BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,273,404	A→T	21.2%	V8E (GTA→GAA)	chaA ←	sodium‑potassium/proton antiporter ChaA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,273,404	0	A	T	21.2%	316.9 / 35.1	134	V8E (GTA→GAA)	chaA	sodium‑potassium/proton antiporter ChaA
Reads supporting (aligned to +/- strand): ref base A (3/102); new base T (27/2); total (30/104)
Fisher's exact test for biased strand distribution p-value = 1.05e-22
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 135 total aligned reads displayed.

ACTGACTTCAAGAATAACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCA  >  NC_007779/1273166‑1273641

  tGACTTCAAGAATAACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTAcc                                                                                                                                                                                                                                                   <  1:191589/239‑1 (MQ=255)

  tGACTTCAAGAATAACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTAcc                                                                                                                                                                                                                                                   <  1:1638438/239‑1 (MQ=255)

  tGACTTCAAGAATAACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTAcc                                                                                                                                                                                                                                                   <  1:1445720/239‑1 (MQ=255)

  tGACTTCAAGAATAACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTAcc                                                                                                                                                                                                                                                   <  1:1274817/239‑1 (MQ=255)

             aTAACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAg                                                                                                                                                                                                                                         <  1:859512/238‑1 (MQ=255)

                acccttGAAAGGTTAAGAAAAAGCGAACCGTAAGGTCAGCCCAGGCGATGGGCTAATACGTCCGCATGACGGAAAACACTAAAGGCGCTCCTTAAAATACCAAAAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGACCCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCAtt                                                                                                                                                                                                                                     <  2:337219/234‑1 (MQ=255)

                aCCACTGTAAGGCGAAGAATAAGCGAACTGTAAGATTCACCCAGGCGATGTGGTAATACTGCGGCATGACGGACAACACTAAAGGCGCTACTTAAAATCACAATAAGCTCAAGAAAATTGATGGCAATGACCCCTGGTAGTGTCTGTGTGCTCCCCCACAGGAATAGCGCTACCGGCGCCAGAACCGGCAAAATAAGCGAGGGCTCCTTGTGGCGGGTTTTTTCCGCCTCTTGAGCAtt                                                                                                                                                                                                                                     <  2:1792458/239‑1 (MQ=255)

                aCCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCCCAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCAtt                                                                                                                                                                                                                                     <  2:101332/239‑1 (MQ=255)

                aCCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTGCGccgcctggggagt                                                                                                                                                                                                                                     >  1:1081284/1‑228 (MQ=255)

                 ccACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCAttt                                                                                                                                                                                                                                    <  1:408508/239‑1 (MQ=255)

                     tGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACa                                                                                                                                                                                                                                <  1:1209889/239‑1 (MQ=255)

                     tGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTAGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACa                                                                                                                                                                                                                                <  2:377289/239‑1 (MQ=255)

                        aaGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCCCTGGTAGTGGCTGGCTGCTTCCCCCCGGGAACAGCACTACCAGCGCAAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGTGTTTTTACCGCCTCTTGAGCATTTGACAtt                                                                                                                                                                                                                              <  2:1327943/238‑1 (MQ=255)

                        aaGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACAtt                                                                                                                                                                                                                              <  1:1064896/238‑1 (MQ=255)

                            cTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGCTGTTTTTGCCTCTTTTGCAtttttgattattgt                                                                                                                                                                                                                         >  1:70884/1‑228 (MQ=255)

                             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGt                                                                                                                                                                                                                        <  1:671394/238‑1 (MQ=255)

                             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGt                                                                                                                                                                                                                        <  2:1075264/238‑1 (MQ=255)

                             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGt                                                                                                                                                                                                                        <  1:786888/238‑1 (MQ=255)

                             tAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGt                                                                                                                                                                                                                        <  1:190920/238‑1 (MQ=255)

                                 aaTAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTg                                                                                                                                                                                                                                           <  1:520727/216‑1 (MQ=255)

                                                      tcCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTAc                                                                                                                                                                                                                                                    <  2:1003398/186‑1 (MQ=255)

                                                      tcCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTAc                                                                                                                                                                                                                                                    >  1:1003398/1‑186 (MQ=255)

                                                      tcCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCGCCTCCTGGGCAGTTTACATTAT‑GGTTATTCCTTTTCAGA‑T‑GAATTTATCGa                                                                                                                                                                                            >  1:719539/1‑239 (MQ=255)

