BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,273,462	T→A	8.7%	intergenic (‑36/‑234)	chaA ← / → chaB	sodium‑potassium/proton antiporter ChaA/putative cation transport regulator ChaB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,273,462	0	T	A	8.7%	615.9 / 5.2	182	intergenic (‑36/‑234)	chaA/chaB	sodium‑potassium/proton antiporter ChaA/putative cation transport regulator ChaB
Reads supporting (aligned to +/- strand): ref base T (44/120); new base A (16/2); total (60/122)
Fisher's exact test for biased strand distribution p-value = 3.66e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 182 total aligned reads displayed.

GATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATG  >  NC_007779/1273228‑1273698

  tGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATACGCGAAGTCTCCTTGTGGCGGGGCTTTTCCGCCCCTCTAGCAATTGACAATATTGTTATCCCCTTTCAGATAAAATTTTATAAAAAGAaaaa                                                                                                                                                                                                                                          >  1:700836/1‑239 (MQ=255)

    ggCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCCCTTTTTGATTTTTCTATTTTGTTATTCCTTTTCTGATGAAATTATTGAAAATATaaaaaa                                                                                                                                                                                                                                        >  1:285529/1‑239 (MQ=255)

    ggCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTAACCCCCCTTGAGCATTTTTCATTATTGTTTTTCCTTTTCCGATGAAATTATTGAAAATGGaaaaaa                                                                                                                                                                                                                                        >  1:778387/1‑239 (MQ=255)

            cGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAAtaggtagg                                                                                                                                                                                                                                <  1:1947470/239‑1 (MQ=255)

                        ggACAACTCTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGGTGGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACGGCACTACAAGCGCCAGAGCCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCATCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGa                                                                                                                                                                                                                    <  2:126738/239‑1 (MQ=255)

                         gACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGGTTTTCCACCCCCTGAGGAACTGGAATTATTGTTTTTCCTTTGTAGATTAAGTTTTTGAAAATGTTAAAAATAAGTAAGaaaaaaaaaaaaa                                                                                                                                                                                                                   >  2:996872/1‑234 (MQ=255)

                         gACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAAAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGa                                                                                                                                                                                                                    <  2:1880510/238‑1 (MQ=255)

                          acaacaCTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGa                                                                                                                                                                                                                    <  2:1902181/237‑1 (MQ=255)

                               acTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACGGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGGGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTc                                                                                                                                                                                                            <  1:450967/239‑1 (MQ=255)

                                       cgcTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGatat                                                                                                                                                                                                     <  1:1585797/238‑1 (MQ=255)

                                         cTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCTTTTGCATTTTTCATTATTGTTTTCCCTTTTCTGAGGAATTTTTTGAAAATGTAAAAAAAAAGGAGGAAAAAAAACAAAAAAA‑GTCTGGGTATCgg                                                                                                                                                                                                  >  1:820882/1‑239 (MQ=255)

                                         cTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTTCCCCCCTTTCGCATTTTACATTATTGTTTTTCCCTTTCCGATGAATTTTTTTAAAAAATAAAAAAAAAGGAGGAAAAAAAAAAAAAAAA‑GTCTGGATATAgg                                                                                                                                                                                                  >  1:1036829/1‑239 (MQ=255)

                                                     ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACg                                                                                                                                                                                      <  1:672752/239‑1 (MQ=255)

                                                     ccAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACg                                                                                                                                                                                      <  1:230003/239‑1 (MQ=255)

                                                     cacaTAAGGGCAAAACAATGGATGGCAATAACCACGGGTAGTGTCTGGCAGCTCCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGGCTCCTGGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTAGCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACg                                                                                                                                                                                      <  2:30049/236‑1 (MQ=255)

                                                      cAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCTCCTGAGGATTTTTCATTTTGGTTTTCTCCTTTCCGATGAAATTTTTGAAAATGTAAAAAAAAAGTAGGAAAAAAAAAAAAAAAT‑AGCTGGATATCGGTAAAAATTTaata                                                                                                                                                                                     >  1:1653321/1‑236 (MQ=255)

                                                                    agaTTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTCCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCg                                                                                                                                                                         <  1:609293/237‑1 (MQ=255)

                                                                    agaTTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCg                                                                                                                                                                         <  1:873347/237‑1 (MQ=255)

                                                                    agaTTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCg                                                                                                                                                                         <  2:1838437/237‑1 (MQ=255)

                                                                               aaTGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGAttttt                                                                                                                                                             <  1:1821770/238‑1 (MQ=255)

                                                                                aTGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTa                                                                                                                                                           <  1:1258289/239‑1 (MQ=255)

