BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,386,502	T→G	8.6%	G224G (GGT→GGG)	Y75_RS06965 →	YcjX family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,386,502	0	T	G	8.6%	471.1 / 3.1	171	G224G (GGT→GGG)	Y75_RS06965	YcjX family protein
Reads supporting (aligned to +/- strand): ref base T (52/92); new base G (19/2); total (76/95)
Fisher's exact test for biased strand distribution p-value = 2.09e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 171 total aligned reads displayed.

CGCAGGACTATTTAAGCTGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTGGGCCACAGGCATTTAATGATATGCG  >  NC_007779/1386267‑1386738

cgcAGGACTCTTTAAGCTGGTCGCGCCAGATGACGGGCTTGCTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGCATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGGGCTTTCCCCCGCGGGGACCGGCTATACCCCCCCCCTTAAAGGACCGGGGCCGCCATTTATTCCCTCTGGCGGCTTTTTCTTTGCCGGAGCTATGGCA‑GGAgcg                                                                                                                                                                                                                                              >  2:1010975/1‑239 (MQ=255)

               gCTGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAAt                                                                                                                                                                                                                                 >  1:1729510/1‑237 (MQ=255)

               gCTGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGGGGACCGGTTATCCCCACCACTGTAAAGAGCAGGGGCTGCACCTTATTTAGCCTGGGCCCTTTTGCTTGCCGGGGGATTTGGCA‑GGGGGGGCcgccgggccgact                                                                                                                                                                                                                               >  2:1844988/1‑229 (MQ=255)

                  ggTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGGGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCAGGGTGGGCCCccgcgcgatttt                                                                                                                                                                                                                               >  2:195400/1‑229 (MQ=255)

                   gTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGGCGCCGCGCGGACCGGTTATCTCCACCACTGGAAAGAGCAGGGGTGGGCCTTTATTCAGGCTGGGCGCGTTGTCTTGCAGGGGGGAATGGCA‑GGTGTGGCCgcgcctgaattcctt                                                                                                                                                                                                                            >  2:915555/1‑227 (MQ=255)

                   gTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGCGGCCCCGCCGCAAttcttt                                                                                                                                                                                                                            >  1:1126603/1‑237 (MQ=255)

                    tCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGCGCCCGCGCTGCAATTCTTcc                                                                                                                                                                                                                           >  1:9298/1‑238 (MQ=255)

                              tGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCgg                                                                                                                                                                                                                  <  1:1324307/237‑1 (MQ=255)

                              tGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCg                                                                                                                                                                                                                   <  1:1204000/236‑1 (MQ=255)

                                            aaTGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTgggg                                                                                                                                                                                                  <  1:1381088/239‑1 (MQ=255)

                                            aaTGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTgggg                                                                                                                                                                                                  <  1:846028/239‑1 (MQ=255)

                                            aaTGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTgggg                                                                                                                                                                                                  <  1:260828/239‑1 (MQ=255)

                                                   aGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCcg                                                                                                                                                                                                                                          <  2:1128026/192‑1 (MQ=255)

                                                   aGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGGGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGGGGGT‑c                                                                                                                                                                                           >  1:573702/1‑238 (MQ=255)

                                                                gacGGGGAAAAGGCGAAGGAGGGGGGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCACCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCa                                                                                                                                                                               <  2:76515/235‑1 (MQ=255)

                                                                  cGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGcc                                                                                                                                                                           <  1:1837900/239‑1 (MQ=255)

                                                                      gAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGAt                                                                                                                                                                        <  1:1407886/238‑1 (MQ=255)

                                                                      gAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGGGGCCGGGTGTCGAGACCTGGGGCGAGT‑CCAAACTGGGGCAGGCCGATa                                                                                                                                                                       >  1:1758301/1‑239 (MQ=255)

                                                                                atgatgAGCGAAGGGCTGGGCCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑Caa                                                                                                                                                            <  1:178019/239‑1 (MQ=255)

                                                                                          aaGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGGGT‑CCAAAATGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑tg                                                                                                                                                 >  1:965084/1‑239 (MQ=255)

