BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,260,091:1	+T	100%	intergenic (‑1/‑277)	pth ← / → ychH	aminoacyl‑tRNA hydrolase/stress‑induced protein YchH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,260,091	1	.	T	94.2%	612.8 / 19.5	172	intergenic (‑1/‑277)	pth/ychH	aminoacyl‑tRNA hydrolase/stress‑induced protein YchH
Reads supporting (aligned to +/- strand): ref base . (3/7); new base T (70/92); total (73/99)
Fisher's exact test for biased strand distribution p-value = 5.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch.

Only 100 of 180 total aligned reads displayed.

ATCGCCGCAACGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACTTTACACATAAGGAAGA  >  NC_007779/1259858‑1260324

  cgccgcAACGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑tttttt‑t                                                                                                                                                                                                                                    >  1:847974/1‑239 (MQ=255)

  cgccgcAACGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑tttttt‑t                                                                                                                                                                                                                                    <  1:868751/239‑1 (MQ=255)

        aaCGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑tttttt‑ttgtcc                                                                                                                                                                                                                               <  1:621969/238‑6 (MQ=255)

        aaCGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑tttttt‑ttgtcc                                                                                                                                                                                                                               <  1:1692303/238‑6 (MQ=255)

        aaCGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑tttttt‑ttgtcc                                                                                                                                                                                                                               <  2:1793043/238‑6 (MQ=255)

          cGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGa                                                                                                                                                                                                                             <  1:1593430/239‑1 (MQ=255)

           ggCTTTGCCGCTGAGATTCATAAATGTAGGCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAg                                                                                                                                                                                                                            <  2:1085407/239‑1 (MQ=255)

                             cATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGgcgc                                                                                                                                                                                                          >  1:1342050/1‑239 (MQ=255)

                             cATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGgcgc                                                                                                                                                                                                          >  1:319539/1‑239 (MQ=255)

                              ataaagggtgTCGGGGCTAACAGGCGGACAGCTTCCCCTCCAAGGGTGACTCGGGAAGTATAACACAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCAAGTAAGTCAACGACCCAGGCAGCAGCATTATGTCGCTTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCCCGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGagcg                                                                                                                                                                                                         <  2:1112872/230‑1 (MQ=255)

                              aTAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGTTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGcgcg                                                                                                                                                                                                         <  1:145555/239‑1 (MQ=255)

                              aTAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGcgcg                                                                                                                                                                                                         <  2:525233/239‑1 (MQ=255)

                                    gTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGACGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGttt                                                                                                                                                                                                   >  2:199647/1‑239 (MQ=255)

                                       gTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGCAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGTAGCGCGCAAACGCTCTGCCAGTAAGTCAAAGAACCACGCACCAGCGTTATGTCTCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGCGTGCGTACATCAGTGGCGCGTAGttt                                                                                                                                                                                                   >  2:14959/1‑236 (MQ=255)

                                       gTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGttt                                                                                                                                                                                                   >  1:288192/1‑236 (MQ=255)

                                        tCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGTCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTg                                                                                                                                                                                               >  1:516139/1‑239 (MQ=255)

                                        tCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCt                                                                                                                                                                                                                               >  1:1757239/1‑207 (MQ=255)

                                        tCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCt                                                                                                                                                                                                                               <  2:1757239/207‑1 (MQ=255)

                                                 aCAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAAAGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGGGTACCTAACTGGCGCGTAGTTTACTGGTTGCCGc                                                                                                                                                                                       >  2:1356106/1‑238 (MQ=255)

                                                      cGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCt                                                                                                                                                                                 >  1:1221382/1‑239 (MQ=255)

                                                       ggACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGTTTTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCt                                                                                                                                                                                 <  1:789592/239‑1 (MQ=255)

                                                       ggACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCt                                                                                                                                                                                 <  1:1244211/238‑1 (MQ=255)

                                                       ggACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGGCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCt                                                                                                                                                                                 <  2:288192/238‑1 (MQ=255)

                                                                   cTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACt                                                                                                                                                                     >  2:638096/1‑238 (MQ=255)

                                                                   cTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACt                                                                                                                                                                     >  2:1156174/1‑238 (MQ=255)

                                                                    tCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGc                                                                                                                                                                   <  2:1008701/239‑1 (MQ=255)

                                                                      cAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGt                                                                                                                                                                 >  1:724431/1‑239 (MQ=255)

                                                                        agagTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTAt                                                                                                                                                               <  1:828271/239‑1 (MQ=255)

                                                                             gACTCGCGAAGTATAACCAAAGAATTTAGCCTCCTCGCGCACCGGAGCGCGACAACGCTCTGCCAGTAAGCCACCAAACCAGGCACCAGCTTTCTGTCGCGTCGCGGCGTATTCCGCACCGGGGTTCGCCAGGCCGACCATCAATTTAATCGTGCCGT‑TTTTTT‑TGTCCTGAGTGCGTACATAACGGGCGCGTAAGTTACTGGTTGGGGGCCGGCTTGACACAAAACTGGCTCTCaaaa                                                                                                                                                          >  2:1556114/1‑238 (MQ=255)