                                                        ccAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGaaa                                                                                                                                                                                          <  2:1895466/239‑1 (MQ=255)

                                                              gATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAAGAAGCGCAAGAAGATTGATGGAAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTTTCCTGGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑a                                                                                                                                                                                    <  2:1706643/238‑1 (MQ=255)

                                                                  ggCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCCCTTTTTGATTTTTCTATTT‑TGTTATTCCTTTTCTGA‑T‑GAAATTATTGAAAATAT‑aaaaaa                                                                                                                                                                               >  1:285529/1‑239 (MQ=255)

                                                                  ggCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTAACCCCCCTTGAGCATTTTTCATTAT‑TGTTTTTCCTTTTCCGA‑T‑GAAATTATTGAAAATGG‑aaaaaa                                                                                                                                                                               >  1:778387/1‑239 (MQ=255)

                                                                        tACGTCCGCATGACGGACAACACTAAGGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGGTTTTTCCCCTCTTTAGCATTTTTCAATAT‑TGTTTTTCCTTTTTAGG‑T‑GAATTTTTTTAAAAAGT‑aaaaaaaaagga                                                                                                                                                                         >  1:202472/1‑233 (MQ=255)

                                                                          cGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAAtaggtagg                                                                                                                                                                       <  1:1947470/239‑1 (MQ=255)

                                                                             ccGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCTTTGGCATTTTAAATTTT‑TGGTTTTCCTTTTCAGATT‑GAATTTTTTAAAAATTT‑AAAAAAAAGGAGGGaa                                                                                                                                                                     >  1:1717674/1‑239 (MQ=255)

                                                                                 aTGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAAt                                                                                                                                                                 <  2:1828482/238‑1 (MQ=255)

                                                                                       gACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGGTTTTCCACCCCCTGAGGAACTGGAATTAT‑TGTTTTTCCTTTGTAGA‑T‑TAAGTTTTTGAAAATGT‑TAAAAATAAGTAAGaaaaaaaaaaaaa                                                                                                                                                          >  2:996872/1‑234 (MQ=255)

                                                                                       gACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAAAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGa                                                                                                                                                           <  2:1880510/238‑1 (MQ=255)

                                                                                        acaacaCTAAGGTAGCTCATTATAATACCACTAAGCGCAAGAGAATTGATGGACATGACCACTGGTAGTGTCTGGCTGATTCCCCACGGGACCAGCACTACCCGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGTTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGaaa                                                                                                                                                         <  2:1264138/239‑1 (MQ=255)

                                                                                        acaacaCTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGa                                                                                                                                                           <  2:1902181/237‑1 (MQ=255)

                                                                                                  aGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGat                                                                                                                                              <  1:543224/239‑1 (MQ=255)

                                                                                                     cgcTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGatat                                                                                                                                            <  1:1585797/238‑1 (MQ=255)

                                                                                                       cTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCTTTTGCATTTTTCATTAT‑TGTTTTCCCTTTTCTGA‑G‑GAATTTTTTGAAAATGT‑AAAAAAAAAGGAGGAAAAAAAACAAAAAAA‑GTCTGGGTATCgg                                                                                                                                         >  1:820882/1‑239 (MQ=255)

                                                                                                       cTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCTTTTGCATTTTACATTTT‑TGTTTTTCCTTTTCAGA‑T‑GAATTTTTTTAAAAAGT‑AAAAAAAAAGTAGGGAAAAAAAAAGAAAAA‑GTCTGGATATCgg                                                                                                                                         >  1:998567/1‑239 (MQ=255)

                                                                                                       cTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCTTTCGCATTTTACATTAT‑TGTTTTTCCCTTTCCGA‑T‑GAATTTTTTTAAAAAAT‑AAAAAAAAAGGAGGAAAAAAAAAAAAAAAA‑GTCTGGATATAgg                                                                                                                                         >  1:1036829/1‑239 (MQ=255)

                                                                                                       cTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGATTTTTTCCCCACCTTGCGCATTTTTGATTTTGGGTTTTTCCTTT‑CCGT‑A‑GAATTTTTTTAAAATAT‑AAAAAAAAAGAAGGGAAAAAAACAAAAACG‑GTCTggcttatcg                                                                                                                                         >  1:776989/1‑232 (MQ=255)

                                                                                                        tACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGt                                                                                                                                        <  1:207749/239‑1 (MQ=255)

