BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,531,018	A→C	13.9%	H389P (CAC→CCC)	Y75_RS07695 →	RHS repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,531,018	0	A	C	13.9%	406.5 / 14.1	167	H389P (CAC→CCC)	Y75_RS07695	RHS repeat protein
Reads supporting (aligned to +/- strand): ref base A (85/54); new base C (2/26); total (87/80)
Fisher's exact test for biased strand distribution p-value = 9.60e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 167 total aligned reads displayed.

GGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTATCTGGTG  >  NC_007779/1530782‑1531254

ggCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCAcc                                                                                                                                                                                                                                             >  1:834959/1‑239 (MQ=255)

ggCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCCGGCGCTCATCAGCGAAAACGGCAATACGGCGCGGCGCGGGGGGTATGAGGGAAGGGGCAAACAGGCTAATGGGGGGAACCCGCCACACCCGGAcc                                                                                                                                                                                                                                             >  2:1013358/1‑239 (MQ=14)

       cgcgTGAGCAGTGAACGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCACCTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGGAAAGTTCCTTTTTACCACT‑GCGACCACCGGGGCCCGCCGCCGGAGCTCCACAACCAAGCCGGCACTACGGCGGGGCGCGGGGTGTAAGATGGATGGGGCGAACAGCCTAATGGGGAGAAACCGCACAACCTGCCCccgccgc                                                                                                                                                                                                                                       >  2:156812/1‑237 (MQ=14)

               cAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGGGGAGCAACTGGCCAGACAGGGGGAGCCGGAATACACACCGGCGCGAAAAGTTCCTTTTTACCACT‑GCGACCACCGGGGCCTGCCGCCGGCGCTCATCAGCGAAGACGGCAACACCGCGTGGCGCCGGGAAGATGATTAATGGGGGAAACAGCTGAATGATGAGAACCCGCATCACCCGCACCAGCCGCACCggccg                                                                                                                                                                                                                               >  2:1421851/1‑234 (MQ=14)

                aGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGGGGAGCAACTGGCCAGACAGGTGGAGCCGAAATACACGCCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGc                                                                                                                                                                                                                              <  1:345835/238‑1 (MQ=255)

                         cGGGCGTGGCTTGCGCAGTGGGGGCTGACGGTGGAGCAACGGGCCAGACGGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCCCCTGCACCAGCCGTACCGTCTGCCAGGgcagca                                                                                                                                                                                                                    <  1:1606811/239‑1 (MQ=255)

                            gCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGgcagcagca                                                                                                                                                                                                                 >  1:1893285/1‑239 (MQ=255)

                            gCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGgcagcagca                                                                                                                                                                                                                 >  1:1408094/1‑239 (MQ=255)

                                    tGCGCAGTGGGGGCTGACGGGGGAGCAACTGGCCAGACAGGTGGCGCCGGAATACACACCGCGGCGAAAAGTTCATTTTTTCCCTC‑GCAGCCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATgag                                                                                                                                                                                                          <  1:259174/238‑1 (MQ=14)

                                           tGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGAGGCGCGGGGAGGATCATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCCGCCAGGGCAGCAGCAAGATCAGGAGTAggg                                                                                                                                                                                                  >  2:1674595/1‑239 (MQ=255)

                                            gCGGCCTGACGGTGGAGCAACTGCCAAGACGGGTGGAGCCGGAAACCCCACCGGCGCGAAAAGTTCATTTTTACCACC‑GCGACCCCCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCgggg                                                                                                                                                                                                 <  1:1710610/239‑1 (MQ=17)

                                            cggggcgggcGGTGGAGAACCTGCCCAGACGGGGGGCCCCGGAAAACACCCCGGCGCAAAAAGTTCATTTTTCCCGCC‑GCGCCCCCGGGGGCCGGCCGCTGGCGCGCATCAGCGAAGACGGCAATACGGCGGGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAAGGAGGAGACCCCGCATCACCGGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCgggg                                                                                                                                                                                                 <  2:1344136/237‑1 (MQ=17)