                                                                                aTGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTa                                                                                                                                                           <  1:553712/239‑1 (MQ=255)

                                                                                   aCCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGat                                                                                                                                                                                                       <  1:908782/192‑1 (MQ=255)

                                                                                     cACTGGTAGGGCCGGGCTGATTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCGTGTGGCGTGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCAt                                                                                                                                                      <  2:58303/239‑1 (MQ=255)

                                                                                       cttgtggtttCTGGCTGTTTCCCCACGGGAAAGGCTATTCCATGGCCAGAACCGGGAAAAAAAGCGAAGTCCCTTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTg                                                                                                                                                    <  2:1516335/230‑1 (MQ=255)

                                                                                                  tGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTGTTTTCTCCCCTTTAGCATTTGTCATTTTTGTTTTTCCCTTTCCGATGTATTTTTTTAAAAATTAAAAAAAAAGTAAGAAAAAAAAAAAAAAATGGTATGGTAAAGGGTAAAATTTTAGAAATTTTTACACCCCGTTGTATTTTTTA‑TCATTTGGGCGATaaaa                                                                                                                                         >  2:1222649/1‑239 (MQ=255)

                                                                                                   ggCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAAt                                                                                                                                       <  1:1492249/239‑1 (MQ=255)

                                                                                                   ggCTGCTTCCCCACAGAAAAAGCACGTCAGGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAAt                                                                                                                                       <  2:643190/239‑1 (MQ=255)

                                                                                                    gctgctTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAAt                                                                                                                                       <  1:1730272/238‑1 (MQ=255)

                                                                                                    gctgctTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCCCTTTAGCATTTTACATTATGGTTTTCCCTTTTCAGATGAATTTTTTTAAAATGTAAAAAAAAAGTAGGAAAAAAAAAAAAAAAA‑GTCTGGATATTGGTAACATTTTTCGAATTTTTTTCCCCCTGGCGGTTTTTTTTTCATTGGGGC‑ATaaaaaaa                                                                                                                                      >  1:1220049/1‑237 (MQ=255)

                                                                                                     ctgctACCCCCCCGTAACAACCATACCATCACCAGAACCGGGAAAATAAGCGAAGTTTTCTTGTGGCGGTTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAATT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATaa                                                                                                                                     <  2:1757166/239‑1 (MQ=255)

                                                                                                         tcacccACAGGAACTGCGTTACCAGCGCAAGAACCGGAAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTGACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTAt                                                                                                                                 <  2:1830680/236‑1 (MQ=255)

                                                                                                               gcgggAACAGATGTACCATCGCCAGAACCGGAAAAATACTCTATGTACACTTGTTGCGGGTTTTTACCGCCTCTTGAGCATTTTACATTATGGTTATCCCTTTGCAGATGAATCTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTGTTTACTCATTGTGGC‑ATAAAAATAAGTATTACGtt                                                                                                                           <  2:1097949/236‑1 (MQ=255)

                                                                                                                     aCAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACa                                                                                                                     <  1:29998/239‑1 (MQ=255)

                                                                                                                         cACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCCCCTTAGCCTTTTTCATTTTTGTTTTTCCTTTTCAGATGGATTTTTTCCAAAAGTAAAAAAAAAGTAGGGAAAAAAAAAGAAAAA‑GTCTGGGTATTGGTAAAATATTTTTAATTTTTTTTCCCCCGTCGATTTTTTTTTTATTTGGGC‑ATAAAAAAAAATATTACGTTTTGACAAagt                                                                                                                 >  1:926371/1‑239 (MQ=255)

                                                                                                                          aCTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAAtgt                                                                                                                 <  2:30246/238‑1 (MQ=255)

                                                                                                                             aCCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGGTTTTTCCCCCCCTTTAGGAATTGACATTATTGGTTTCCCTTTTCAGATGAATTTATTTAAAAAGTAAAAAAAAGGTAGGAAAAAAAAAAAAAAAT‑GTCTGGATATTGGTAAAATTTTTTGAAATTTTTCCCCCCCGTCGCATTTTTTTTCTTTTGGGC‑ATAAAAAAAAAAATTACTTTTTGACAAtgtttgt                                                                                                             >  1:538353/1‑239 (MQ=255)

                                                                                                                                   gcCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGc                                                                                                       <  1:1855779/239‑1 (MQ=255)

                                                                                                                                   gcCAGAACCGGGAAAAAAAGGGTAGCCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGc                                                                                                       <  2:1571133/239‑1 (MQ=255)

                                                                                                                                     cAGAACCGGGAAAATAAGGGAGGTCTCCTGGTGGCGTGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                                                                     <  2:607727/239‑1 (MQ=255)