                                                                                                          cTTAAAATACCAAGAAGCGCAGCAAAATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGa                                                                                                                                                           <  2:1863653/219‑1 (MQ=255)

                                                                                                                   ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACg                                                                                                                             <  1:672752/239‑1 (MQ=255)

                                                                                                                   ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACg                                                                                                                             <  1:1236454/239‑1 (MQ=255)

                                                                                                                   ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACg                                                                                                                             <  1:230003/239‑1 (MQ=255)

                                                                                                                   cacaTAAGGGCAAAACAATGGATGGCAATAACCACGGGTAGTGTCTGGCAGCTCCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGGCTCCTGGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTAGCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACg                                                                                                                             <  2:30049/236‑1 (MQ=255)

                                                                                                                    cAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCTCTTGAGCATTTTACATTCT‑GGGTTTACCTTTGCAGG‑T‑TGAATTATCTAAAAAAT‑AAAAAAAAGGTAGGAAAAATAAAAAAAAAA‑GTCTGGATAACGGTAACATTTTAAGa                                                                                                                            >  1:601273/1‑239 (MQ=255)

                                                                                                                    cAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCTTTTGCATTTTTTATTAT‑GGTTTTTCCTTTTCCGA‑TGGAATTTTTTAAAAAATA‑AAAAAAAAGGAAGGAAAAA‑AAAAAAAAAA‑GTCTTGGTATTGGTAAAAatttttga                                                                                                                            >  1:1855666/1‑235 (MQ=255)

                                                                                                                    cAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCTCCTGAGGATTTTTCATTTT‑GGTTTTCTCCTTTCCGA‑T‑GAAATTTTTGAAAATGT‑AAAAAAAAAGTAGGAAAAAAAAAAAAAAAT‑AGCTGGATATCGGTAAAAATTTaata                                                                                                                            >  1:1653321/1‑236 (MQ=255)

                                                                                                                              aagaagATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGGTTTTTCCCCCCTTTTGCATTTTTCATTTT‑TGTTTTTCCTTTTCCGA‑T‑GAATTTTTTTAAAAAGTAAAAAAAAAGGAGGGAAAAAAAAAAAAAAGT‑‑TCTGGGTATTGGTAAAAATTTACTAAttttttac                                                                                                                   >  1:516347/1‑235 (MQ=255)

                                                                                                                                  agaTTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTCCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCg                                                                                                                <  1:609293/237‑1 (MQ=255)

                                                                                                                                  agaTTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCg                                                                                                                <  2:1838437/237‑1 (MQ=255)

                                                                                                                                  agaTTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCg                                                                                                                <  1:873347/237‑1 (MQ=255)

                                                                                                                                     ttGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCGCCCCTTTGGCCTTTTACATTAT‑TGTTTTCCCTTTTGCGA‑T‑GAATTTATCGAAAAAGT‑AAAAAAAAAGAAGGGAAAAAAAAAAAAAAA‑GTTTGGGTATAGGGAAAATTTTTTGAAtttttttccccccgg                                                                                                            >  1:1571133/1‑228 (MQ=255)

                                                                                                                                             aaTGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGAttttt                                                                                                    <  1:1821770/238‑1 (MQ=255)

                                                                                                                                              aTGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTa                                                                                                  <  1:1258289/239‑1 (MQ=255)

                                                                                                                                              aTGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTa                                                                                                  <  1:553712/239‑1 (MQ=255)

                                                                                                                                                   cACTGGTAGGGCCGGGCTGATTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCGTGTGGCGTGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCAt                                                                                             <  2:58303/239‑1 (MQ=255)

                                                                                                                                                     cttgtggtttCTGGCTGTTTCCCCACGGGAAAGGCTATTCCATGGCCAGAACCGGGAAAAAAAGCGAAGTCCCTTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTg                                                                                           <  2:1516335/230‑1 (MQ=255)

                                                                                                                                                          aGTGTCTGGCTGCTTCCCCACAGGAACCGCCCTACCAGCGCCAGAACCGGTAAAATAGGCGAAGTCTCCTTGTGGCGGGTTTTAACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑a                                                                                     <  1:702364/239‑1 (MQ=255)