                                             cGGGCTGACGGTGGAGCAACTGGCCAGAAAGGGGGGGCGGGAATACCCCCCGGCGCGAAAAGTTCATTTTTCCCCCT‑GCGCCCCCGGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCACCCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCgggg                                                                                                                                                                                                 <  1:1244696/238‑1 (MQ=17)

                                                     ggggggAGCAACGGGCCAGAAGGGTGGAGCCGGAATCCCCACCGGGGGGAAAATTTCATTTTTCCCCCT‑GCGACCACGGGGCCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAAGGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACta                                                                                                                                                                                         <  1:1483/234‑1 (MQ=17)

                                                     cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACtat                                                                                                                                                                                        >  2:431727/1‑239 (MQ=255)

                                                     cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACtat                                                                                                                                                                                        >  1:645011/1‑239 (MQ=255)

                                                     cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACtat                                                                                                                                                                                        >  1:1252953/1‑239 (MQ=255)

                                                     cGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAACACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCCGCCAGGGCAGCAGCCTGATGAGGCGTCGGGGCCGTACtat                                                                                                                                                                                        >  2:332708/1‑239 (MQ=255)

                                                          gAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACtata                                                                                                                                                                                       >  1:1344136/1‑235 (MQ=255)

                                                          gAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCCGATCACCTGCACCAGCCGTACCGTCCGCCAGGGCAGCAGCCTGATGAGGGGTCGGGGCTGTACGATAAcc                                                                                                                                                                                    >  2:883803/1‑238 (MQ=255)

                                                                  ggCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCCGCATGATGAGGGGGCGGGGCTGTCGTATAACCGGCAcccg                                                                                                                                                                            >  2:379462/1‑236 (MQ=255)

                                                                        aCAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGc                                                                                                                                                                                                >  2:815498/1‑212 (MQ=255)

                                                                        aCAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACg                                                                                                                                                                     >  2:792358/1‑239 (MQ=255)

                                                                        aCAGGTGGAGCCGGAATACACACCGGCGCAAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGc                                                                                                                                                                                                <  1:815498/212‑1 (MQ=255)

                                                                          aGGGGGGGCCGGAATACCCCCCGGCGCGAAAGTTTCTTTTTCCCCCCG‑GCGCCCACGGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCCCCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGAt                                                                                                                                                                   <  1:1311670/239‑1 (MQ=17)

                                                                             tGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCg                                                                                                                                                                >  2:701227/1‑239 (MQ=255)

                                                                                   gggAATCCACCCCGGCGCGAAAAGTTCATTTTTCCCACT‑GCGCCCCCGGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCa                                                                                                                                                           <  1:889360/237‑1 (MQ=255)

                                                                                   cGGAATCCACACCGGCGCGAAAAGTTCATTTTTCCCCCT‑GCGCCCCCGGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAg                                                                                                                                                          <  1:332708/239‑1 (MQ=255)

                                                                                    ggAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgg                                                                                                                                                         <  1:492752/239‑1 (MQ=255)

                                                                                    gaaaTCCACGCCGGCGCGAAAAATTCTTTTTCCCCACT‑GCGACCCCCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGAAGTAGGAGGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgg                                                                                                                                                         <  1:578456/237‑1 (MQ=17)

                                                                                      aaTCCACCCCGGCGCGAAAAGTTCATTTTCCCCCCT‑GCGACCCCCGGGGCCTGCCGGTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgggg                                                                                                                                                       <  1:154859/239‑1 (MQ=255)

                                                                                       ctcccccccGGCGCGACAACGTCTTTTTTACCCGTGGCGCCCGGGGGGGCGTGCGGCGGGGGCTCACCGGGGCGGGCGGCAAACGGGGGGGGGGGGGGGAGTATGGTGAAGGGGGCAACCAGCTAAAGGGGGAGACCCCCCCCCACCGGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgggg                                                                                                                                                       <  2:1216795/232‑1 (MQ=9)

                                                                                            cacCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTAAGATCCGTTGCAGGGGCGGtat                                                                                                                                                 >  2:638201/1‑239 (MQ=255)