                                                                                                                                     cAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAGAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                                                                     <  1:330753/239‑1 (MQ=255)

                                                                                                                                     cAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                                                                     <  2:286457/239‑1 (MQ=255)

                                                                                                                                     cAGAACCGGGAAAAGAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGt                                                                                                     <  1:1354840/239‑1 (MQ=255)

                                                                                                                                         aCCGGGAAAATAAGCGAAGTCTCCTTTTGGCGGTTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTctct                                                                                                 <  2:535190/239‑1 (MQ=255)

                                                                                                                                          ccGGGAAAATAAGGGAAGTCTCCTTGTGGCGGTTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCtt                                                                                                <  2:1855666/239‑1 (MQ=255)

                                                                                                                                                        gaattgtcCTTGGTGGGGGTTGTTACCGCCTCTTGAGCATTGGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAACTAACCGAAAGG‑GTCTGGATATCGGTAACATTTTAGGAATTTTTTTCGCGCTGTCGATTTTTTACTCATTCGGGC‑ATAAAAATAAGTATTACGTTTAGACCATGTTTGTTTCAGCGTCTCTTAAGCATAGTCTgtc                                                                                  <  2:1863340/233‑3 (MQ=255)

                                                                                                                                                             ctcCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGaa                                                                             <  1:1471918/239‑1 (MQ=255)

                                                                                                                                                             ctcCTTGTGGAGGGTTTTTACCGTCTCTTGAGCATTTGACATTATGGTTATCCCTTTTCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATATCAGTATGT‑GTCTGGATCTCGGTAACAATTTACGAATTTTTCCGCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATCACTTTTACACAATGTTTGTTTTAGCGTCTCTTAAGATGAGTCTGACCTGa                                                                              <  2:70884/238‑1 (MQ=255)

                                                                                                                                                              tcCTTGTTGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAAAGTAAAAAATAGGTAGGAAAAATAACAGGAAGT‑GTAGAGATATCGGTAAGCTTTTTCGCATTTTTACCCCGCTGTCGAGTTTTTACTCATTCGGGC‑ATAAAAATAAGTAGTACGTTTAGACAATGTTTGTTTTAGCGTTTCTTAAGAAGAGGCTGACTTGaaa                                                                            <  2:719539/239‑1 (MQ=255)

                                                                                                                                                                             tttACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTgg                                                             <  2:1717674/239‑1 (MQ=255)

                                                                                                                                                                              ttACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGc                                                            <  2:1093782/239‑1 (MQ=255)

                                                                                                                                                                              ttACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGc                                                            <  1:991638/239‑1 (MQ=255)

                                                                                                                                                                              ttACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGc                                                            <  1:369634/239‑1 (MQ=255)

                                                                                                                                                                              ttACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGc                                                            <  1:1685177/239‑1 (MQ=255)

                                                                                                                                                                                 ccGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAag                                                         <  2:1036829/239‑1 (MQ=255)

                                                                                                                                                                                  cGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAaga                                                        <  1:1887969/239‑1 (MQ=255)

                                                                                                                                                                                   gCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAagag                                                       >  1:1516388/1‑239 (MQ=255)

                                                                                                                                                                                     ctctTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTAt                                                                                                                                 <  1:549631/163‑1 (MQ=255)

                                                                                                                                                                                     ctctTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGt                                                      <  1:996872/238‑1 (MQ=255)

                                                                                                                                                                                            gCATTTGACATTACGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATAtt                                               <  1:1158386/238‑1 (MQ=255)

                                                                                                                                                                                                ttGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATAttgttg                                           >  2:406465/1‑238 (MQ=255)

                                                                                                                                                                                                ttGACATTATGGTTATCCCTTTGCAGATGAATTTACCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGCGTAGATAttgttg                                           >  2:338474/1‑238 (MQ=255)

                                                                                                                                                                                                gtGACATTATGGTTATCCCTTTGCCGATGAATTGATCGAAAATGTAAACAATAGGGAGCAAAACTATCAGATGGT‑GTCTGGATATCGGTAGCATTGTACTAATGATCAGCCCGCTTTCGATGTTTTACTCATTCAGGC‑ATACAAATAAGTATTACGCTTATACAATGTTAGTGGTGGCGTCGCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGCGTAGGTAtttgagc                                          <  2:1527111/238‑6 (MQ=255)

                                                                                                                                                                                                 tGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGTTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGAc                                         <  2:169819/239‑1 (MQ=255)

                                                                                                                                                                                                 tGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGAc                                         <  1:53495/239‑1 (MQ=255)