                                                                                                                                                            tgtCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGAGGCGGGGTTTTTCCGCCCCCTTAGCATTTGGCATTTT‑GGTTATCCCTTTTCAGA‑T‑GAATTTATCCAAAAAGT‑AAAAAATAAGGAGGGAAAATAACAGAAAGG‑ATTTGGGTATCCGGAAAATTTTAAGAATTTTTTCCCCCCTGTTCACTTTTTTCTCATTCGGGG‑ATa                                                                                   >  1:607727/1‑239 (MQ=255)

                                                                                                                                                             gtCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑At                                                                                    <  1:409076/237‑1 (MQ=255)

                                                                                                                                                             gtCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATa                                                                                   <  1:1222649/238‑1 (MQ=255)

                                                                                                                                                                tGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTGTTTTCTCCCCTTTAGCATTTGTCATTTT‑TGTTTTTCCCTTTCCGA‑T‑GTATTTTTTTAAAAATT‑AAAAAAAAAGTAAGAAAAAAAAAAAAAAATGGTATGGTAAAGGGTAAAATTTTAGAAATTTTTACACCCCGTTGTATTTTTTA‑TCATTTGGGCGATaaaa                                                                                >  2:1222649/1‑239 (MQ=255)

                                                                                                                                                                 ggCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAAt                                                                              <  1:1492249/239‑1 (MQ=255)

                                                                                                                                                                 ggCTGCTTACCCACAGGAGCAGCACGACCAGCGCCAGAACCGGAAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAAt                                                                              <  1:1684157/239‑1 (MQ=255)

                                                                                                                                                                  gctgctTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAAt                                                                              <  1:328179/238‑1 (MQ=255)

                                                                                                                                                                  gctgctTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAAt                                                                              <  1:1730272/238‑1 (MQ=255)

                                                                                                                                                                   ctgctACCCCCCCGTAACAACCATACCATCACCAGAACCGGGAAAATAAGCGAAGTTTTCTTGTGGCGGTTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAATT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATaa                                                                            <  2:1757166/239‑1 (MQ=255)

                                                                                                                                                                       ttCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTAt                                                                        <  1:1213200/239‑1 (MQ=255)

                                                                                                                                                                       tgccccccAGAAAAAGCCCTCCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTAt                                                                        <  2:1839696/237‑1 (MQ=255)

                                                                                                                                                                       tcccccACAAGAACAGCGCTCACAGCGCCAGAACCTGAAAAATAAGCGAAGTCGCCTTGTGGGGGGTTTTTACCGCATCTTGAGCATTTGACATTAT‑GGTTATCCATTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTAt                                                                        <  2:670487/237‑1 (MQ=255)

                                                                                                                                                                       tcacccACAGGAACTGCGTTACCAGCGCAAGAACCGGAAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTGACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTAt                                                                        <  2:1830680/236‑1 (MQ=255)

                                                                                                                                                                            cacaGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGt                                                                   <  1:336226/239‑1 (MQ=255)

                                                                                                                                                                             gcgggAACAGATGTACCATCGCCAGAACCGGAAAAATACTCTATGTACACTTGTTGCGGGTTTTTACCGCCTCTTGAGCATTTTACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATCTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTGTTTACTCATTGTGGC‑ATAAAAATAAGTATTACGtt                                                                  <  2:1097949/236‑1 (MQ=255)

                                                                                                                                                                                   aCAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACa                                                            <  1:29998/239‑1 (MQ=255)

                                                                                                                                                                                       cACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGa                                                                                                                                                           <  1:268972/142‑1 (MQ=255)

                                                                                                                                                                                       cACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCCCCTTAGCCTTTTTCATTTT‑TGTTTTTCCTTTTCAGA‑T‑GGATTTTTTCCAAAAGT‑AAAAAAAAAGTAGGGAAAAAAAAAGAAAAA‑GTCTGGGTATTGGTAAAATATTTTTAATTTTTTTTCCCCCGTCGATTTTTTTTTTATTTGGGC‑ATAAAAAAAAATATTACGTTTTGACAAagt                                                        >  1:926371/1‑239 (MQ=255)

                                                                                                                                                                                       cACTACCAGCGCCAAAACCGGGAAAATATGCGAAGTCTCCTTGTGGCTGGTTTTTACCGCCTCTTGAACATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTTCCCTGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAAtgt                                                        <  2:1081284/239‑1 (MQ=255)

                                                                                                                                                                                        aCTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAAtgt                                                        <  2:30246/238‑1 (MQ=255)