                                                                                              ccGGCGGAAAAAGTTCATTTTTACCACG‑GGGACCACGGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAAGGGGGCAACCAGCTTAATGGGGAGAACCCGCATCACCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTatat                                                                                                                                               <  1:713412/239‑1 (MQ=17)

                                                                                               cGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATc                                                                                                                                              >  2:1277814/1‑239 (MQ=255)

                                                                                                  cgcgAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCCACGGCACTACGAACCGTTGCCGGGGCGGGatattcc                                                                                                                                            >  2:316350/1‑235 (MQ=255)

                                                                                                  cgcgAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGGGGGATATccc                                                                                                                                            >  2:257355/1‑236 (MQ=255)

                                                                                                              ttttttCCCCCG‑GCGCCCCCGGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGAtt                                                                                                                               <  1:250317/238‑1 (MQ=255)

                                                                                                                       ccT‑GCGCCCCCCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCCCCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTgaga                                                                                                                      <  1:708061/238‑1 (MQ=255)

                                                                                                                         t‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAgg                                                                                                                    >  1:13696/1‑239 (MQ=255)

                                                                                                                           gCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGtata                                                                                                                                                >  1:1163179/1‑210 (MQ=255)

                                                                                                                              acccccGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga                                                                                                                <  1:1013358/239‑1 (MQ=255)

                                                                                                                               ccccgggggCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga                                                                                                                <  1:272377/233‑1 (MQ=255)

                                                                                                                               ccccgggggCCTGCCGCTGGCGCTCATCAGCGAAGACGGAAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGACCCCGCATCCCCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga                                                                                                                <  1:1951554/233‑1 (MQ=255)

                                                                                                                               cccccGGGCCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATGCGGCGTGGCGCGGGGAGTATGAGGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCACCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtgga                                                                                                                <  1:396250/235‑1 (MQ=255)

                                                                                                                                  cggggcCCGGCGGCTGCCGCCCAGCAGGGAAGACGGAAAGACGGGGGGGCGGGGGAAGTATGATGAAGGGGCCAACCAGTTTAGTGGGGAGACCCCGCATCCCCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtggatgga                                                                                                            <  2:1000308/237‑1 (MQ=17)

                                                                                                                                   ggtgcgcgcgcgcgGGCGCTCGCGAGCGCAGACGGCAATACGGGGTGGCGGGGGGGGTATGATGAAGGGGGCACCCATCTTAAAGAGGAGACCCCGCATCACCTCCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtggatgga                                                                                                            <  2:677467/228‑1 (MQ=17)

                                                                                                                                         cggcggCTGGCGCTCATCAGCGAAGACGGAAATACGGCGTGGCGGGGGGAGTATGATGAATGGGGCACCCACCTTAATGAGGAGAACCCCCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGt                                                                                                      <  1:476402/233‑1 (MQ=255)

                                                                                                                                           gCCGCTGGCGCTAAGCGGAGAAGACGGCAATACGGCGTGGAGCGCGGAGTATGATGAATGGGGCACCCAGCTTAATGAGAAAAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAGCCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCGCCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATc                                                                                                   <  2:514326/239‑1 (MQ=11)

                                                                                                                                            ccGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATc                                                                                                   >  1:1701500/1‑238 (MQ=255)

                                                                                                                                            ccGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCa                                                                                                  >  1:422277/1‑239 (MQ=255)

                                                                                                                                                tGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTAt                                                                                              <  1:792358/239‑1 (MQ=255)

                                                                                                                                                              gAAGAGGGCAATACGGGGGGGCGGGGGGAGTAGGATGAAGGGGGAAACCAGCTTAATGAGGAGAACCCGCATCCCCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGCATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCa                                                                                 <  1:1656977/238‑1 (MQ=18)

                                                                                                                                                                aGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATAc                                                                              <  1:1424920/239‑1 (MQ=255)

                                                                                                                                                                aGACGGAAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATAc                                                                              <  1:206383/239‑1 (MQ=255)