                                                                                                                                                                                                  gACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTAt                                                                                                                                 <  2:894082/150‑1 (MQ=255)

                                                                                                                                                                                                    cATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACcac                                      <  1:1776173/239‑1 (MQ=255)

                                                                                                                                                                                                       tATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACt                                   <  1:659287/239‑1 (MQ=255)

                                                                                                                                                                                                              aTCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTTAAAATTCTTATGTTTTGGCAaga                                                        <  2:911461/211‑1 (MQ=255)

                                                                                                                                                                                                              aTCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGt                             >  2:1391491/1‑238 (MQ=255)

                                                                                                                                                                                                              aTCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGt                             >  2:1625922/1‑238 (MQ=255)

                                                                                                                                                                                                              aTCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGt                             >  1:1235452/1‑238 (MQ=255)

                                                                                                                                                                                                              aTCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGt                             >  1:767045/1‑238 (MQ=255)

                                                                                                                                                                                                                cccTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAAtgt                                                                                                                 >  1:377203/1‑152 (MQ=255)

                                                                                                                                                                                                                   tttGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACt                       >  1:198345/1‑239 (MQ=255)

                                                                                                                                                                                                                    ttGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACtt                      >  1:303064/1‑239 (MQ=255)

                                                                                                                                                                                                                     tGCAGATGAATTTATCGAAAATGTAAAAAATAGGTTGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACttt                     >  2:308967/1‑239 (MQ=255)

                                                                                                                                                                                                                     tGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACttt                     >  1:1572686/1‑239 (MQ=255)

                                                                                                                                                                                                                     tGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACttt                     >  1:1680412/1‑239 (MQ=255)

                                                                                                                                                                                                                          aTGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAAGTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTaaa                >  1:1030325/1‑239 (MQ=255)

                                                                                                                                                                                                                          aTGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGATTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTATGAACTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAAGGTTCAACTTTGTaaa                >  2:1317658/1‑239 (MQ=255)

                                                                                                                                                                                                                           tGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTaaa                <  1:406465/238‑1 (MQ=255)

                                                                                                                                                                                                                           tGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTaaa                <  2:516347/238‑1 (MQ=255)

                                                                                                                                                                                                                           tGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTaaa                <  2:1235452/238‑1 (MQ=255)

                                                                                                                                                                                                                           tGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTaa                 <  1:514824/237‑1 (MQ=255)

                                                                                                                                                                                                                           tGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTaa                 <  1:1382976/237‑1 (MQ=255)

                                                                                                                                                                                                                           tGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTaa                 <  1:241619/237‑1 (MQ=255)

                                                                                                                                                                                                                             aaTTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACcac                                      <  2:1079332/214‑1 (MQ=255)

                                                                                                                                                                                                                              aTTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGa            <  1:1250257/239‑1 (MQ=255)

                                                                                                                                                                                                                                 tATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAaga                                                        >  1:20669/1‑192 (MQ=255)

                                                                                                                                                                                                                                 tATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAaga                                                        <  2:20669/192‑1 (MQ=255)

                                                                                                                                                                                                                                   tCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTTTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCaa       <  2:1474283/239‑1 (MQ=255)

                                                                                                                                                                                                                                   tCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCaa       <  1:1527344/239‑1 (MQ=255)

                                                                                                                                                                                                                                       aaaTGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGt                                                                                       <  2:771888/155‑1 (MQ=255)

                                                                                                                                                                                                                                       aaaTGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGt                                                                                       >  1:771888/1‑155 (MQ=255)

                                                                                                                                                                                                                                        aaTGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACt                                   <  1:606353/206‑1 (MQ=255)

                                                                                                                                                                                                                                        aaTGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATg  <  2:1781127/239‑1 (MQ=255)

                                                                                                                                                                                                                                        aaTGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATg  <  1:1270803/239‑1 (MQ=255)

                                                                                                                                                                                                                                        aaTGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATg  <  1:8321/239‑1 (MQ=255)

                                                                                                                                                                                                                                        aaTGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATg  <  2:820882/239‑1 (MQ=255)

GATGGGCTAATACGTCCGCATGACGGACAACACTAAAGGCGCTACTTAAAATACCAATAAGCGCAAGAAGATTGATGGCAATGACCACTGGTAGTGTCTGGCTGCTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTATGGTTATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATAGGTAGGAAAAATAACAGAAAGT‑GTCTGGATATCGGTAACATTTTACGAATTTTTACCCCGCTGTCGATTTTTTACTCATTGGGGC‑ATAAAAATAAGTATTACGTTTAGACAATGTTTGTTTTAGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATG  >  NC_007779/1273228‑1273698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`