                                                                                                    cccGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAgc                                                                                                                                       <  1:1004024/239‑1 (MQ=255)

                                                                                                    cccGCTAGCGCCGGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAg                                                                                                                                        <  2:799435/238‑1 (MQ=255)

                                                                                                     ccGCGAGCGCATGCCTACGAAAGCCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGGGCAGGGGCTGCACTTGATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAgcg                                                                                                                                      <  2:697141/239‑1 (MQ=255)

                                                                                                       gCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCGCCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATGCCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCt                                                                                                                                    <  1:1869139/239‑1 (MQ=255)

                                                                                                       gCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAc                                                                                                                                                                <  1:544993/213‑1 (MQ=255)

                                                                                                       gCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCt                                                                                                                                    <  1:702093/239‑1 (MQ=255)

                                                                                                       gCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGGGGCCCCCCGGCACATCTTTCCCTTGGCGGGTGGGGGTAACCGGGGCGGGG‑GCCAACAGGGGGCGGCCGGTAAGCATAC‑CAAAGTCGGAAGtgctgccggggggc                                                                                                                                     >  2:109372/1‑231 (MQ=255)

                                                                                                       gCTAGCACCTGCCGACGAAAACCGGCTGGCGGGCATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCt                                                                                                                                    <  2:1054583/239‑1 (MQ=255)

                                                                                                         tAGCGCCTGCCGACGAAAACCGGCGGGCGGCAATTGCCGCCGCGTGTACCGATTATCTCCTCCACTGTAAAGAGCAGGGGCTGCACTGTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCttt                                                                                                                                  <  2:1313320/239‑1 (MQ=255)

                                                                                                               cTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGCGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAattat                                                                                                                            <  1:1409478/239‑1 (MQ=255)

                                                                                                                 gCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGGCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGCTACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAAttatta                                                                                                                          <  2:139929/239‑1 (MQ=255)

                                                                                                                  ccGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCGCCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGTCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAAttatta                                                                                                                          <  2:746918/238‑1 (MQ=255)

                                                                                                                     acgaAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGCGCCCCCGCTGCCATTCTTCCCCGGGCCGGGTGTCGATACCTGGGGCGAGG‑TCCAACTGGCGCACGCCGACAAAGATAC‑CAAAGCCGGGC‑TGCGGGGCGCGCGCTTTTAATATTACttg                                                                                                                      >  2:1435051/1‑237 (MQ=255)

                                                                                                                         caaCCGGAGGGCGGACCTTGCCTCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCGGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCGCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCgaga                                                                                                                  <  2:1105893/238‑1 (MQ=255)

                                                                                                                              ggCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAggtg                                                                                                             <  1:1162490/239‑1 (MQ=255)

                                                                                                                                    cGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATGCCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTGCTGCGAGAAGGTGGTGaa                                                                                                        <  1:197927/238‑1 (MQ=255)

                                                                                                                                    cGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGaa                                                                                                        <  1:632964/238‑1 (MQ=255)

                                                                                                                                     ggACATTGCCTCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAg                                                                                                       <  2:1082966/238‑1 (MQ=255)

                                                                                                                                     ggACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAgg                                                                                                      <  1:1010975/239‑1 (MQ=255)

                                                                                                                                     ggACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAg                                                                                                       <  1:1796712/238‑1 (MQ=255)

                                                                                                                                                   cgTGGACCGATTATCTCAACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGAGAGCCCCCGCTTCAATTCTTCCCGTGGCCGGATTGCGGGACCTTGGGCGATT‑ACCAACTGGCGCAGGCCGACAAG‑ACACACAAAGTCGGAA‑TGCTGCGCGCTCACTTTATATATTACTGCGGAAAGGTGTTTACGGGGtttcttaaaaa                                                                                         >  2:1452985/1‑229 (MQ=255)

                                                                                                                                                    gTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATc                                                                                       <  1:109372/239‑1 (MQ=255)