                                                                                                                                                                 gACGCCAAGAGGGCGGGGAGCGGGGATGATGAAAGATGGGCAAACTATCTTAATGGCGAAACCCCGAACCACCTAACCCAGCCGTACCGTCTGCCAGGGCTGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATAc                                                                              <  2:889997/238‑1 (MQ=18)

                                                                                                                                                                  aCGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACaa                                                                            >  1:1636599/1‑239 (MQ=255)

                                                                                                                                                                      cAATGCGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATAc                                                                              <  1:1514471/233‑1 (MQ=255)

                                                                                                                                                                      cAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCCCCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATAc                                                                              <  1:727229/233‑1 (MQ=255)

                                                                                                                                                                         tACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑Ag                                                                    >  1:1412728/1‑239 (MQ=255)

                                                                                                                                                                            ggCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTAAATGACCCCGGAACCGAATGGGGTGAGAGGGGGAGGGGATATGTATATGTATCCGTTTAATCCCATACAAGTGAT‑AGAc                                                                  >  2:1659202/1‑238 (MQ=18)

                                                                                                                                                                              cGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTCTATTACCCCGGACCCGGATGGGGTGAGGGGGGGATGGAAGATGTAGTATGATCCGTTGAAACCCCAACAATGGGT‑AGAcccc                                                               >  2:1496867/1‑238 (MQ=17)

                                                                                                                                                                              cGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGCGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCa                                                               >  1:132043/1‑239 (MQ=255)

                                                                                                                                                                                tGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAAt                                                             >  1:1347044/1‑239 (MQ=255)

                                                                                                                                                                                 ggCGGGGGGAGTAGGAGGAAGGGGGCAACCAGCTAAAGGGGGAAACCCCGCATCCCCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAAt                                                             <  2:1636599/238‑1 (MQ=21)

                                                                                                                                                                                        ggAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAg                                                     >  1:329384/1‑239 (MQ=255)

                                                                                                                                                                                             atgatgAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATg                                                  <  1:1084000/237‑1 (MQ=255)

                                                                                                                                                                                                 tgaATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGAtt                                             <  1:883803/238‑1 (MQ=255)

                                                                                                                                                                                                   aaTGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGGGAGGTGGATGGAATATGTATCAGTCTCCGTTGAATACCATTCAAGGGAT‑AGACCCAATGGGGTTAGATGGGATTgag                                          >  2:1089258/1‑239 (MQ=255)

                                                                                                                                                                                                    aTGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCCCCCCGGACCCGATTGGGTTGAGAGGGGGAAGGAATATGTATCAGTATCCGTTGAATCCCATACAAGGGAT‑AAACCCAAATGGGTTAGATGCGATTgaga                                         >  2:1247412/1‑239 (MQ=255)

                                                                                                                                                                                                    aTGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGGGCGGTGGATGGAATAAGGAACAGGATCCGTTGAATCCCATACAAGGGAT‑AGAACCAATGGGGTTAGATGGGATTgaga                                         >  2:722017/1‑239 (MQ=21)

                                                                                                                                                                                                    aTGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGtggatg                                                                                                              <  1:75814/171‑1 (MQ=255)

                                                                                                                                                                                                    aTGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTgaga                                         >  1:1314321/1‑239 (MQ=255)

                                                                                                                                                                                                    aTGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTgaga                                         >  1:1277366/1‑239 (MQ=255)

                                                                                                                                                                                                    aTGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGGGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTgaga                                         >  1:623321/1‑239 (MQ=255)

                                                                                                                                                                                                        ggCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGCTGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGACCCGTTGCAGGGGCGGGATATCACCCCGGACCCGCTTGGGTTGAGAGGTGGATGGAATATGTATACGTATCCGTTGAATCCCATACAAGTGATAAGCCCCAAT‑GGGTTAGAAGGGAGTGGGAatat                                     >  2:1200617/1‑239 (MQ=18)

                                                                                                                                                                                                        ggCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAgggg                                                                                                                                                       <  1:587912/126‑1 (MQ=255)