                                                                              aCTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGtt                                                                                                                                                                                            >  2:294685/1‑203 (MQ=255)

                                                                              aCTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGc                                                                                                                                                        >  1:1348246/1‑239 (MQ=255)

                                                                               cTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGc                                                                                                                                                        >  2:1611207/1‑239 (MQ=255)

                                                                                  gcgAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGa                                                                                                                                                     <  1:1033416/239‑1 (MQ=255)

                                                                                  gcgAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGa                                                                                                                                                     <  1:23/239‑1 (MQ=255)

                                                                                    gAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGAt                                                                                                                                                    <  2:648264/238‑1 (MQ=255)

                                                                                    gAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGGATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGAt                                                                                                                                                    <  1:612669/238‑1 (MQ=255)

                                                                                      aGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACg                                                                                                                                                <  2:1348246/239‑1 (MQ=255)

                                                                                                        aGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGgcgc                                                                                                                                                                                                          <  2:615810/164‑1 (MQ=255)

                                                                                                             ctTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTa                                                                                                                          >  1:1516665/1‑239 (MQ=255)

                                                                                                             ctTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTa                                                                                                                          >  1:598681/1‑239 (MQ=255)

                                                                                                                        ggAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCa                                                                                                               <  2:520243/239‑1 (MQ=255)

                                                                                                                           gcgcgcAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAg                                                                                                             <  2:1912842/238‑1 (MQ=255)

                                                                                                                            cgcgcAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGgt                                                                                                           >  1:1904194/1‑239 (MQ=255)

                                                                                                                                 aaaCGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCa                                                                                                      <  1:162038/239‑1 (MQ=255)

                                                                                                                                                aaGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTa                                                                                        <  1:725779/238‑1 (MQ=255)

                                                                                                                                                aaGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTa                                                                                        <  1:1611207/238‑1 (MQ=255)

                                                                                                                                                aaGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTAGTAGAAATTCAAGGTGTTCAGGCGTTTATTTGTa                                                                                        <  1:1301321/238‑1 (MQ=255)

                                                                                                                                                     aaCGAACCCGGCACCAGCATTATGTCGCGTTGCGGCGTATTCTGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTCCGGCCCCGCTTGCCCATAAACTGCGTAGCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGGAAGCAAAGGTGTTGGGGCGTTTATTTGAAACGttt                                                                                  >  2:1943749/1‑239 (MQ=255)

                                                                                                                                                     aaCGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGttt                                                                                  >  1:1633254/1‑239 (MQ=255)

                                                                                                                                                       cGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTttg                                                                                <  1:242083/239‑1 (MQ=255)

                                                                                                                                                        gAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTttgt                                                                               <  1:199647/239‑1 (MQ=255)

                                                                                                                                                          aCCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTttgtt                                                                              <  1:1156174/238‑1 (MQ=255)

                                                                                                                                                             aGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGaaa                                                                          >  1:1794436/1‑239 (MQ=255)

                                                                                                                                                                cACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCTCCAGGCCGACAATCAATTTAATCGTCTCGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAAt                                                                         <  1:300648/237‑1 (MQ=255)

                                                                                                                                                                cACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTATGTACATCACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATa                                                                        <  2:439231/238‑1 (MQ=255)

                                                                                                                                                                 aCCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAg                                                                      <  2:1683343/239‑1 (MQ=255)

                                                                                                                                                                 aCCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAg                                                                      <  1:1390369/239‑1 (MQ=255)

                                                                                                                                                                    aGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGt                                                                   >  2:1599565/1‑239 (MQ=255)

                                                                                                                                                                          aTGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAAt                                                             >  1:1914474/1‑239 (MQ=255)

                                                                                                                                                                             tCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGTTTGCGGCCCCGCTTGACAAAAAACTGCGTAt                                                                                                                                                               <  2:907465/138‑1 (MQ=255)

                                                                                                                                                                             tCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTAt                                                                                                                                                               >  1:907465/1‑138 (MQ=255)

                                                                                                                                                                                cgTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTAt                                                                                                                                                               >  1:784791/1‑135 (MQ=255)

                                                                                                                                                                                cgTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAg                                                                                                                                 <  2:464021/165‑1 (MQ=255)

                                                                                                                                                                                cgTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAg                                                                                                                                 >  1:464021/1‑165 (MQ=255)

                                                                                                                                                                                cgTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGa                                                        >  2:1882017/1‑238 (MQ=255)

                                                                                                                                                                                cgTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGa                                                        >  2:131597/1‑238 (MQ=255)

                                                                                                                                                                                 gTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTATAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGAt                                                       <  2:319539/238‑1 (MQ=255)

                                                                                                                                                                                  ttGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTa                                                                                                                                                                                                                      <  1:860755/78‑1 (MQ=255)

                                                                                                                                                                                  ttGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTa                                                                                                                                                                                                                      >  2:860755/1‑78 (MQ=255)

                                                                                                                                                                                     cggcgTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACg                                                   >  2:98076/1‑238 (MQ=255)

                                                                                                                                                                                      ggcgTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGcc                                                 <  1:92682/239‑1 (MQ=255)