                                                                                                                                                            aTTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAgggg                                                                                                    <  1:950778/218‑1 (MQ=255)

                                                                                                                                                                  tcCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCttt                                                                         >  1:725393/1‑239 (MQ=255)

                                                                                                                                                                    caccccTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGa                                                                       <  2:1538117/239‑1 (MQ=255)

                                                                                                                                                                    caccacTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAattat                                                                                                                            <  2:1237483/186‑1 (MQ=255)

                                                                                                                                                                    caccacTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGa                                                                       <  1:253510/239‑1 (MQ=255)

                                                                                                                                                                    caccacTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAACATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAattat                                                                                                                            >  1:1237483/1‑186 (MQ=255)

                                                                                                                                                                       cacTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGAcc                                                                     >  1:1641229/1‑238 (MQ=255)

                                                                                                                                                                          tGTAAAGAGCAGGGGCTGCCCTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGCGCGCCCCCGCGGCAAACTTTTGCGTTGCCGGATAGAGCAACCTGGGCGGCGC‑CCAAACCGGGGCGAGCCACTAAGCAAAC‑CACTGCCGGGA‑CGCCGCGCCGGAGCTCTATCTCTTACGGTGAGAAGGGCGGGAGAGGGTTGCCTAAGAATCTTTTTCTCAGCTTGCACCggcc                                                                 >  2:167166/1‑236 (MQ=255)

                                                                                                                                                                          tGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGc                                                                                                                                                                                                 <  1:1081128/114‑1 (MQ=255)

                                                                                                                                                                          tGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGGGCCCGCGCTGCAATTTTTCCCGGGGCCGGATGTCGAAACCCGGGGGGGGG‑CCAAACCGGGCCAGGCCGATAAGCATAC‑CAAAGCCGGAA‑AGCCGCCGGGGCGCTTTAATTATTACTGGGCGAGGGGGGGGAAGGGGTTCTATAAGAATACTTTTCTCCGCTTTGTCccccc                                                                 >  2:942394/1‑238 (MQ=255)

                                                                                                                                                                            tAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAatta                                                                                                                             <  1:369039/177‑1 (MQ=255)

                                                                                                                                                                            tAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAatta                                                                                                                             >  2:369039/1‑177 (MQ=255)

                                                                                                                                                                            tAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGa                                                               >  1:1134335/1‑239 (MQ=255)

                                                                                                                                                                             aaaGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGa                                                               <  1:65488/238‑1 (MQ=255)

                                                                                                                                                                             aaaGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGa                                                               <  1:902782/238‑1 (MQ=255)

                                                                                                                                                                             aaaGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGa                                                               <  1:508213/238‑1 (MQ=255)

                                                                                                                                                                                 agCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGAAACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTTTGCGCTTTGACCGCCAGATtgtg                                                          >  1:377823/1‑239 (MQ=255)

                                                                                                                                                                                  gcgggggCTGCACGTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATtgtg                                                          <  2:409889/235‑1 (MQ=255)

                                                                                                                                                                                   cAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGAGCGCCCCCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGGGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATtgt                                                           >  1:1599369/1‑236 (MQ=255)

                                                                                                                                                                                    aGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAg                                                                                                       >  1:1807713/1‑191 (MQ=255)

                                                                                                                                                                                    aGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAg                                                                                                       <  2:1807713/191‑1 (MQ=255)

                                                                                                                                                                                    aGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCtg                                                       >  1:75116/1‑239 (MQ=255)

                                                                                                                                                                                    aGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGGGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCtg                                                       >  1:1630608/1‑239 (MQ=255)

                                                                                                                                                                                    aGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAAATCTTCCCGCGGGCGGATGTCGAAACCTGGGGCGAGG‑CCAAACTTGCGCAGGCCGATAAGCATAA‑CCATGCCCGAA‑TGCCGCCCGAGCGCTTTTATTATTACTTGGACGAGGTGGGGAAGGGGTTCTTTTAGAATCAATTTCTTCGCTTtgcctgcccgcatgtggtg                                                       >  2:1464326/1‑228 (MQ=255)