                                                                                                                                                                                                         gCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATg                                    >  1:1501288/1‑239 (MQ=255)

                                                                                                                                                                                                          cAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATg                                    >  1:1015488/1‑238 (MQ=255)

                                                                                                                                                                                                           acccAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGAc                                  <  1:782565/237‑1 (MQ=255)

                                                                                                                                                                                                           aaCCACTTTAAAGAAGAAAACCTCCACCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCCCCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGAc                                  <  1:76240/239‑1 (MQ=25)

                                                                                                                                                                                                             ccAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAGTATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACa                                 >  2:1809131/1‑238 (MQ=255)

                                                                                                                                                                                                             ccAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAAt                                                             >  1:914032/1‑210 (MQ=255)

                                                                                                                                                                                                             ccAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGAACCGATTGGGTTGAGAGGTGGATGGAATATGGATCAGTATCCGTTGAATCCCATACAAGGGAT‑AGACCCAATGGGGTTAGGTGCGATTGAGAATATGACAt                                >  2:771592/1‑239 (MQ=255)

                                                                                                                                                                                                             ccAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTAAATCACCCCGGACCCGATTGGGGTAAGAGGTGGAGGGAATAAGTATCAGAAAGCGTTGAATCCCATACAAGTGAG‑CGACGCAATGGGGTTAGAAGCGATTGAGAACATGAAAt                                >  2:482708/1‑239 (MQ=21)

                                                                                                                                                                                                                     aggaggagCCCCCGCATCCCCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGa                        <  2:116506/237‑1 (MQ=255)

                                                                                                                                                                                                                     aTGAGGAGAACCCGCATCCCCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGa                        <  1:431727/239‑1 (MQ=255)

                                                                                                                                                                                                                     aTGAGGAGAACCCGCATCCCCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGa                        <  1:1202406/239‑1 (MQ=255)

                                                                                                                                                                                                                           ataaCCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGATGTGTCGGGGCGGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGCGGCGGTAAAATACTCACGACCCGCTTAGGGTGAGAGGTGGGAGGACTTAGTATCAGCAGACGTTGAATCCTATTTAAGAGCT‑AGGTCTAAATGGGTTAGATGGGGTTGATAATATGACATCAGGTGGACTAAtt                  >  2:1320705/3‑239 (MQ=12)

                                                                                                                                                                                                                           agaACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCatgat                                                                                                                                                                                                             <  1:1840545/53‑1 (MQ=255)

                                                                                                                                                                                                                           agaACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCatgat                                                                                                                                                                                                             >  2:1840545/1‑53 (MQ=255)

                                                                                                                                                                                                                           agaACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGCCCCGATTGGGCTGAGAGGTGGATGGAGTAGGGATCAGGAACCGTTGAATCCCATACAAGTGAT‑AGACACAATGGGGTTAGAAGCCGTTGAGAATATGACCTCAGGGGGACTaaat                  >  2:1578960/1‑237 (MQ=25)

                                                                                                                                                                                                                           agaACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGt                                                                                                      >  1:1823147/1‑156 (MQ=255)

                                                                                                                                                                                                                           agaACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGa                                                                        >  2:638253/1‑186 (MQ=255)

                                                                                                                                                                                                                           agaACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAAtt                  >  1:421847/1‑239 (MQ=255)

                                                                                                                                                                                                                           agaACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAAtt                  >  1:1503049/1‑239 (MQ=255)

                                                                                                                                                                                                                                     ccACCTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTAt        <  1:1780307/238‑1 (MQ=255)

                                                                                                                                                                                                                                         cTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTATCTgg    <  1:1484573/239‑1 (MQ=255)

                                                                                                                                                                                                                                         cTGCCCCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTATCTgg    <  1:1163034/239‑1 (MQ=255)

                                                                                                                                                                                                                                         cTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTATCTgg    >  2:1743834/1‑239 (MQ=255)

GGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACT‑GCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGAT‑AGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTATCTGGTG  >  NC_007779/1530782‑1531254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`