                                                                                                                                                                                      ggcgTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGc                                                  <  1:1052451/238‑1 (MQ=255)

                                                                                                                                                                                        cgTATTCAGCACCGGTGTTCGCCAGGCCTACAATCAATTTGATCGTCACG‑‑TTTTTTATGTCCTGAGTGTGTACATAACTTGCGCGTAGTTTACTGGCTGCGGCCCCGCTTGACAAAAAACTGCGGATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTGCAGGCGTCTATTTGTAAAGTTTTGTTGAAATAAGCGTTGTAATTGTGCTCACGcct                                                <  2:724431/238‑2 (MQ=255)

                                                                                                                                                                                               aGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAg                                                                                                             <  2:945713/170‑1 (MQ=255)

                                                                                                                                                                                               aGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAg                                                                                                             >  1:945713/1‑170 (MQ=255)

                                                                                                                                                                                                  aCCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATaa                                        <  1:1332472/236‑1 (MQ=255)

                                                                                                                                                                                                  aCCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAAc                                       <  1:225988/237‑1 (MQ=255)

                                                                                                                                                                                                    cGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCTCGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGc                                                                                                                                                        >  2:305480/1‑122 (MQ=255)

                                                                                                                                                                                                    cGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGc                                                                                                                                                        <  1:305480/122‑1 (MQ=255)

                                                                                                                                                                                                    cGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCAc                                   <  1:976209/239‑1 (MQ=255)

                                                                                                                                                                                                     ggggTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACt                                  <  1:538782/239‑1 (MQ=255)

                                                                                                                                                                                                      gggTTCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTg                                 >  1:1219718/1‑239 (MQ=255)

                                                                                                                                                                                                         ttCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACAt                                          >  2:846012/1‑227 (MQ=255)

                                                                                                                                                                                                          tCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCGGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGgt                              <  1:1943749/238‑1 (MQ=255)

                                                                                                                                                                                                          tCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGgt                              <  1:1854843/238‑1 (MQ=255)

                                                                                                                                                                                                          tCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGgt                              <  2:598681/238‑1 (MQ=255)

                                                                                                                                                                                                          tCGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGgt                              <  2:1221382/238‑1 (MQ=255)

                                                                                                                                                                                                           cGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGt                                                                                                                                <  2:788412/139‑1 (MQ=255)

                                                                                                                                                                                                           cGCCAGGCCGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGgtgt                            >  1:1077624/1‑239 (MQ=255)

                                                                                                                                                                                                                  ccGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCGCGCCCGCACATAACCCACTGGGTGTTGTCt                       <  2:734702/237‑1 (MQ=255)

                                                                                                                                                                                                                  ccGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCta                      <  1:1373389/238‑1 (MQ=255)

                                                                                                                                                                                                                  ccGACAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCt                       <  1:638096/237‑1 (MQ=255)

                                                                                                                                                                                                                     aCAATCAATTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACt                  >  1:598258/1‑239 (MQ=255)

                                                                                                                                                                                                                      caagcaatTTAATCGTCACGT‑TTTTTT‑TGTCCGGAGTGGGTACATAACTGGCTCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACtt                 <  2:1359340/239‑1 (MQ=255)

                                                                                                                                                                                                                        atcaatTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACTTTa               <  2:547958/239‑1 (MQ=255)

                                                                                                                                                                                                                         tcaatTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACTTTac              <  1:1556114/239‑1 (MQ=255)

                                                                                                                                                                                                                         tcaatTTAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACTTTac              <  1:1188062/239‑1 (MQ=255)

                                                                                                                                                                                                                             tttAATCGTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACTTTACACAt          >  2:1659078/1‑239 (MQ=255)

                                                                                                                                                                                                                              ttAATCGTCAAGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTCGTTTACTGGTTGCGGACTCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGTCTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGGAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACGGGGTGTTGTCTATACTTGACACATa         <  1:1497451/239‑1 (MQ=255)

                                                                                                                                                                                                                                    gTCACGT‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACTTTACACATAAGGAag   <  2:1249653/239‑1 (MQ=255)

ATCGCCGCAACGGCTTTGCCGCTGAGATTCATAAATGTAGTCGGGACTAACAGGCGGACATCTTCGCCTCCAAGAGTGACTCGCGAAGTATAACCAAAGAATTTAGCCTCTTCGCGCAGCGGAGCGCGCAAACGCTCTGCCAGTAAGTCAACGAACCAGGCACCAGCATTATGTCGCGTTGCGGCGTATTCAGCACCGGGGTTCGCCAGGCCGACAATCAATTTAATCGTCACG‑‑TTTTTT‑TGTCCTGAGTGTGTACATAACTGGCGCGTAGTTTACTGGTTGCGGCCCCGCTTGACAAAAAACTGCGTATCAAATGCAGATAACGTAATAATTGCCTGAGTGGACTATTAGAAAGTCAAGGTGTTCAGGCGTTTATTTGTAAAGTTTTGTTGAAATAAGGGTTGTAATTGTGATCACGCCCGCACATAACCCACTGGGTGTTGTCTATACTTTACACATAAGGAAGA  >  NC_007779/1259858‑1260324

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`