                                                                                                                                                                                    aGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGCGCCCGCGCCGCAAATCTTCCCGTGGCCGGGTGTCGATACCTGGGGCGAGTCCCAAACT‑GCGCCGGCCCATAAACACAC‑CAAAGCCGGAA‑TGCGGCGCGAGCGCTTTCAATATTAATGCGAGAAGGGGGGGAGGGGGTGCCATAAAAATCATTTTTCGAGATTTTACCGCCCGCTTGTGCtg                                                       >  2:58598/1‑239 (MQ=255)

                                                                                                                                                                                      gggCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGcgcg                                                                                                                                          >  1:473665/1‑154 (MQ=255)

                                                                                                                                                                                      gggCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGcgcg                                                                                                                                          <  2:473665/154‑1 (MQ=255)

                                                                                                                                                                                      gggCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCtggt                                                     >  1:1585614/1‑239 (MQ=255)

                                                                                                                                                                                                 tATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGc                                          <  1:209592/239‑1 (MQ=255)

                                                                                                                                                                                                 tATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGc                                          <  1:332257/239‑1 (MQ=255)

                                                                                                                                                                                                 tATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGc                                          <  1:691500/239‑1 (MQ=255)

                                                                                                                                                                                                 tATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAAATGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGGGGTGAAGGGGGTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGGGGATTTCCTGc                                          >  1:1816748/1‑239 (MQ=255)

                                                                                                                                                                                                 tATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATACGGCA‑GGTGCGCCCGCGCTGCAATTTTTCCCGTGGCCGGATGTCGATAACTGGGGGGGGG‑CCAAACCGGCGCCGGCCGATAAGCATAC‑CAATGCCGGGC‑TGCTGCGCGCGCGCCTTAATTATTACCGCGAGAAGGGGGGGGAGGGGGTCTATAAGAATCATTTTTTGTGCTTTGACCGCCAGATTGGGGTGGTGGAATGCCTGc                                          >  2:332257/1‑239 (MQ=255)

                                                                                                                                                                                                   ttCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCaa                                        <  1:1474585/239‑1 (MQ=255)

                                                                                                                                                                                                   ttCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCaa                                        <  2:1134335/239‑1 (MQ=255)

                                                                                                                                                                                                   ttCAGCCTGGGCGATTTAACTGGCGGGGTGATATGGCC‑GGTGGGCACGTGCTGCAATTTTTCCCGTGGCCGGATGAAAATAAATTGGTCATGT‑GCAAACTGGCGCAGGCCAATAAGCATAC‑AATTGCTGTAA‑TGGTGCGCGAGCGATTTAATTATTGCTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATAATTTACTACGCTTTGGCCGCCAGATTGTTATGGTGGATTGCATGCaa                                        <  2:515553/239‑1 (MQ=255)

                                                                                                                                                                                                      aGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCACTTCTTCCCGTGGCCGGATGGCGATACCTGGGGCGAGT‑CCAAACTGGCGCCGGCCGATAAGCATAC‑CAATGCCGGGA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGGGGGGAAGGGGTTCTATAAGCATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAAcc                                      >  1:940977/1‑238 (MQ=255)

                                                                                                                                                                                                      aGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTTGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGCA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGGTCTATAAGAATCATTTTCTGCGCTTTGATCGCCAGATTGTGCTGGTGGATTGCCTGCAAcc                                      >  1:1855343/1‑238 (MQ=255)

                                                                                                                                                                                                      aGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCg                                                                                                                                                                          <  2:841932/108‑1 (MQ=255)

                                                                                                                                                                                                      aGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAAcc                                      >  1:1331178/1‑238 (MQ=255)

                                                                                                                                                                                                      aGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAAcc                                      >  1:449259/1‑238 (MQ=255)