                                                                                                                                                                                                 gccgtgaCCGGGAGATAACGCGATGTCCCATTATGGGTGGTTTTGACCGCCTGTTGAGCATTTGACAGTAT‑GGTTATCCCTGTGCAGA‑T‑TAATTGAACTAAAGACT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTTACATTTGACGAATTCTTACCTCGCTGTCGAGATTTTACTCATTGGCGC‑AAAAAAATAATTATTACGGTTACCCAATGTTTGTTATAGc                                              <  2:296657/233‑1 (MQ=255)

                                                                                                                                                                                                 gcCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGc                                              <  1:1855779/239‑1 (MQ=255)

                                                                                                                                                                                                 gcCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGc                                              <  1:700499/239‑1 (MQ=255)

                                                                                                                                                                                                 gcCAGAACCGGGAAAAAAAGGGTAGCCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGc                                              <  2:1571133/239‑1 (MQ=255)

                                                                                                                                                                                                   cAGAACCGGGAAAATAAGGGAGGTCTCCTGGTGGCGTGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                            <  2:607727/239‑1 (MQ=255)

                                                                                                                                                                                                   cAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAGAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                            <  1:330753/239‑1 (MQ=255)

                                                                                                                                                                                                   cAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                            <  2:202472/239‑1 (MQ=255)

                                                                                                                                                                                                   cAGAACCGGGAAAAGAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                            <  1:1354840/239‑1 (MQ=255)

                                                                                                                                                                                                       aCCGGGAAAATAAGCGAAGTCTCCTTTTGGCGGTTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTctct                                        <  2:535190/239‑1 (MQ=255)

                                                                                                                                                                                                        ccGGGAAAATAAGCGAATTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCtt                                       <  1:95288/239‑1 (MQ=255)

                                                                                                                                                                                                             aataTAAGTGAAGTCCCCTTGTTGCGGGTTTTTTCCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCATA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGCAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTTTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTCCGTTTAGACAATGTTTGTTTTAGCGTCTCTTaaga                                   <  1:550332/235‑1 (MQ=255)

                                                                                                                                                                                                             aaaaTAAGCGAATTCTCCTTGTGGGGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTaaga                                   <  2:926371/238‑1 (MQ=255)

                                                                                                                                                                                                                      gaattgtcCTTGGTGGGGGTTGTTACCGCCTCTTGAGCATTGGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAACTAACCGAAAGG‑GTCTGGATATCGGTAACATTTTAGGAATTTTTTTCGCGCTGTCGATTTTTTACTCATTCGGGC‑ATAAAAATAAGTATTACGTTTAGACCATGTTTGTTTCAGCGTCTCTTAAGCATAGTCTgtc                         <  2:1863340/233‑3 (MQ=255)

                                                                                                                                                                                                                           ctcCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGa                     <  1:388455/238‑1 (MQ=255)

                                                                                                                                                                                                                           ctcCTTGTGGAGGGTTTTTACCGTCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTTCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATATCAGTATGT‑GTCTGGATCTCGGTAACAATTTACGAATTTTTCCGCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATCACTTTTACACAATGTTTGTTTTAGCGTCTCTTAAGATGAGTCTGACCTGa                     <  2:70884/238‑1 (MQ=255)

                                                                                                                                                                                                                            tcCTTGTTGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAAAGT‑AAAAAATAGGTAGGAAAAATAACAGGAAGT‑GTAGAGATATCGGTAAGCTTTTTCGCATTTTTACCCCGCTGTCGAGTTTTTACTCATTCGGGC‑ATAAAAATAAGTAGTACGTTTAGACAATGTTTGTTTTAGCGTTTCTTAAGAAGAGGCTGACTTGaaa                   <  2:719539/239‑1 (MQ=255)

                                                                                                                                                                                                                                           tttACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTgg    <  2:1717674/239‑1 (MQ=255)

                                                                                                                                                                                                                                            ttACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGc   <  2:1093782/239‑1 (MQ=255)

                                                                                                                                                                                                                                             tACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTTGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCa  <  2:421330/239‑1 (MQ=255)

ACTGACTTCAAGAATAACCACTGAAAGGCTAAGAATAAGCGAACCGTAAGGTTCTCCCAGGCGATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTAT‑GGTTATCCCTTTGCAGA‑T‑GAATTTATCGAAAATGT‑AAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCA  >  NC_007779/1273166‑1273641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`