGATCCAGa                                               >  2:1194145/1‑238 (MQ=255)

                                                                                                                                                                                                tgatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGGTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGACATTAAACCGCGATGTTACCGACTCTCAGACGGGTGAACGAATCAACGTCAGAGAAACGGAAAACGCGATCCAGa                                               >  2:1773991/1‑238 (MQ=255)

                                                                                                                                                                                                tgatAAAATTATCAAACATATGGCGCGCAGGACCATCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGATGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTATCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGAt                                              >  1:1808160/1‑239 (MQ=255)

                                                                                                                                                                                                gtaaaaaaTTATCAAACAAGTGCGGCGAAGAGCCCCAAAAGTTGTGGAAAAAAATGAAACCCCGCAAAAA‑GTTCTTCACGAAGACCTGATAAAAAACGGCCCCCGCCCCCCTGTCAGCCCACCTATCCCCCAAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGAt                                              <  2:1407889/235‑1 (MQ=255)

                                                                                                                                                                                                 gatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGac                                                                                                                                                                      <  1:1027274/118‑1 (MQ=255)

                                                                                                                                                                                                 gatAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATc                                             >  1:1999069/1‑239 (MQ=255)

                                                                                                                                                                                                          aTCAAACATATGGCGCGCAGGACCCTCAAACGGTTTGAAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCa                                    <  1:1453064/239‑1 (MQ=255)

                                                                                                                                                                                                          aTCAAACATATGGCGCGAAGGACCCACAACCTGTTTGTAAAAAATAAACCACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCa                                    <  1:698256/239‑1 (MQ=255)

                                                                                                                                                                                                              aaCATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGt                                >  1:818271/1‑239 (MQ=255)

                                                                                                                                                                                                                     ggccgccgagACCCCCAAAATTTTTTTAAAAAAATAAACCCCCCCAAAATGTACCCCACGAAGCCCGGGAAAAAAACAGGCCCCGCTCCCCTGTCAAACCCCCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTca                           <  2:1063757/229‑1 (MQ=255)

                                                                                                                                                                                                                     ggCGCGCAGGCCCCTCAATCTGTTTGTAAAAAATGAAACACCGCCAACA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACCCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCCCAAATGCATTTAATTcaca                         >  2:1369581/1‑239 (MQ=255)

                                                                                                                                                                                                                     ggCACGAAGCACCCTCAAACTGTTTAAAAAAAAGAAAACCCCGCCAAAA‑GTTACTCACAAAGCACTGGTGAAAAACCGCCCTCCCTCCCCTGTCAGACCACCTATCCCCGCATCCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTcac                          <  2:233897/238‑1 (MQ=255)

                                                                                                                                                                                                                         cgcAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCAtt                                  >  1:1224023/1‑226 (MQ=255)

                                                                                                                                                                                                                         cgcAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCAcatcat                     >  1:1309107/1‑239 (MQ=255)

                                                                                                                                                                                                                         cgcAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCAcatcat                     >  1:2146015/1‑239 (MQ=255)

                                                                                                                                                                                                                         cgcAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGAATTCAcatcat                     >  1:956374/1‑239 (MQ=255)

                                                                                                                                                                                                                           cAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTa                   >  1:394678/1‑239 (MQ=255)

                                                                                                                                                                                                                               aCCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTaa                  <  1:639114/236‑1 (MQ=255)

                                                                                                                                                                                                                                          gTTTGTAAAAAAGAAAACCCCGCAAAAA‑TTTACCCCCGAAGACCTGGTGAAAAACAGGCCCCGCTCCCCTGTCAAACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTAACCGTTTTAAGATCa    <  2:154689/239‑1 (MQ=255)

                                                                                                                                                                                                                                           tttGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCTCAAATGCATTGTATTCACATCATTAACCGTTTTAAGATCAt   >  2:1182235/1‑239 (MQ=255)

                                                                                                                                                                                                                                           tttGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACaaa                                        <  1:1605158/202‑1 (MQ=255)

                                                                                                                                                                                                                                           tttGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACaaa                                        >  2:1605158/1‑202 (MQ=255)

                                                                                                                                                                                                                                           tttGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTAACCGTTTTAAGATCAt   >  1:606605/1‑239 (MQ=255)

                                                                                                                                                                                                                                           tttGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTAACCGTTTTAAGATCAt   >  1:1029241/1‑239 (MQ=255)

                                                                                                                                                                                                                                             tGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTcac                          >  1:1958979/1‑214 (MQ=255)

                                                                                                                                                                                                                                             tGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTAACCGTTTTAAGATCAtt  >  1:871234/1‑238 (MQ=255)

TCATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTG‑AATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAA‑GTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAAACCGTGATGTTACCGACTCTCTGACGCGTGAAAGAATCAGCGTCAGAGAAACGGAAAACGCGATCCAGATCACAAATGCATTGTATTCACATCATTAACCGTTTTAAGATCATT  >  NC_007779/1618233‑1618706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`