                                                                                                                                                                                                       gCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCCCGCTGCCATTCTTTCCGTGGCCGGATGTCGATACCTGGGGGGGGT‑CCAAACTGGCGCAGGGCGATAAGCATAC‑CCATGCCGGGA‑TGCTGCGCGGGCGCCTTAATTATTAATGGGAGGAGGTGGTGGAGGGGGTCTATTAGAATTATTTTCTTCTCCTTGACCGCCAGAGTTGGCTGGTGGGTTGTCTGCACCct                                     >  2:305115/1‑238 (MQ=255)

                                                                                                                                                                                                       gCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGCGCCCCCCCTGCAATTGTTTCCCTCGGCGGATGTCGATACCTTGGGCGGGT‑CCCAACCGGCGCAGGCCCATAAGCATAC‑CCAGGTCGGCA‑TGCTGCGCGGGCGCTTTAATTATTACTTCCACAAGGGGGGGGAGGGGTTCTTTACAAATCATTTTCTGCGCTTCGACCGCCGGCTTTTGCCGGCGGATTGCCTTCAAccc                                     >  2:1921285/1‑237 (MQ=255)

                                                                                                                                                                                                        ccTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGGTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGGGGATTGCCTGCAACctc                                    >  1:156651/1‑238 (MQ=255)

                                                                                                                                                                                                        ccTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGGGCGCCCCCGCTGCCATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGGTAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGGGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCCGATTGTGCGGGGGGATTGGCTGCCAccct                                    >  2:278126/1‑236 (MQ=255)

                                                                                                                                                                                                         cTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGGGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACct                                     <  2:64298/236‑1 (MQ=255)

                                                                                                                                                                                                         cTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACct                                     <  2:1729510/236‑1 (MQ=255)

                                                                                                                                                                                                            ggCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGGGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAAc                               >  1:305072/1‑239 (MQ=255)

                                                                                                                                                                                                               gcTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGTCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGt                            <  1:1709330/239‑1 (MQ=255)

                                                                                                                                                                                                               gcTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAg                             <  1:1084757/238‑1 (MQ=255)

                                                                                                                                                                                                               gcTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGt                            <  2:1384732/239‑1 (MQ=255)

                                                                                                                                                                                                                  ttGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGGGCGCTTTAATTATTACTGCGAGAAGGGGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTgg                          >  1:1804915/1‑238 (MQ=255)

                                                                                                                                                                                                                  ttGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTgg                          >  1:347280/1‑238 (MQ=255)

                                                                                                                                                                                                                  ttGTCTTGCCGGGAGATATGGCA‑GGGGCGCCCGCGCCGCAATTCTTCCCGTGGCCGGGTGTCGATACCTGGGGCGAGG‑CCCAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCGGCGCGAGCGCCTTAATTATTACTGCGGGAAGGGGGTGAAGGGGGTCTATAAGAATCATTTTCTGCGTCTTTACCGCCAGAGTGTGCTGGTGGATTGCCTGCTACCTCTCCACAGTggg                         >  2:457627/1‑239 (MQ=255)

                                                                                                                                                                                                                          ccGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATaa                                                                                            >  1:1446060/1‑164 (MQ=255)

                                                                                                                                                                                                                                gagagggCA‑GGTGCGCCCGCGCTCCAATTCTTCCCGTGGCCGGATGTCGGTACCTGGGGCGGGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTGGCCCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTAAACAGTGGGCGACAGGCATTTa            <  2:725393/233‑1 (MQ=255)

                                                                                                                                                                                                                                       cA‑GGTGCGTCCGCCCTGCAATTATTCCCGTCGCCGGATGTCGTTACCTGGGGCGAGT‑CCAAACTGGCGCATGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTGGGCCACAGGCATTTAATGatat     <  2:892469/238‑1 (MQ=255)

                                                                                                                                                                                                                                           gTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTACTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTGGGCCACAGGCATTTAATGATATGCg  >  1:1922762/1‑238 (MQ=255)

CGCAGGACTATTTAAGCTGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCA‑GGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGT‑CCAAACTGGCGCAGGCCGATAAGCATAC‑CAATGCCGGAA‑TGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTGGGCCACAGGCATTTAATGATATGCG  >  NC_007779/1386267‑1386738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`